prot_A-nodosum_M_contig105.26.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig105.26.1
Unique Nameprot_A-nodosum_M_contig105.26.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length136
Homology
BLAST of mRNA_A-nodosum_M_contig105.26.1 vs. uniprot
Match: D7FQ68_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ68_ECTSI)

HSP 1 Score: 226 bits (576), Expect = 2.750e-74
Identity = 118/135 (87.41%), Postives = 130/135 (96.30%), Query Frame = 0
Query:    1 MSSNVTVRTRKFIRNALLARRQMIVDIIHPGLANVSKSELGEMMAKKFRVSNAQTVSMFGIRTHYGGGKSTGFCLIYDSLEDMKKFEPRHRLVRAGLKEKKETSRKQIKEAKNRGKKIRGTGRRIAKHKAKKAAK 135
            MSSNVTVRTRKFIRNALLARRQM+VDIIHPG+ANVSK+ELGEM+AKKFRVS+A  V++FG RTH+GGGKSTGFCLIYDS+EDMKKFEP+HRL RAGL++KKETSRKQIKEAKNR KKIRGTGRRIAKHKAKKAAK
Sbjct:    1 MSSNVTVRTRKFIRNALLARRQMVVDIIHPGVANVSKTELGEMIAKKFRVSDATMVTLFGFRTHFGGGKSTGFCLIYDSVEDMKKFEPKHRLARAGLQDKKETSRKQIKEAKNRQKKIRGTGRRIAKHKAKKAAK 135          
BLAST of mRNA_A-nodosum_M_contig105.26.1 vs. uniprot
Match: A0A7S2US90_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2US90_9STRA)

HSP 1 Score: 190 bits (483), Expect = 4.220e-60
Identity = 102/131 (77.86%), Postives = 114/131 (87.02%), Query Frame = 0
Query:    5 VTVRTRKFIRNALLARRQMIVDIIHPGLANVSKSELGEMMAKKFRVSNAQTVSMFGIRTHYGGGKSTGFCLIYDSLEDMKKFEPRHRLVRAGLKEKKETSRKQIKEAKNRGKKIRGTGRRIAKHKAKKAAK 135
            VT+RTRKFIRNALL+RRQMIVD+IHPG ANV KSEL E +AK  +V++  TVS+FG RT +GG KSTGFCLIYDS+ED KKFEP+ RLVR GL EK ETSRKQIKEAKNRGKKIRGTGRRIA+HKAKKA K
Sbjct:    6 VTIRTRKFIRNALLSRRQMIVDVIHPGRANVPKSELQERLAKMHKVNDTTTVSLFGFRTAFGGNKSTGFCLIYDSVEDAKKFEPKFRLVRLGLAEKTETSRKQIKEAKNRGKKIRGTGRRIARHKAKKANK 136          
BLAST of mRNA_A-nodosum_M_contig105.26.1 vs. uniprot
Match: W7U6J8_9STRA (40S ribosomal protein S24 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6J8_9STRA)

HSP 1 Score: 179 bits (455), Expect = 8.250e-56
Identity = 95/131 (72.52%), Postives = 112/131 (85.50%), Query Frame = 0
Query:    5 VTVRTRKFIRNALLARRQMIVDIIHPGLANVSKSELGEMMAKKFRVSNAQTVSMFGIRTHYGGGKSTGFCLIYDSLEDMKKFEPRHRLVRAGLKEKKETSRKQIKEAKNRGKKIRGTGRRIAKHKAKKAAK 135
            VT+R+RKFIRNALLARRQMI+D++HPG ANV K+EL E+++   + +  +T  +FG RT +GGGKSTGF LIYD+LED KKFEP+HRLVRAGL  KKETSRKQIKEAKNR KKIRGTGRR+AKHKAKKA K
Sbjct:    7 VTIRSRKFIRNALLARRQMIIDVLHPGRANVPKTELQEIISGMHKGAKPETTFLFGFRTAFGGGKSTGFALIYDTLEDAKKFEPKHRLVRAGLVVKKETSRKQIKEAKNRAKKIRGTGRRLAKHKAKKANK 137          
BLAST of mRNA_A-nodosum_M_contig105.26.1 vs. uniprot
Match: F0YI50_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YI50_AURAN)

HSP 1 Score: 179 bits (454), Expect = 1.130e-55
Identity = 92/135 (68.15%), Postives = 113/135 (83.70%), Query Frame = 0
Query:    1 MSSNVTVRTRKFIRNALLARRQMIVDIIHPGLANVSKSELGEMMAKKFRVSNAQTVSMFGIRTHYGGGKSTGFCLIYDSLEDMKKFEPRHRLVRAGLKEKKETSRKQIKEAKNRGKKIRGTGRRIAKHKAKKAAK 135
            MS+ VT+RTRKF+RN LL R+Q ++D+IHP  ANV KSEL +M+AK  +V++ Q +S+FG R  +GGGKSTGFCLIYDS E  KK+EP++RL+R G+ EKKETSRKQIKEAKNR KK+RGTGRRIA HKAKKAAK
Sbjct:    1 MSAPVTIRTRKFVRNPLLQRKQFVLDVIHPDRANVPKSELQDMIAKSHKVADTQLISLFGFRNKFGGGKSTGFCLIYDSAEAAKKYEPKYRLIRNGIVEKKETSRKQIKEAKNRKKKVRGTGRRIANHKAKKAAK 135          
BLAST of mRNA_A-nodosum_M_contig105.26.1 vs. uniprot
Match: A0A7S2FWG9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FWG9_9STRA)

HSP 1 Score: 172 bits (436), Expect = 6.440e-53
Identity = 92/134 (68.66%), Postives = 108/134 (80.60%), Query Frame = 0
Query:    2 SSNVTVRTRKFIRNALLARRQMIVDIIHPGLANVSKSELGEMMAKKFRVSNAQTVSMFGIRTHYGGGKSTGFCLIYDSLEDMKKFEPRHRLVRAGLKEKKETSRKQIKEAKNRGKKIRGTGRRIAKHKAKKAAK 135
            SS VT+RTRKFIRNALL+RRQMIVD+IHPG ANV KSEL E++ K    ++   + + G  TH+GGGK+TGFC IYD++E  KKFEP+ R +R GL EK ETSRKQIKEAKN+ KKIRGTGRRIA HKAKKAAK
Sbjct:    4 SSTVTLRTRKFIRNALLSRRQMIVDVIHPGRANVPKSELQELLGKMHSCNDMSAIFLSGFLTHFGGGKTTGFCCIYDNIEAAKKFEPKFRCIRNGLMEKTETSRKQIKEAKNKRKKIRGTGRRIAAHKAKKAAK 137          
BLAST of mRNA_A-nodosum_M_contig105.26.1 vs. uniprot
Match: D0N827_PHYIT (40S ribosomal protein S24 n=14 Tax=Phytophthora TaxID=4783 RepID=D0N827_PHYIT)

HSP 1 Score: 171 bits (432), Expect = 2.530e-52
Identity = 87/131 (66.41%), Postives = 111/131 (84.73%), Query Frame = 0
Query:    5 VTVRTRKFIRNALLARRQMIVDIIHPGLANVSKSELGEMMAKKFRVSNAQTVSMFGIRTHYGGGKSTGFCLIYDSLEDMKKFEPRHRLVRAGLKEKKETSRKQIKEAKNRGKKIRGTGRRIAKHKAKKAAK 135
            VTVRTRKF+RN+LLARRQM+V++IHPG  NV K+EL E ++K ++V +A TV ++G RT +GGGKS+GF L+YD++ D K+FEP++RL+R GL EK ETSRKQIKEAKNRGKK+RG GRRIA+HKA KA K
Sbjct:    7 VTVRTRKFLRNSLLARRQMVVEVIHPGRPNVPKAELQEKISKMYKVKDANTVFLYGFRTQFGGGKSSGFGLVYDTVNDAKRFEPKYRLIRQGLVEKVETSRKQIKEAKNRGKKVRGVGRRIARHKAAKANK 137          
BLAST of mRNA_A-nodosum_M_contig105.26.1 vs. uniprot
Match: A0A0P5B3P7_9CRUS (40S ribosomal protein S24 n=3 Tax=Eukaryota TaxID=2759 RepID=A0A0P5B3P7_9CRUS)

HSP 1 Score: 169 bits (428), Expect = 1.060e-51
Identity = 91/132 (68.94%), Postives = 109/132 (82.58%), Query Frame = 0
Query:    5 VTVRTRKFIRNALLARRQMIVDIIHPGLANVSKSELGEMMAKKFRVSNAQTVSMFGIRTHYGGGKSTGFCLIYDSLEDMKKFEPRHRLVRAGLKEKKETSRKQIKEAKNRG-KKIRGTGRRIAKHKAKKAAK 135
            VTVRTRKF+RNALLARRQM+V++IHPG  NV K+EL E +AK ++V +A TV ++G RT +GGGKS+GFCLIYDS+ D K+FEP+HRLVR GL +K ETSRKQIKEAKNR  K  RG GRRIA+HKA KA K
Sbjct:    7 VTVRTRKFLRNALLARRQMLVEVIHPGRPNVPKAELQEKVAKMYKVKDATTVFLYGFRTAFGGGKSSGFCLIYDSINDAKRFEPKHRLVRQGLADKVETSRKQIKEAKNRALKNPRGVGRRIARHKANKANK 138          
BLAST of mRNA_A-nodosum_M_contig105.26.1 vs. uniprot
Match: W4GRV1_9STRA (40S ribosomal protein S24 n=6 Tax=Saprolegniaceae TaxID=4764 RepID=W4GRV1_9STRA)

HSP 1 Score: 169 bits (427), Expect = 1.460e-51
Identity = 87/131 (66.41%), Postives = 108/131 (82.44%), Query Frame = 0
Query:    5 VTVRTRKFIRNALLARRQMIVDIIHPGLANVSKSELGEMMAKKFRVSNAQTVSMFGIRTHYGGGKSTGFCLIYDSLEDMKKFEPRHRLVRAGLKEKKETSRKQIKEAKNRGKKIRGTGRRIAKHKAKKAAK 135
            VTVRTRKF+RN LLARRQM+VD++HPG  NV K+EL E +AK ++V++  TV ++G RT +GGGKS+GF LIYD++ D KKFEP++RLVR GL EK E SRKQIKE+KNR KK+RG GRRIA+HKA KA K
Sbjct:    7 VTVRTRKFLRNTLLARRQMLVDVLHPGRPNVPKAELQEKLAKMYKVADTNTVFLYGFRTAFGGGKSSGFALIYDTVNDAKKFEPKYRLVRQGLSEKVEKSRKQIKESKNRAKKVRGVGRRIARHKANKANK 137          
BLAST of mRNA_A-nodosum_M_contig105.26.1 vs. uniprot
Match: A0A7S3GRG0_9STRA (40S ribosomal protein S24 n=2 Tax=Eukaryota TaxID=2759 RepID=A0A7S3GRG0_9STRA)

HSP 1 Score: 169 bits (427), Expect = 1.510e-51
Identity = 89/130 (68.46%), Postives = 107/130 (82.31%), Query Frame = 0
Query:    5 VTVRTRKFIRNALLARRQMIVDIIHPGLANVSKSELGEMMAKKFRVSNAQTVSMFGIRTHYGGGKSTGFCLIYDSLEDMKKFEPRHRLVRAGLKEKKETSRKQIKEAKNRGKKIRGTGRRIAKHKAKKAA 134
            V +RTRKFIRNALLARRQ +VDIIHPG ANVSK+EL E + + F+VS +  + +FG RT +GGG+STGF LIYD+LE  KKFEP+HRL R GL++K+E SRKQIKE KNRGKK+ G GRRIA+HKAKK A
Sbjct:    8 VQIRTRKFIRNALLARRQFVVDIIHPGRANVSKTELQEKIGQLFKVSESNLIYLFGFRTVFGGGRSTGFALIYDNLESAKKFEPKHRLARNGLEKKREGSRKQIKEKKNRGKKVWGVGRRIARHKAKKNA 137          
BLAST of mRNA_A-nodosum_M_contig105.26.1 vs. uniprot
Match: A0A6T5Y5Q7_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A6T5Y5Q7_9STRA)

HSP 1 Score: 168 bits (426), Expect = 2.010e-51
Identity = 89/132 (67.42%), Postives = 108/132 (81.82%), Query Frame = 0
Query:    3 SNVTVRTRKFIRNALLARRQMIVDIIHPGLANVSKSELGEMMAKKFRVSNAQTVSMFGIRTHYGGGKSTGFCLIYDSLEDMKKFEPRHRLVRAGLKEKKETSRKQIKEAKNRGKKIRGTGRRIAKHKAKKAA 134
            S V V+TRKF +N LLARRQ IVDI+HPG ANV KSEL E++A  ++V++ + VS+F  RT +GGGKSTGFC+IYD++E ++KFEP HR VR G  EKKETSRK IKEAKN+GKKIRGTG  IAKHKAK+AA
Sbjct:    2 SAVVVKTRKFKKNPLLARRQFIVDILHPGRANVPKSELQEVVAGMYKVNDPKLVSLFSFRTKFGGGKSTGFCVIYDNMESLRKFEPTHRQVRGGFVEKKETSRKAIKEAKNKGKKIRGTGASIAKHKAKRAA 133          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig105.26.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQ68_ECTSI2.750e-7487.41Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2US90_9STRA4.220e-6077.86Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
W7U6J8_9STRA8.250e-5672.5240S ribosomal protein S24 n=2 Tax=Monodopsidaceae ... [more]
F0YI50_AURAN1.130e-5568.15Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S2FWG9_9STRA6.440e-5368.66Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
D0N827_PHYIT2.530e-5266.4140S ribosomal protein S24 n=14 Tax=Phytophthora Ta... [more]
A0A0P5B3P7_9CRUS1.060e-5168.9440S ribosomal protein S24 n=3 Tax=Eukaryota TaxID=... [more]
W4GRV1_9STRA1.460e-5166.4140S ribosomal protein S24 n=6 Tax=Saprolegniaceae ... [more]
A0A7S3GRG0_9STRA1.510e-5168.4640S ribosomal protein S24 n=2 Tax=Eukaryota TaxID=... [more]
A0A6T5Y5Q7_9STRA2.010e-5167.42Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 94..114
NoneNo IPR availableGENE3D3.30.70.3370coord: 1..135
e-value: 2.1E-49
score: 168.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 110..135
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 99..135
IPR001976Ribosomal protein S24ePFAMPF01282Ribosomal_S24ecoord: 25..102
e-value: 4.1E-31
score: 106.8
IPR001976Ribosomal protein S24ePANTHERPTHR1049640S RIBOSOMAL PROTEIN S24coord: 1..129
IPR001976Ribosomal protein S24eHAMAPMF_00545Ribosomal_S24ecoord: 3..105
score: 17.334742
IPR012678Ribosomal protein L23/L15e core domain superfamilySUPERFAMILY54189Ribosomal proteins S24e, L23 and L15ecoord: 5..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig105contigA-nodosum_M_contig105:362763..374849 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig105.26.1mRNA_A-nodosum_M_contig105.26.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig105 362763..374849 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig105.26.1 ID=prot_A-nodosum_M_contig105.26.1|Name=mRNA_A-nodosum_M_contig105.26.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=136bp
MSSNVTVRTRKFIRNALLARRQMIVDIIHPGLANVSKSELGEMMAKKFRV
SNAQTVSMFGIRTHYGGGKSTGFCLIYDSLEDMKKFEPRHRLVRAGLKEK
KETSRKQIKEAKNRGKKIRGTGRRIAKHKAKKAAK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001976Ribosomal_S24e
IPR012678Ribosomal_L23/L15e_core_dom_sf