prot_A-nodosum_M_contig105.7.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig105.7.1
Unique Nameprot_A-nodosum_M_contig105.7.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length1023
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig105.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 512..533
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 573..593
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 364..395
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 977..1022
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 512..526

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig105contigA-nodosum_M_contig105:47480..50548 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig105.7.1mRNA_A-nodosum_M_contig105.7.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig105 47378..50919 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig105.7.1 ID=prot_A-nodosum_M_contig105.7.1|Name=mRNA_A-nodosum_M_contig105.7.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1023bp
METDERRCSDTGIADAAAPVHPLSITHDVHQTIQGRTRRGTFGLAKAADL
ARNDYISHDGRTRARALSLDSPPGFARGEFFAYPGNRPDQTSTGAKPLKE
EEQVVPILVPNLPTGPIRKEFAVMKETESPKSLENTARSLCASPEIQLTS
GGEGKNDKHCSISGLATSTTLTPSPIIASGTTHVHQTIHSLTRARVITRD
SAVDLVDNRISLARRTGARAIRFDSKVDLARINPSGYTGNQPNQASTGAR
RWEEDEQAVSRSFHHVPTAPTPNGVAVETKPASRESLGVVTDPRHTNRGR
TRARAASLGSAADLRRYDHTSHGPLIRTVAFSLDSTAGVARDKSSGYADN
KPNQALTGARRWKGDEQTVSRSFPSVPTAPAQNDPAVETKAGSRESLGDV
AGAFSGFPGVQLTSVRQGTGGKHRRGTRVATSATLIASPIISHATIYDAR
YPIVGRTRATPSSHGSTADVVRDDHTRHVLHTRARPLSLDSAACSLPAKH
LLYIGNQPKQALTDARRRKREEQGEPRSFQNVSTTFTKSNAVFKAKKEAQ
GSFGGVVVCPSPSGVQLISVRKGTDEKRPSGATHDTHGNTCRRPGASARC
HGSAVRLAHNEPFGGYMRSHLSQESGDTKPDKEEKYVISWCPLHANTASA
QRVVGVGTESELPGRLCNDHGIISVSSGGQLVSLGVGTGKRRPSRARVIW
SPDTGRPHQDAGEGVGTTTSVTVVSPPFLTRDATHRIRLTIRGKTRASDR
RHDSVADLERHEPRGYTYTGIQRNEDLNDTRSRNPEHVVRGYSRDVATVC
THKEPAVAMGAESLGFQGNVKRTISGLIDVQPTSPGGTTDERRADGTRDR
CAKIDKYKLDADAGVGTRIAISANPKLSPISTHGTKYDASHTSRNRPKTR
AFVPSLATGFTESWGVAGDQSLSGARGWNGHMEKGRGAVKVDLDADCVSE
HDDLIPEKEEEEEGHHGRIYLPDSRFVGTLGVNPDSNSGGHGEFPTDGGV
KPDNGKDDEALEYDMDDFEDYT*
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