prot_A-nodosum_M_contig105.51.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig105.51.2
Unique Nameprot_A-nodosum_M_contig105.51.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length98
Homology
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BLAST of mRNA_A-nodosum_M_contig105.51.2 vs. uniprot
Match: A0A6H5JL89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL89_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 4.880e-36
Identity = 70/97 (72.16%), Postives = 78/97 (80.41%), Query Frame = 0 
Query:    1 MNTPTSALSPGSGVGAPRRQSAGSENGKGEVETNGIDRWAVAGEKLTADKKLTEDAKKDLVEDIISNLRRLLEDINEDNWMYDPIDLGYSSTGQQGR 97
            MNTPTSALSPGS VGA RRQS GSE GKGE E +G+D WA+ GEKLTA+K L EDAKK LV DI S+LRRL++DI+EDNWMYDPIDLG     Q GR
Sbjct:    1 MNTPTSALSPGSSVGASRRQSVGSE-GKGEAEAHGMDHWALVGEKLTAEKHLAEDAKKVLVSDIKSSLRRLMDDISEDNWMYDPIDLGQGH--QHGR 94
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BLAST of mRNA_A-nodosum_M_contig105.51.2 vs. uniprot
Match: D7FQD5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQD5_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 2.530e-18
Identity = 39/53 (73.58%), Postives = 46/53 (86.79%), Query Frame = 0 
Query:   36 IDRWAVAGEKLTADKKLTEDAKKDLVEDIISNLRRLLEDINEDNWMYDPIDLG 88
            +D WA+ GEKLTA+K L EDAKK LV DI S+LRRL++DI+EDNWMYDPIDLG
Sbjct:    1 MDHWALVGEKLTAEKHLAEDAKKVLVSDIKSSLRRLMDDISEDNWMYDPIDLG 53
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig105.51.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JL89_9PHAE4.880e-3672.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQD5_ECTSI2.530e-1873.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 58..78
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..36

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig105contigA-nodosum_M_contig105:565944..583024 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig105.51.2mRNA_A-nodosum_M_contig105.51.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig105 565911..584215 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig105.51.2 ID=prot_A-nodosum_M_contig105.51.2|Name=mRNA_A-nodosum_M_contig105.51.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=98bp
MNTPTSALSPGSGVGAPRRQSAGSENGKGEVETNGIDRWAVAGEKLTADK
KLTEDAKKDLVEDIISNLRRLLEDINEDNWMYDPIDLGYSSTGQQGR*
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