prot_A-nodosum_M_contig1052.18.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1052.18.1
Unique Nameprot_A-nodosum_M_contig1052.18.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length293
Homology
BLAST of mRNA_A-nodosum_M_contig1052.18.1 vs. uniprot
Match: A0A6H5KWJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWJ3_9PHAE)

HSP 1 Score: 267 bits (683), Expect = 3.790e-85
Identity = 170/338 (50.30%), Postives = 209/338 (61.83%), Query Frame = 0
Query:    1 MRGVTYTIRSSLYVAVTNRCCTTSLIASRGPGLSMPTSFHPLSADVEPSVGEVLDNVTGRLSSSRETP----------FQEIVFAGVGEPLLRWPIVGEVVRSLRSHHAQLLQLPRSTEIAEEE----QVQPRGSAACTKPAEGAVPEESNYMPLRLVTNGLWPVAS---QAVVTPVPRSHSEG-PGMSTRGVEVNGGR----------------TGHESGFGFLYEGGADDAGALAA--------EIAELFDAVSVALNTADPLQYDQIMEPSIKGL-RPGS---AHAIVCSFVRECAARGLRTECTVVNRDDVDVTSARELATKLGACCRARPYLP 292
            MRG+TYTIRSSLYVAVTNRC TTSLIASRGPGL MP SFHPL ADVEPS  E+L +VT RLS S              F E+VFAGVGEPLLRWP+V +VV SLRS HA LL+ PRS E ++ +       P G AA T+P++  V      MP+RLVTNGLWPV +   Q V  P P + + G  G +   V+  G R                    +  G     G+ + GA+A+        +IAE+FD+VSVALNTADP QY ++M+PS+ GL   G+   AH  VC  V+ECA+RG+ TECTVV+R  VD+  ARELA  +GA CR RPY+P
Sbjct:    1 MRGITYTIRSSLYVAVTNRCSTTSLIASRGPGLLMPPSFHPLPADVEPSPVEILQDVTERLSGSGGGSGESLRAGGGLFDELVFAGVGEPLLRWPVVRDVVMSLRSRHANLLR-PRSAENSKVDGSGADATPTGGAATTRPSQDVV------MPIRLVTNGLWPVVAVDEQVVGPPSPEADTSGYTGEAKSNVDRQGRRRVGXXXXXXXXXFKVRAASGTSGGIADRSGSAERGAVASPSAASVAKQIAEVFDSVSVALNTADPAQYQELMKPSLDGLVEEGAGPVAHGYVCDLVKECASRGVATECTVVHRHGVDLRRARELAEAMGASCRVRPYVP 331          
BLAST of mRNA_A-nodosum_M_contig1052.18.1 vs. uniprot
Match: D8LHH4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHH4_ECTSI)

HSP 1 Score: 178 bits (452), Expect = 2.950e-51
Identity = 121/261 (46.36%), Postives = 153/261 (58.62%), Query Frame = 0
Query:   69 FQEIVFAGVGEPLLRWPIVGEVVRSLRSHHAQLLQLPRSTEIAEEEQVQPRGSAACTKPAEGAV---PEESNYMPLRLVTNGLWPVAS---QAVVTPVPRSH-SEGPGMSTRGVEVNGGRTGHESGF----------------GFLYEGGADDAGALAA--------EIAELFDAVSVALNTADPLQYDQIMEPSIKGLR------PGSAHAIVCSFVRECAARGLRTECTVVNRDDVDVTSARELATKLGACCRARPYLP 292
            F E+VFAGVGEPLLRWP+V +VV SLRS HA LL+ PRS E ++ +     GS+A   P  GA    P + + MP+RLVTNGLWPV +   Q V  P P +  S   G +   V+  G R    SG                 G     G+ + GA+A+        +IAE+FD+VSVALNTADP QY ++M PS  GL       PG AH+ VC  V+ECA+RG+ TECTVV+R  VD+  ARELA  +GA CR RPY+P
Sbjct:   11 FDELVFAGVGEPLLRWPVVRDVVMSLRSRHANLLR-PRSAENSKVD-----GSSADATPTGGAAATRPSQDDAMPIRLVTNGLWPVVAVDEQVVGPPSPEADTSRDIGEAKSNVDRQGRRRMGGSGGVGGGDFKVRAASGTSGGIADRSGSAERGAVASPSAASVARQIAEVFDSVSVALNTADPEQYQELMNPSPDGLLEEEGGGPG-AHSYVCDLVKECASRGVATECTVVDRHGVDLRRARELAEAMGASCRVRPYVP 264          
BLAST of mRNA_A-nodosum_M_contig1052.18.1 vs. uniprot
Match: A0A4D9DFL6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DFL6_9STRA)

HSP 1 Score: 120 bits (302), Expect = 1.710e-28
Identity = 101/324 (31.17%), Postives = 134/324 (41.36%), Query Frame = 0
Query:    4 VTYTIRSSLYVAVTNRCCTTSLIASRGPGLSMPTSFHPLSADVEPSVGEVLDNVTGRLSSSRET---PFQEIVFAGVGEPLLRWPIVGEVVRSLRSHHAQLLQLPRSTEIAEEEQVQPRGSAACTKPAEGAVPEESNYMPLRLVTNGLWPVASQAVVTPVPRSHSEGPGMSTRGVEVNGGRTGHESGFGFLYEGGADDAGALAAEIAELFDAVSVALNTADPLQYDQIMEPSIKGLRPGSAHAI--------------------------------VCSFVRECAARGLRTECTVVNRDDVDVTSARELATKLGACCRARPYLP 292
            +TY I+ +LYVAVTNRC T  L A+RGPG SM   F PL    EPS  E++ ++TG L++S       + E+ FAG GEP LRWP V  +   LR                 EE V  RG              E   + LRL TNGL  V  +                                              ++  ++AE F++V+VA+NTAD  QYD +M P +     G A A+                                V +FV+EC   G+ T+ T V R DVDV + R +A  +GA  R RPY P
Sbjct:   77 LTYWIKDTLYVAVTNRCNTVPLHATRGPGFSMG-DFSPLPPSYEPSEDELMASITGALAASHSLLNRAWTEVCFAGWGEPTLRWPTVLALAERLRH----------------EESVGKRG--------------EGGRLRLRLSTNGLGNVVQRK---------------------------------------------SIVRDVAEAFESVTVAVNTADASQYDSLMRPDLSMC--GDAEAMQPYTFSCTDQGGTEXXXXXXXXXXXXXETLGEVLAFVKECVGSGIDTQITAVARPDVDVEAVRSMAKGVGATFRERPYFP 322          
BLAST of mRNA_A-nodosum_M_contig1052.18.1 vs. uniprot
Match: A0A7S4CR33_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CR33_9EUGL)

HSP 1 Score: 95.9 bits (237), Expect = 3.750e-20
Identity = 51/104 (49.04%), Postives = 70/104 (67.31%), Query Frame = 0
Query:    1 MRGVTYTIRSSLYVAVTNRCCTTSLIASRGPGLSMPTSFHPLSADVEPSVGEVLDNVTGRLSSSRETPFQEIVFAGVGEPLLRWPIVGEVVRSLRSHHAQLLQL 104
            ++G+ YT+RSSLYVA+TN   T +L+ SRG G  M +SF PL A  EP+  +VL+ V    +  RE PF+ IVFAG GEP LR P++ EV R+L++  A  L+L
Sbjct:    4 VKGIVYTVRSSLYVALTNHSNTLTLLDSRGSGFKMNSSFEPLPAGFEPTASQVLEAVEAACNE-REPPFESIVFAGKGEPTLRLPVMLEVARALKAKGAMTLRL 106          
BLAST of mRNA_A-nodosum_M_contig1052.18.1 vs. uniprot
Match: I2CPP1_NANGC (Radical sam domain protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPP1_NANGC)

HSP 1 Score: 90.5 bits (223), Expect = 1.320e-17
Identity = 74/233 (31.76%), Postives = 99/233 (42.49%), Query Frame = 0
Query:    4 VTYTIRSSLYVAVTNRCCTTSLIASRGPGLSMPTSFHPLSADVEPSVGEVLDNVTGRLSSSRET---PFQEIVFAGVGEPLLRWPIVGEVVRSLRSHHAQLLQLPRSTEIAEEEQVQPRGSAACTKPAEGAVPEESNYMPLRLVTNGLWPVASQAVVTPVPRSHSEGPGMSTRGVEVNGGRTGHESGFGFLYEGGADDAGALAAEIAELFDAVSVALNTADPLQYDQIMEPSI 233
            +TY I+ +LYVAVTNRC T  L  +RGPG SM   F PL    EPS  E++ ++TG L++S       + E+ FAG GEP LRWP V  +   LR                 EE V  RG              E   + LRL TNGL  V  +                                              ++  ++AE F++V+VA+NTAD  QYD +M P +
Sbjct:  108 LTYWIKDTLYVAVTNRCNTVPLHVTRGPGFSMG-DFSPLPPSYEPSEDELMASITGALAASHSLLNRAWTEVCFAGWGEPTLRWPTVLALAERLRH----------------EESVGKRG--------------EGGRLRLRLSTNGLGNVVQRK---------------------------------------------SIVRDVAEAFESVTVAVNTADASQYDSLMRPDL 264          
BLAST of mRNA_A-nodosum_M_contig1052.18.1 vs. uniprot
Match: A0A835YXM5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXM5_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 1.060e-15
Identity = 53/120 (44.17%), Postives = 66/120 (55.00%), Query Frame = 0
Query:    4 VTYTIRSSLYVAVTNRCCTTSLIASRGPGLSMPTSFHPLSADVEPSVGEVLDNVTGRLS---SSRETP-------------------FQEIVFAGVGEPLLRWPIVGEVVRSLRSHHAQL 101
            +TY ++SSLYV+VTN   T +L ASRGPG  MP  F PL  D EPS  EVL+++T  LS   +S   P                   +QEIVFAG+GEP LRW +V     +LR  H  L
Sbjct:    6 ITYALKSSLYVSVTNLSNTITLPASRGPGFKMPAVFKPLPDDFEPSATEVLESLTKELSRQPTSLSCPRFFTNTQSNSPTFSLPAGAYQEIVFAGLGEPTLRWGVVRHAAEALRRSHPHL 125          
BLAST of mRNA_A-nodosum_M_contig1052.18.1 vs. uniprot
Match: W7UCC3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UCC3_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 4.770e-13
Identity = 42/85 (49.41%), Postives = 54/85 (63.53%), Query Frame = 0
Query:    4 VTYTIRSSLYVAVTNRCCTTSLIASRGPGLSMPTSFHPLSADVEPSVGEVLDNVTGRLSSSRET---PFQEIVFAGVGEPLLRWP 85
            +TY I+ +LYVAVTNRC T  L  +RGPG SM   F PL    EPS  E++ ++TG L++S       + E+ FAG GEP LRWP
Sbjct:   95 LTYWIKDTLYVAVTNRCNTVPLHVTRGPGFSMG-DFSPLPPSYEPSEDELMASITGALAASHSLLNRAWTEVCFAGWGEPTLRWP 178          
BLAST of mRNA_A-nodosum_M_contig1052.18.1 vs. uniprot
Match: A0A8J2SM46_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SM46_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 6.380e-12
Identity = 49/116 (42.24%), Postives = 59/116 (50.86%), Query Frame = 0
Query:    2 RGVTYTIRSSLYVAVTNRCCTTSLIASRGPGLSMPTS--FHPLSAD--VEPSVGEVLDNV---------------TGRLSSSRETPFQEIVFAGVGEPLLRWPIVGEVVRSLRSHH 98
            RGV Y + S LYV +TNR    SL+ASRGP   MP S  F PL A+  V+  V  VLD                 T R       P   + FAG+G+PLLRWP V E+ R +R HH
Sbjct:    9 RGVVYWLGSQLYVQLTNRARGLSLVASRGPAFQMPASSGFAPLEAEPTVDAVVAAVLDAYANDERKKALGQDVGRTRRADGGATDP--GVAFAGLGDPLLRWPDVAEITRRVREHH 122          
BLAST of mRNA_A-nodosum_M_contig1052.18.1 vs. uniprot
Match: A0A7S0SPP3_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SPP3_9CHLO)

HSP 1 Score: 65.5 bits (158), Expect = 1.210e-8
Identity = 38/79 (48.10%), Postives = 46/79 (58.23%), Query Frame = 0
Query:  213 VSVALNTADPLQYDQIMEPSIKGLRPGSAHAIVCSFVRECAARGLRTECTVVNRDDVDVTSARELATKLGAC-CRARPY 290
            V+VAL TADP QY+ +M+P          HA VC FV      G+  ECTVV    VDVT+AR+LA  LGA   RAR +
Sbjct:  207 VTVALATADPRQYEALMQPEAGS----GGHAAVCGFVVNLVEAGVEVECTVVKAPGVDVTAARQLAEALGAVEFRAREF 281          
BLAST of mRNA_A-nodosum_M_contig1052.18.1 vs. uniprot
Match: A0A7Y3L342_9BACT (Radical SAM protein n=1 Tax=Elusimicrobia bacterium TaxID=2030800 RepID=A0A7Y3L342_9BACT)

HSP 1 Score: 62.4 bits (150), Expect = 7.310e-8
Identity = 37/81 (45.68%), Postives = 47/81 (58.02%), Query Frame = 0
Query:  211 DAVSVALNTADPLQYDQIMEPSIKGLRPGSAHAIVCSFVRECAARGLRTECTVVNRDDVDVTSARELATKLGACCRARPYL 291
            D VSV++NTADP Q+  +  P  +    G A A  C+F  +CAA GLRT  T V+R DVD+ +   LA  LGA    RP L
Sbjct:  123 DRVSVSVNTADPAQWLTLHRPRPEYRAAGFAAA--CAFAADCAAAGLRTRVTAVDRPDVDLPAVEALARSLGAEFFLRPQL 201          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1052.18.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
A0A6H5KWJ3_9PHAE3.790e-8550.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHH4_ECTSI2.950e-5146.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A4D9DFL6_9STRA1.710e-2831.17Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S4CR33_9EUGL3.750e-2049.04Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
I2CPP1_NANGC1.320e-1731.76Radical sam domain protein (Fragment) n=1 Tax=Nann... [more]
A0A835YXM5_9STRA1.060e-1544.17Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7UCC3_9STRA4.770e-1349.41Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A8J2SM46_9STRA6.380e-1242.24Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S0SPP3_9CHLO1.210e-848.10Hypothetical protein n=1 Tax=Mantoniella antarctic... [more]
A0A7Y3L342_9BACT7.310e-845.68Radical SAM protein n=1 Tax=Elusimicrobia bacteriu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1052contigA-nodosum_M_contig1052:133193..139556 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1052.18.1mRNA_A-nodosum_M_contig1052.18.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1052 133148..139869 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1052.18.1 ID=prot_A-nodosum_M_contig1052.18.1|Name=mRNA_A-nodosum_M_contig1052.18.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=293bp
MRGVTYTIRSSLYVAVTNRCCTTSLIASRGPGLSMPTSFHPLSADVEPSV
GEVLDNVTGRLSSSRETPFQEIVFAGVGEPLLRWPIVGEVVRSLRSHHAQ
LLQLPRSTEIAEEEQVQPRGSAACTKPAEGAVPEESNYMPLRLVTNGLWP
VASQAVVTPVPRSHSEGPGMSTRGVEVNGGRTGHESGFGFLYEGGADDAG
ALAAEIAELFDAVSVALNTADPLQYDQIMEPSIKGLRPGSAHAIVCSFVR
ECAARGLRTECTVVNRDDVDVTSARELATKLGACCRARPYLP*
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