prot_A-nodosum_M_contig105.37.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig105.37.1
Unique Nameprot_A-nodosum_M_contig105.37.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length1604
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig105.37.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 975..998
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..90
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 148..164
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 337..353
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1402..1427
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 657..683
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1027..1041
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1380..1443
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1428..1443
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..78
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 835..854
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 832..911
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1178..1192
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 514..535
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1529..1603
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 584..624
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 864..878
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 889..911
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 794..818
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 947..998
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1193..1225
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 794..808
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 140..167
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 514..541
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 706..725
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1015..1049
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 588..602
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1548..1590
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 448..474
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 305..329
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 337..356
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 603..624
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1173..1276
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 286..330

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig105contigA-nodosum_M_contig105:461822..466934 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig105.37.1mRNA_A-nodosum_M_contig105.37.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig105 461783..468243 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig105.37.1 ID=prot_A-nodosum_M_contig105.37.1|Name=mRNA_A-nodosum_M_contig105.37.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1604bp
MIKGSDSTRRQDTGEIPEAATFSAFLSARSGTYGTAGDAGYINHGQRRIG
AFHPVSKASFVRDEPSENQGNQANQIPRDTRRGIKEGQAGQQYSQDATTV
TTQRGGMFATENQLPRDCFDVSVILSPDRRVQLTSIGIRPDEGRGSIAGA
TRSSSNTDQHSQGADGDTKVVEIVSPISQPTCTCSATDTGNHNNHGRART
SAFRPGSVALVRDEPLENTRKQLNYTSDSGDARRGEEGDCKVRQCSQCFF
TAPTQNDVAAGAEVHLPERNVDIMGSLFSSPEIQRTSGEKERRRSGARAI
KNSFDAGWSPQNTNGGTGAVSSTTPMLPPASTIGVLDDAGHKRRDRTRAR
FASHDSEANLATKELSGYESNQPNQVSCNARPKKRGGQAVSGCSQDFARA
CTRNKDDVATKPESPENLREITGSAFDFPGAQLTSGGVGPDGLRCRDART
TRRSLEVGRRPQDAGGGPEHTTSATSMTLPICTCGATDGGHTEQGQTKIN
YVRRGSNTYLELKEPSGYTDNPSNQASSGTINRRGKSEKPTLPICSQDYA
TVRTRMDVAVSATVESPGSSRHLKGDISSVSRVRLTSEGVESDGRRQNSA
RATKRFLDVNQSPQGAKNDTDATTSVTSMSPPTCTCGATNRDRMRVKTLS
HCLETDLGRKEPSGSAGHPFNQASKYDRRGRDEEHEVTRYSHDIANTCTR
NNDTVATKAESSESPSGITGSPCASSRLHPTLARVATDKICRGGARATRS
CPEVGHSAHAASGDTEATMYSTPMSPPECTCCAVDDASHTSRGRTKVSIS
RLDSEEDSTQEEPLGYAANSCYQTLRDARRGQVGNFEGMQSSQDSTTSRT
RKNVAVELPRSLGNSMESPYSSPGPQLDENRRNGGRATRSNSDADQFSQG
SREDTEAAMSAISTSPPICACGATKAGQSNRGRTRVNSRDSAAYLAREGS
SGYASNPSYQASRDARRRKEGKHNVTQNSQYFTPTRSPNKVAGTSKAGSQ
GSLCDITRISFNSPRLQLTSTGVGTDERRRSGAKTKRSSSEVGRRPQGVN
ESFTVATSVTPKSSLKCACCVTDDADHTSCGRARVNSTSRRSETDLAWRE
HSGNTSILSCQTSSDAIIGKKEQQSVSRRFRDAATARARKNSYVEANTES
QRSLCGATGCTSASPGVQLASVEVGTTVRRRDGAKSKRSSSDVTRRPQGT
SENTEAETAVTQVSMSTCTYHASDDAGHTSRSRTRLNSSSRGLRENYTRK
DHSVNTGNPSNQTSRDVRRYSEDEHEVPPCFEDSIIAHTRKDVAAETKIE
SPGGFGEATWGICDSPGAHLTSAGGRMDERLCDRTQVTRRSLKAQRCHQD
VIENTGAAKYVALISPPICTCGVTDDADHTSRDQSRENSLSSGSEANLAR
KDPWGYTDDRMSRVASDDKRGNEEEENLLQFSKNSTTARMRKTVTVASRT
DSPVSLGDTTGSPSVFPEVRPSVEEGTNKRRGSGWETTKSSDVGLFPQRA
GRGSEVATFVTSIQPSTCTCGATYDAGHNSRDRTRMTSLNRDSGPYSSLR
EPTRKKGIEFSRISTDTGRGEEDERRVQRGSRDLTQARRSGKVHGSHRRG
QGS*
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