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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 3542 |
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Cds size | 3069 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866425.055131-UTR-A-nodosum_M_contig105:47377..47479 | 1680866425.055131-UTR-A-nodosum_M_contig105:47377..47479 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig105 47378..47479 + |
| 1680866425.073942-UTR-A-nodosum_M_contig105:50548..50919 | 1680866425.073942-UTR-A-nodosum_M_contig105:50548..50919 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig105 50549..50919 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866425.0660973-CDS-A-nodosum_M_contig105:47479..50548 | 1680866425.0660973-CDS-A-nodosum_M_contig105:47479..50548 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig105 47480..50548 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig105.7.1 >prot_A-nodosum_M_contig105.7.1 ID=prot_A-nodosum_M_contig105.7.1|Name=mRNA_A-nodosum_M_contig105.7.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1023bp
METDERRCSDTGIADAAAPVHPLSITHDVHQTIQGRTRRGTFGLAKAADL
ARNDYISHDGRTRARALSLDSPPGFARGEFFAYPGNRPDQTSTGAKPLKE
EEQVVPILVPNLPTGPIRKEFAVMKETESPKSLENTARSLCASPEIQLTS
GGEGKNDKHCSISGLATSTTLTPSPIIASGTTHVHQTIHSLTRARVITRD
SAVDLVDNRISLARRTGARAIRFDSKVDLARINPSGYTGNQPNQASTGAR
RWEEDEQAVSRSFHHVPTAPTPNGVAVETKPASRESLGVVTDPRHTNRGR
TRARAASLGSAADLRRYDHTSHGPLIRTVAFSLDSTAGVARDKSSGYADN
KPNQALTGARRWKGDEQTVSRSFPSVPTAPAQNDPAVETKAGSRESLGDV
AGAFSGFPGVQLTSVRQGTGGKHRRGTRVATSATLIASPIISHATIYDAR
YPIVGRTRATPSSHGSTADVVRDDHTRHVLHTRARPLSLDSAACSLPAKH
LLYIGNQPKQALTDARRRKREEQGEPRSFQNVSTTFTKSNAVFKAKKEAQ
GSFGGVVVCPSPSGVQLISVRKGTDEKRPSGATHDTHGNTCRRPGASARC
HGSAVRLAHNEPFGGYMRSHLSQESGDTKPDKEEKYVISWCPLHANTASA
QRVVGVGTESELPGRLCNDHGIISVSSGGQLVSLGVGTGKRRPSRARVIW
SPDTGRPHQDAGEGVGTTTSVTVVSPPFLTRDATHRIRLTIRGKTRASDR
RHDSVADLERHEPRGYTYTGIQRNEDLNDTRSRNPEHVVRGYSRDVATVC
THKEPAVAMGAESLGFQGNVKRTISGLIDVQPTSPGGTTDERRADGTRDR
CAKIDKYKLDADAGVGTRIAISANPKLSPISTHGTKYDASHTSRNRPKTR
AFVPSLATGFTESWGVAGDQSLSGARGWNGHMEKGRGAVKVDLDADCVSE
HDDLIPEKEEEEEGHHGRIYLPDSRFVGTLGVNPDSNSGGHGEFPTDGGV
KPDNGKDDEALEYDMDDFEDYT* back to topmRNA from alignment at A-nodosum_M_contig105:47378..50919+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig105.7.1 ID=mRNA_A-nodosum_M_contig105.7.1|Name=mRNA_A-nodosum_M_contig105.7.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=3542bp|location=Sequence derived from alignment at A-nodosum_M_contig105:47378..50919+ (Ascophyllum nodosum dioecious)
AACGATGGTACTGTTGAGGCCGAAGCAGAGCCGAGGCGAAGCCTCGGCAA
CACTACGAGGAGTCCCTGTGCTTCTCCCGGGATACCGCTGACTTTAGTAG
GCATGGAGACGGATGAACGACGCTGCAGCGATACAGGAATCGCGGATGCT
GCGGCTCCCGTACATCCGCTTAGTATCACCCACGACGTTCACCAGACCAT
TCAAGGTCGAACGAGAAGGGGGACTTTTGGTCTTGCGAAGGCAGCAGACT
TGGCGCGAAACGACTACATCAGTCATGATGGTCGCACGAGAGCAAGAGCA
TTGAGTCTCGACTCGCCACCAGGCTTCGCACGAGGAGAGTTTTTTGCATA
TCCCGGTAATCGGCCCGATCAGACCTCGACTGGCGCAAAACCGTTGAAGG
AGGAGGAGCAGGTGGTGCCGATATTAGTCCCGAATCTTCCCACAGGCCCC
ATACGAAAGGAGTTTGCAGTCATGAAGGAAACAGAGTCCCCGAAGAGTCT
TGAGAACACAGCTCGGAGTCTCTGTGCCTCTCCTGAAATACAGCTGACTT
CAGGAGGCGAAGGGAAGAACGACAAACATTGCAGTATTAGTGGACTTGCG
ACCTCTACTACTCTGACACCGTCGCCTATTATTGCCAGCGGTACCACCCA
CGTTCATCAAACCATTCATAGTCTAACGAGAGCAAGAGTTATTACTCGCG
ACTCAGCAGTGGACTTGGTGGACAATCGCATCAGCCTTGCTCGTCGTACG
GGAGCAAGAGCGATACGTTTTGACTCGAAAGTGGACTTGGCGCGAATCAA
CCCTTCGGGATATACCGGTAACCAGCCAAATCAGGCCTCAACTGGCGCCA
GACGATGGGAAGAAGACGAACAGGCCGTATCACGATCCTTTCATCACGTT
CCTACAGCACCTACGCCAAATGGTGTTGCTGTTGAGACCAAACCAGCGTC
AAGGGAAAGCCTCGGCGTCGTAACAGACCCTCGCCACACCAACCGCGGTC
GAACGAGAGCAAGAGCTGCTAGTCTCGGCTCTGCAGCAGACTTGAGGCGA
TATGACCATACCAGCCATGGCCCTCTTATTAGAACAGTAGCCTTCAGCCT
CGACTCGACAGCGGGAGTAGCACGAGACAAGTCTTCGGGATACGCCGACA
ACAAGCCCAATCAGGCATTGACTGGTGCCAGACGATGGAAAGGGGATGAA
CAGACCGTGTCACGATCCTTCCCTAGCGTTCCTACAGCACCTGCACAAAA
TGATCCTGCTGTCGAGACCAAAGCAGGGTCGAGGGAAAGCCTCGGCGACG
TAGCAGGTGCATTTTCTGGTTTTCCTGGTGTACAGCTGACTTCAGTAAGG
CAGGGAACGGGGGGAAAACATCGCAGGGGTACCAGGGTCGCGACCTCTGC
GACTTTAATAGCGTCGCCTATAATCAGTCACGCCACCATTTACGATGCTC
GCTATCCTATCGTTGGTCGAACGAGAGCAACACCGAGTAGTCATGGTTCC
ACAGCAGACGTAGTGCGAGACGACCACACCCGCCATGTTCTTCACACGCG
AGCAAGACCGTTAAGTCTCGATTCGGCAGCATGTTCGCTTCCAGCCAAAC
ATTTGCTATACATTGGCAATCAGCCCAAGCAGGCTTTGACTGACGCTAGA
CGACGGAAACGGGAGGAGCAGGGCGAGCCACGATCCTTCCAGAACGTTAG
CACAACTTTCACGAAAAGTAATGCAGTTTTTAAGGCAAAGAAAGAAGCGC
AGGGTAGTTTTGGTGGCGTTGTGGTTTGTCCCTCTCCTTCCGGAGTACAG
CTGATTTCAGTACGCAAAGGCACAGATGAAAAACGTCCAAGTGGTGCCAC
CCACGACACTCATGGCAATACTTGTCGTCGACCAGGGGCAAGCGCCCGAT
GTCACGGTTCGGCAGTGCGTTTGGCGCACAACGAGCCTTTTGGGGGATAC
ATGAGAAGTCATCTCAGTCAGGAATCGGGTGACACCAAACCAGACAAAGA
AGAGAAATACGTAATATCATGGTGCCCTCTGCACGCTAACACGGCTAGCG
CACAAAGGGTTGTTGGTGTTGGGACGGAATCAGAATTACCAGGGAGACTT
TGTAATGATCATGGGATTATATCTGTTTCGTCTGGAGGACAGCTGGTTTC
ACTGGGTGTAGGTACGGGCAAAAGACGTCCCAGTCGCGCTAGGGTTATAT
GGAGCCCAGATACCGGTCGGCCTCACCAAGATGCTGGCGAGGGCGTCGGG
ACCACAACCTCTGTGACTGTGGTATCGCCTCCTTTTCTCACACGCGACGC
TACCCATCGAATACGCCTGACCATCCGCGGTAAGACACGAGCAAGCGACA
GACGTCACGACTCGGTAGCAGACTTAGAACGACACGAGCCTCGCGGATAT
ACATATACGGGGATCCAGCGCAATGAGGACTTGAATGATACAAGATCAAG
AAATCCCGAACACGTCGTACGAGGATACTCCCGAGACGTTGCCACAGTAT
GTACGCACAAGGAGCCCGCTGTTGCGATGGGAGCTGAGTCTCTGGGGTTT
CAAGGCAACGTGAAACGGACCATATCTGGTTTAATCGATGTACAGCCGAC
GTCGCCGGGGGGAACGACGGACGAAAGACGTGCTGATGGTACGAGAGATA
GATGTGCAAAAATAGACAAATATAAATTAGACGCAGATGCGGGCGTCGGC
ACCAGAATCGCGATCTCTGCGAATCCGAAATTGTCTCCTATCAGTACCCA
CGGTACCAAGTACGACGCAAGCCATACTAGCCGTAATCGACCGAAAACGA
GGGCTTTTGTGCCAAGTTTGGCAACGGGTTTTACGGAGTCTTGGGGGGTT
GCAGGCGATCAGAGCTTGAGTGGTGCCAGGGGATGGAATGGGCATATGGA
AAAGGGACGCGGGGCGGTAAAGGTGGATCTGGATGCGGACTGTGTTTCTG
AACACGACGACCTCATACCGGAGAAGGAGGAGGAGGAAGAGGGACACCAT
GGTCGCATTTATCTTCCTGACAGCAGGTTTGTTGGGACGCTAGGCGTAAA
CCCGGACAGCAACTCCGGGGGCCATGGCGAGTTCCCGACAGACGGCGGTG
TCAAACCCGATAATGGAAAGGACGATGAGGCGCTCGAGTATGACATGGAT
GATTTCGAAGACTACACCTAGCGCGAGGGACGTCCTGTGCTGCCACTCGA
ATTGCTCATGGGATGCAACAAGTGGCTTACAGGGTTTTCAGCTCAGTGTG
ACGTTTGTGTTCGATATTTGTTACCTCTCAACTCTCCCCCCGCAGGCACA
ATATTGATCGTCCGTGTTACCCGCGCAATTTGTTATGTCAGCGACCTCTT
GCCTTTTGTTCCTAACTATTAATAACTATTGGTACCGGGTTGTATGGATC
TATGATAGTCAGTTGATTTTATTATTAGTCTCCCGAAACAAAGCACGGAC
GCCCGGAGATCATTTGCCCTCAAGTCATAGTCACCCATTTTGTCCGTCTT
ATTAGTTTCCTGAGAAGGTTCTACTGCGGCTGTATTTTGAGC back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig105:47378..50919+ >mRNA_A-nodosum_M_contig105.7.1 ID=mRNA_A-nodosum_M_contig105.7.1|Name=mRNA_A-nodosum_M_contig105.7.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=3069bp|location=Sequence derived from alignment at A-nodosum_M_contig105:47378..50919+ (Ascophyllum nodosum dioecious)
ATGGAGACGGATGAACGACGCTGCAGCGATACAGGAATCGCGGATGCTGC
GGCTCCCGTACATCCGCTTAGTATCACCCACGACGTTCACCAGACCATTC
AAGGTCGAACGAGAAGGGGGACTTTTGGTCTTGCGAAGGCAGCAGACTTG
GCGCGAAACGACTACATCAGTCATGATGGTCGCACGAGAGCAAGAGCATT
GAGTCTCGACTCGCCACCAGGCTTCGCACGAGGAGAGTTTTTTGCATATC
CCGGTAATCGGCCCGATCAGACCTCGACTGGCGCAAAACCGTTGAAGGAG
GAGGAGCAGGTGGTGCCGATATTAGTCCCGAATCTTCCCACAGGCCCCAT
ACGAAAGGAGTTTGCAGTCATGAAGGAAACAGAGTCCCCGAAGAGTCTTG
AGAACACAGCTCGGAGTCTCTGTGCCTCTCCTGAAATACAGCTGACTTCA
GGAGGCGAAGGGAAGAACGACAAACATTGCAGTATTAGTGGACTTGCGAC
CTCTACTACTCTGACACCGTCGCCTATTATTGCCAGCGGTACCACCCACG
TTCATCAAACCATTCATAGTCTAACGAGAGCAAGAGTTATTACTCGCGAC
TCAGCAGTGGACTTGGTGGACAATCGCATCAGCCTTGCTCGTCGTACGGG
AGCAAGAGCGATACGTTTTGACTCGAAAGTGGACTTGGCGCGAATCAACC
CTTCGGGATATACCGGTAACCAGCCAAATCAGGCCTCAACTGGCGCCAGA
CGATGGGAAGAAGACGAACAGGCCGTATCACGATCCTTTCATCACGTTCC
TACAGCACCTACGCCAAATGGTGTTGCTGTTGAGACCAAACCAGCGTCAA
GGGAAAGCCTCGGCGTCGTAACAGACCCTCGCCACACCAACCGCGGTCGA
ACGAGAGCAAGAGCTGCTAGTCTCGGCTCTGCAGCAGACTTGAGGCGATA
TGACCATACCAGCCATGGCCCTCTTATTAGAACAGTAGCCTTCAGCCTCG
ACTCGACAGCGGGAGTAGCACGAGACAAGTCTTCGGGATACGCCGACAAC
AAGCCCAATCAGGCATTGACTGGTGCCAGACGATGGAAAGGGGATGAACA
GACCGTGTCACGATCCTTCCCTAGCGTTCCTACAGCACCTGCACAAAATG
ATCCTGCTGTCGAGACCAAAGCAGGGTCGAGGGAAAGCCTCGGCGACGTA
GCAGGTGCATTTTCTGGTTTTCCTGGTGTACAGCTGACTTCAGTAAGGCA
GGGAACGGGGGGAAAACATCGCAGGGGTACCAGGGTCGCGACCTCTGCGA
CTTTAATAGCGTCGCCTATAATCAGTCACGCCACCATTTACGATGCTCGC
TATCCTATCGTTGGTCGAACGAGAGCAACACCGAGTAGTCATGGTTCCAC
AGCAGACGTAGTGCGAGACGACCACACCCGCCATGTTCTTCACACGCGAG
CAAGACCGTTAAGTCTCGATTCGGCAGCATGTTCGCTTCCAGCCAAACAT
TTGCTATACATTGGCAATCAGCCCAAGCAGGCTTTGACTGACGCTAGACG
ACGGAAACGGGAGGAGCAGGGCGAGCCACGATCCTTCCAGAACGTTAGCA
CAACTTTCACGAAAAGTAATGCAGTTTTTAAGGCAAAGAAAGAAGCGCAG
GGTAGTTTTGGTGGCGTTGTGGTTTGTCCCTCTCCTTCCGGAGTACAGCT
GATTTCAGTACGCAAAGGCACAGATGAAAAACGTCCAAGTGGTGCCACCC
ACGACACTCATGGCAATACTTGTCGTCGACCAGGGGCAAGCGCCCGATGT
CACGGTTCGGCAGTGCGTTTGGCGCACAACGAGCCTTTTGGGGGATACAT
GAGAAGTCATCTCAGTCAGGAATCGGGTGACACCAAACCAGACAAAGAAG
AGAAATACGTAATATCATGGTGCCCTCTGCACGCTAACACGGCTAGCGCA
CAAAGGGTTGTTGGTGTTGGGACGGAATCAGAATTACCAGGGAGACTTTG
TAATGATCATGGGATTATATCTGTTTCGTCTGGAGGACAGCTGGTTTCAC
TGGGTGTAGGTACGGGCAAAAGACGTCCCAGTCGCGCTAGGGTTATATGG
AGCCCAGATACCGGTCGGCCTCACCAAGATGCTGGCGAGGGCGTCGGGAC
CACAACCTCTGTGACTGTGGTATCGCCTCCTTTTCTCACACGCGACGCTA
CCCATCGAATACGCCTGACCATCCGCGGTAAGACACGAGCAAGCGACAGA
CGTCACGACTCGGTAGCAGACTTAGAACGACACGAGCCTCGCGGATATAC
ATATACGGGGATCCAGCGCAATGAGGACTTGAATGATACAAGATCAAGAA
ATCCCGAACACGTCGTACGAGGATACTCCCGAGACGTTGCCACAGTATGT
ACGCACAAGGAGCCCGCTGTTGCGATGGGAGCTGAGTCTCTGGGGTTTCA
AGGCAACGTGAAACGGACCATATCTGGTTTAATCGATGTACAGCCGACGT
CGCCGGGGGGAACGACGGACGAAAGACGTGCTGATGGTACGAGAGATAGA
TGTGCAAAAATAGACAAATATAAATTAGACGCAGATGCGGGCGTCGGCAC
CAGAATCGCGATCTCTGCGAATCCGAAATTGTCTCCTATCAGTACCCACG
GTACCAAGTACGACGCAAGCCATACTAGCCGTAATCGACCGAAAACGAGG
GCTTTTGTGCCAAGTTTGGCAACGGGTTTTACGGAGTCTTGGGGGGTTGC
AGGCGATCAGAGCTTGAGTGGTGCCAGGGGATGGAATGGGCATATGGAAA
AGGGACGCGGGGCGGTAAAGGTGGATCTGGATGCGGACTGTGTTTCTGAA
CACGACGACCTCATACCGGAGAAGGAGGAGGAGGAAGAGGGACACCATGG
TCGCATTTATCTTCCTGACAGCAGGTTTGTTGGGACGCTAGGCGTAAACC
CGGACAGCAACTCCGGGGGCCATGGCGAGTTCCCGACAGACGGCGGTGTC
AAACCCGATAATGGAAAGGACGATGAGGCGCTCGAGTATGACATGGATGA
TTTCGAAGACTACACCTAG back to top
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