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Homology
BLAST of mRNA_A-nodosum_M_contig105.26.1 vs. uniprot
Match: D7FQ68_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ68_ECTSI) HSP 1 Score: 226 bits (576), Expect = 2.750e-74 Identity = 118/135 (87.41%), Postives = 130/135 (96.30%), Query Frame = 1
Query: 1 MSSNVTVRTRKFIRNALLARRQMIVDIIHPGLANVSKSELGEMMAKKFRVSNAQTVSMFGIRTHYGGGKSTGFCLIYDSLEDMKKFEPRHRLVRAGLKEKKETSRKQIKEAKNRGKKIRGTGRRIAKHKAKKAAK 405
MSSNVTVRTRKFIRNALLARRQM+VDIIHPG+ANVSK+ELGEM+AKKFRVS+A V++FG RTH+GGGKSTGFCLIYDS+EDMKKFEP+HRL RAGL++KKETSRKQIKEAKNR KKIRGTGRRIAKHKAKKAAK
Sbjct: 1 MSSNVTVRTRKFIRNALLARRQMVVDIIHPGVANVSKTELGEMIAKKFRVSDATMVTLFGFRTHFGGGKSTGFCLIYDSVEDMKKFEPKHRLARAGLQDKKETSRKQIKEAKNRQKKIRGTGRRIAKHKAKKAAK 135
BLAST of mRNA_A-nodosum_M_contig105.26.1 vs. uniprot
Match: A0A7S2US90_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2US90_9STRA) HSP 1 Score: 190 bits (483), Expect = 4.220e-60 Identity = 102/131 (77.86%), Postives = 114/131 (87.02%), Query Frame = 1
Query: 13 VTVRTRKFIRNALLARRQMIVDIIHPGLANVSKSELGEMMAKKFRVSNAQTVSMFGIRTHYGGGKSTGFCLIYDSLEDMKKFEPRHRLVRAGLKEKKETSRKQIKEAKNRGKKIRGTGRRIAKHKAKKAAK 405
VT+RTRKFIRNALL+RRQMIVD+IHPG ANV KSEL E +AK +V++ TVS+FG RT +GG KSTGFCLIYDS+ED KKFEP+ RLVR GL EK ETSRKQIKEAKNRGKKIRGTGRRIA+HKAKKA K
Sbjct: 6 VTIRTRKFIRNALLSRRQMIVDVIHPGRANVPKSELQERLAKMHKVNDTTTVSLFGFRTAFGGNKSTGFCLIYDSVEDAKKFEPKFRLVRLGLAEKTETSRKQIKEAKNRGKKIRGTGRRIARHKAKKANK 136
BLAST of mRNA_A-nodosum_M_contig105.26.1 vs. uniprot
Match: W7U6J8_9STRA (40S ribosomal protein S24 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6J8_9STRA) HSP 1 Score: 179 bits (455), Expect = 8.250e-56 Identity = 95/131 (72.52%), Postives = 112/131 (85.50%), Query Frame = 1
Query: 13 VTVRTRKFIRNALLARRQMIVDIIHPGLANVSKSELGEMMAKKFRVSNAQTVSMFGIRTHYGGGKSTGFCLIYDSLEDMKKFEPRHRLVRAGLKEKKETSRKQIKEAKNRGKKIRGTGRRIAKHKAKKAAK 405
VT+R+RKFIRNALLARRQMI+D++HPG ANV K+EL E+++ + + +T +FG RT +GGGKSTGF LIYD+LED KKFEP+HRLVRAGL KKETSRKQIKEAKNR KKIRGTGRR+AKHKAKKA K
Sbjct: 7 VTIRSRKFIRNALLARRQMIIDVLHPGRANVPKTELQEIISGMHKGAKPETTFLFGFRTAFGGGKSTGFALIYDTLEDAKKFEPKHRLVRAGLVVKKETSRKQIKEAKNRAKKIRGTGRRLAKHKAKKANK 137
BLAST of mRNA_A-nodosum_M_contig105.26.1 vs. uniprot
Match: F0YI50_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YI50_AURAN) HSP 1 Score: 179 bits (454), Expect = 1.130e-55 Identity = 92/135 (68.15%), Postives = 113/135 (83.70%), Query Frame = 1
Query: 1 MSSNVTVRTRKFIRNALLARRQMIVDIIHPGLANVSKSELGEMMAKKFRVSNAQTVSMFGIRTHYGGGKSTGFCLIYDSLEDMKKFEPRHRLVRAGLKEKKETSRKQIKEAKNRGKKIRGTGRRIAKHKAKKAAK 405
MS+ VT+RTRKF+RN LL R+Q ++D+IHP ANV KSEL +M+AK +V++ Q +S+FG R +GGGKSTGFCLIYDS E KK+EP++RL+R G+ EKKETSRKQIKEAKNR KK+RGTGRRIA HKAKKAAK
Sbjct: 1 MSAPVTIRTRKFVRNPLLQRKQFVLDVIHPDRANVPKSELQDMIAKSHKVADTQLISLFGFRNKFGGGKSTGFCLIYDSAEAAKKYEPKYRLIRNGIVEKKETSRKQIKEAKNRKKKVRGTGRRIANHKAKKAAK 135
BLAST of mRNA_A-nodosum_M_contig105.26.1 vs. uniprot
Match: A0A7S2FWG9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FWG9_9STRA) HSP 1 Score: 172 bits (436), Expect = 6.440e-53 Identity = 92/134 (68.66%), Postives = 108/134 (80.60%), Query Frame = 1
Query: 4 SSNVTVRTRKFIRNALLARRQMIVDIIHPGLANVSKSELGEMMAKKFRVSNAQTVSMFGIRTHYGGGKSTGFCLIYDSLEDMKKFEPRHRLVRAGLKEKKETSRKQIKEAKNRGKKIRGTGRRIAKHKAKKAAK 405
SS VT+RTRKFIRNALL+RRQMIVD+IHPG ANV KSEL E++ K ++ + + G TH+GGGK+TGFC IYD++E KKFEP+ R +R GL EK ETSRKQIKEAKN+ KKIRGTGRRIA HKAKKAAK
Sbjct: 4 SSTVTLRTRKFIRNALLSRRQMIVDVIHPGRANVPKSELQELLGKMHSCNDMSAIFLSGFLTHFGGGKTTGFCCIYDNIEAAKKFEPKFRCIRNGLMEKTETSRKQIKEAKNKRKKIRGTGRRIAAHKAKKAAK 137
BLAST of mRNA_A-nodosum_M_contig105.26.1 vs. uniprot
Match: D0N827_PHYIT (40S ribosomal protein S24 n=14 Tax=Phytophthora TaxID=4783 RepID=D0N827_PHYIT) HSP 1 Score: 171 bits (432), Expect = 2.530e-52 Identity = 87/131 (66.41%), Postives = 111/131 (84.73%), Query Frame = 1
Query: 13 VTVRTRKFIRNALLARRQMIVDIIHPGLANVSKSELGEMMAKKFRVSNAQTVSMFGIRTHYGGGKSTGFCLIYDSLEDMKKFEPRHRLVRAGLKEKKETSRKQIKEAKNRGKKIRGTGRRIAKHKAKKAAK 405
VTVRTRKF+RN+LLARRQM+V++IHPG NV K+EL E ++K ++V +A TV ++G RT +GGGKS+GF L+YD++ D K+FEP++RL+R GL EK ETSRKQIKEAKNRGKK+RG GRRIA+HKA KA K
Sbjct: 7 VTVRTRKFLRNSLLARRQMVVEVIHPGRPNVPKAELQEKISKMYKVKDANTVFLYGFRTQFGGGKSSGFGLVYDTVNDAKRFEPKYRLIRQGLVEKVETSRKQIKEAKNRGKKVRGVGRRIARHKAAKANK 137
BLAST of mRNA_A-nodosum_M_contig105.26.1 vs. uniprot
Match: A0A0P5B3P7_9CRUS (40S ribosomal protein S24 n=3 Tax=Eukaryota TaxID=2759 RepID=A0A0P5B3P7_9CRUS) HSP 1 Score: 169 bits (428), Expect = 1.060e-51 Identity = 91/132 (68.94%), Postives = 109/132 (82.58%), Query Frame = 1
Query: 13 VTVRTRKFIRNALLARRQMIVDIIHPGLANVSKSELGEMMAKKFRVSNAQTVSMFGIRTHYGGGKSTGFCLIYDSLEDMKKFEPRHRLVRAGLKEKKETSRKQIKEAKNRG-KKIRGTGRRIAKHKAKKAAK 405
VTVRTRKF+RNALLARRQM+V++IHPG NV K+EL E +AK ++V +A TV ++G RT +GGGKS+GFCLIYDS+ D K+FEP+HRLVR GL +K ETSRKQIKEAKNR K RG GRRIA+HKA KA K
Sbjct: 7 VTVRTRKFLRNALLARRQMLVEVIHPGRPNVPKAELQEKVAKMYKVKDATTVFLYGFRTAFGGGKSSGFCLIYDSINDAKRFEPKHRLVRQGLADKVETSRKQIKEAKNRALKNPRGVGRRIARHKANKANK 138
BLAST of mRNA_A-nodosum_M_contig105.26.1 vs. uniprot
Match: W4GRV1_9STRA (40S ribosomal protein S24 n=6 Tax=Saprolegniaceae TaxID=4764 RepID=W4GRV1_9STRA) HSP 1 Score: 169 bits (427), Expect = 1.460e-51 Identity = 87/131 (66.41%), Postives = 108/131 (82.44%), Query Frame = 1
Query: 13 VTVRTRKFIRNALLARRQMIVDIIHPGLANVSKSELGEMMAKKFRVSNAQTVSMFGIRTHYGGGKSTGFCLIYDSLEDMKKFEPRHRLVRAGLKEKKETSRKQIKEAKNRGKKIRGTGRRIAKHKAKKAAK 405
VTVRTRKF+RN LLARRQM+VD++HPG NV K+EL E +AK ++V++ TV ++G RT +GGGKS+GF LIYD++ D KKFEP++RLVR GL EK E SRKQIKE+KNR KK+RG GRRIA+HKA KA K
Sbjct: 7 VTVRTRKFLRNTLLARRQMLVDVLHPGRPNVPKAELQEKLAKMYKVADTNTVFLYGFRTAFGGGKSSGFALIYDTVNDAKKFEPKYRLVRQGLSEKVEKSRKQIKESKNRAKKVRGVGRRIARHKANKANK 137
BLAST of mRNA_A-nodosum_M_contig105.26.1 vs. uniprot
Match: A0A7S3GRG0_9STRA (40S ribosomal protein S24 n=2 Tax=Eukaryota TaxID=2759 RepID=A0A7S3GRG0_9STRA) HSP 1 Score: 169 bits (427), Expect = 1.510e-51 Identity = 89/130 (68.46%), Postives = 107/130 (82.31%), Query Frame = 1
Query: 13 VTVRTRKFIRNALLARRQMIVDIIHPGLANVSKSELGEMMAKKFRVSNAQTVSMFGIRTHYGGGKSTGFCLIYDSLEDMKKFEPRHRLVRAGLKEKKETSRKQIKEAKNRGKKIRGTGRRIAKHKAKKAA 402
V +RTRKFIRNALLARRQ +VDIIHPG ANVSK+EL E + + F+VS + + +FG RT +GGG+STGF LIYD+LE KKFEP+HRL R GL++K+E SRKQIKE KNRGKK+ G GRRIA+HKAKK A
Sbjct: 8 VQIRTRKFIRNALLARRQFVVDIIHPGRANVSKTELQEKIGQLFKVSESNLIYLFGFRTVFGGGRSTGFALIYDNLESAKKFEPKHRLARNGLEKKREGSRKQIKEKKNRGKKVWGVGRRIARHKAKKNA 137
BLAST of mRNA_A-nodosum_M_contig105.26.1 vs. uniprot
Match: A0A6T5Y5Q7_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A6T5Y5Q7_9STRA) HSP 1 Score: 168 bits (426), Expect = 2.010e-51 Identity = 89/132 (67.42%), Postives = 108/132 (81.82%), Query Frame = 1
Query: 7 SNVTVRTRKFIRNALLARRQMIVDIIHPGLANVSKSELGEMMAKKFRVSNAQTVSMFGIRTHYGGGKSTGFCLIYDSLEDMKKFEPRHRLVRAGLKEKKETSRKQIKEAKNRGKKIRGTGRRIAKHKAKKAA 402
S V V+TRKF +N LLARRQ IVDI+HPG ANV KSEL E++A ++V++ + VS+F RT +GGGKSTGFC+IYD++E ++KFEP HR VR G EKKETSRK IKEAKN+GKKIRGTG IAKHKAK+AA
Sbjct: 2 SAVVVKTRKFKKNPLLARRQFIVDILHPGRANVPKSELQEVVAGMYKVNDPKLVSLFSFRTKFGGGKSTGFCVIYDNMESLRKFEPTHRQVRGGFVEKKETSRKAIKEAKNKGKKIRGTGASIAKHKAKRAA 133
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 2880.D7FQ68 |
| Preferred name | RPS24 |
| PFAMs | Ribosomal_S24e |
| Model size | 408 |
| Max annot lvl | 2759|Eukaryota |
| KEGG rclass | RC00002,RC02878 |
| KEGG ko | ko:K01008,ko:K02974,ko:K17338 |
| KEGG Reaction | R03595 |
| KEGG Pathway | ko00450,ko01100,ko03010,map00450,map01100,map03010 |
| KEGG Module | M00177,M00179 |
| Hectar predicted targeting category | mitochondrion |
| GOs | GO:0000184,GO:0000462,GO:0000956,GO:0001889,GO:0002181,GO:0002182,GO:0002262,GO:0002376,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005739,GO:0005773,GO:0005774,GO:0005829,GO:0005840,GO:0005844,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006414,GO:0006518,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0007275,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009507,GO:0009536,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0015031,GO:0015833,GO:0015935,GO:0016020,GO:0016070,GO:0016071,GO:0016072,GO:0019222,GO:0019439,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030312,GO:0030490,GO:0031090,GO:0031099,GO:0031100,GO:0031369,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0033365,GO:0034101,GO:0034470,GO:0034613,GO:0034641,GO:0034645,GO:0034655,GO:0034660,GO:0042254,GO:0042274,GO:0042592,GO:0042788,GO:0042886,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044428,GO:0044437,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0045047,GO:0045184,GO:0046483,GO:0046700,GO:0046907,GO:0048513,GO:0048519,GO:0048731,GO:0048732,GO:0048856,GO:0048872,GO:0050789,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0060255,GO:0061008,GO:0065007,GO:0065008,GO:0070013,GO:0070727,GO:0070972,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:0090304,GO:0097159,GO:0097421,GO:0098588,GO:0098805,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1990904 |
| Exons | 4 |
| Evalue | 4.51e-75 |
| EggNOG OGs | COG2004@1|root,KOG3424@2759|Eukaryota |
| Ec32 ortholog description | Ribosomal protein S24e |
| Ec32 ortholog | Ec-01_007240.1 |
| EC | 2.7.9.3 |
| Description | structural constituent of ribosome |
| Cds size | 408 |
| COG category | J |
| BRITE | br01610,ko00000,ko00001,ko00002,ko01000,ko03011,ko03016 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680866426.3999724-CDS-A-nodosum_M_contig105:362762..362876 | 1680866426.3999724-CDS-A-nodosum_M_contig105:362762..362876 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig105 362763..362876 - |
| 1680866426.4190614-CDS-A-nodosum_M_contig105:363061..363217 | 1680866426.4190614-CDS-A-nodosum_M_contig105:363061..363217 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig105 363062..363217 - |
| 1680866426.4801707-CDS-A-nodosum_M_contig105:373583..373652 | 1680866426.4801707-CDS-A-nodosum_M_contig105:373583..373652 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig105 373584..373652 - |
| 1680866426.4886003-CDS-A-nodosum_M_contig105:374780..374849 | 1680866426.4886003-CDS-A-nodosum_M_contig105:374780..374849 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig105 374781..374849 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig105.26.1 >prot_A-nodosum_M_contig105.26.1 ID=prot_A-nodosum_M_contig105.26.1|Name=mRNA_A-nodosum_M_contig105.26.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=136bp
MSSNVTVRTRKFIRNALLARRQMIVDIIHPGLANVSKSELGEMMAKKFRV SNAQTVSMFGIRTHYGGGKSTGFCLIYDSLEDMKKFEPRHRLVRAGLKEK KETSRKQIKEAKNRGKKIRGTGRRIAKHKAKKAAK* back to topmRNA from alignment at A-nodosum_M_contig105:362763..374849- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig105.26.1 ID=mRNA_A-nodosum_M_contig105.26.1|Name=mRNA_A-nodosum_M_contig105.26.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=12087bp|location=Sequence derived from alignment at A-nodosum_M_contig105:362763..374849- (Ascophyllum nodosum dioecious) ATGTCTTCTAACGTGACCGTGCGCACGCGGAAATTCATTCGGAATGCCCT
GCTTGCAAGGAGACAGATGGTGAGATGTCACTTGTGGACGACAACCGATA
AGCGCTCTGGGTAGGTTGTGGATTTGGTTGGACGAGAGGAAGCTTCATAA
GGGCCGAATACACAGCGGTGCCGTCTCAGCTGTAGGGGGTGACTGCTGCC
CTTGCCCGATATATATTCGCCCATGAGCTCACTTTAGAGGTCCTGATGAA
GGTAAACGGATAGTTTACGCCTACACTCGACAACATGGAGAGCTGTTTAT
AGAGCGCCCGATTAAGGCCTACCAAAATCCCCAGTACGTAGGGCCGGGCA
CCGAGGCACTTTCCCACAATAACAGGGTTAGCGTGCTGCCTATCGTCCGT
TAGGACGCAGTGCGCTTGAACGAGCGTCAGGAAATGAAGTGCCTATTTTA
CTAGAAGGCTCCTGCGCCATTTGTTTTGTGTCCAACTAAATGAGTAGTTG
TATCGTACGATTCTAGTTCGTTGTTGGTGATGAGGATCGACTTGAAAACA
CTGTATGGCGTAATACAGACATCAGTACTTACTCGAGTCGTAAAACACAG
TATATTAGTTGCACTCTCTTTCACCAGGTATGTTGGGACGGCGGCAGCGA
CCGCCAGACTGTACATTTTGTACTGTTGTATTTATATTGTAGTACCTTTT
TCTTCGCAAATGCACGTATAGACTCCTGTAAAGCCCACCGGCGGGCAATA
CAAGAATTAGTTAAACCTACGCCCTCCGTCGCCGAGAAGAATGCCGTGCC
ACGACGACTCGCATGTATGGTAATGACGGTCAAAGATTCTGAAAACACAC
ACTCTATAATAGAAGCGATGGACACACTCATTCGTTGTACTCAATGAAGC
TTTCGCCTTATATTCCCTTTGATGTCTTGAGTCGAGAGAGTAGTTGCGAG
AGAACAGAGGAGTATCACGCACCTCTCTCATGTTAGGTGGAAGCGATCCC
GTTCACGACCGGCGAGGGTGACGACGTGTTCGGCTTGAAAAAAAACTTTC
GGGAGTTTCTCGTTTAGAACTATAGCTATGATCACGTTCTAACTCAAAGC
CGATGACATGCTGATGCTCTTGCCGACACAAAATATCGTAAACCGTTGTA
CGCCCCCCTTCCCATCTCCACATGTCGCCAACGCACCTTGAACGTAGATC
GTCGACATCATTCACCCCGGGTTGGCCAACGTCTCCAAGAGTGAGCTCGG
CGAGATGATGGCCAAGGTCAGTGCAAGTCTTCGAAAAGCTTAGTCTCTCG
ACGCGCGAGACGTTTCGTGATACAGATACCACTCGTTATTTCATGTTTCA
TGTCTTGAACGTGCTCTGGGACTACTATAATACAGTGGACAGTTTCCGAT
GTTCTCGGCTGGTTGGACCTTTGCAAGGGTGTTTAAAGAAAAACCAGAAC
ACACCTAGACCTTCTGAGCATCCCCCGGTAATGGGGGGAAAATGTCAAAA
CGTTTACCAGGTAGGTGGGATCAAAAGGCTGCAAATACAAAACTCCTTCA
TGGCATTTAAAAAGGTTCCGCGATGCAGATAACATTGGGTCCACAGTATA
ATGTCGGGGAGAAACCCACCGTTATACTGTGTGTGTGTGTGTTTTCTTCC
CATCCATTCTGGACATCAAGTTCGTTGGACGTACCAGCCGGGGTCACACA
GGAGGAAGGTCACACAGGATTTTTAATCCACCTTCCTTCTGCGGTGCGTG
CCTTGATTTTTGTCGCGAGAAGGATTCAGCCATTCCTTTCCCTCGTCGAC
CGTGAAGTCGAATTTTGTGTACTAACGAATTAATCGTTCTCCACCCGTTG
GTACATTTACATTAATCGCCATGCAGGGACACCATAAAAACATTAAAAGC
AAACCAGAGACAATGTAGTACACCTGTCGCGATTTGGGTCCCTGTTGGTT
TAGAGTAGCGGGCTGTCACCATGATGTGATCCGTTGACGTTCGTACCTCT
TATTGACCACGAGCGGGATTGACATTTGATAGGTCTACGGCTGACTGGTT
GTGTCACCGTAGTTTCTTCAGTTGCAAGGACAATACTTGTGTTGTAGACT
ACTAGCCCCTATTTTTTAAAGAAAAATCTGAACGCACCTAGATCTTTTGA
GCATCCCCCCTATTGCGGTATGCTGCGATGGCGCTAGGTATGTATCTATA
TGTGTATGGTCAGACATATAGCAAGAGTACGGATCAACCGGGTAAGGTTG
CTAATCTTGCTCGTGGCCAGCTGAATAGGGAAAATTAATATTTCCCTGTC
CCCGTTCGCGCTATAGAGCTATGACAACGTGATCTATAGTCCATGACCCT
ACTTAAAAAAAAATCTACTGTACAAGATGCGATTTTCCAGTTTGTACGGT
CTTCACATATAAGCAGACTGGGCGTCAACCTGGATGGTTGCCAATCCCGC
CTCACAAGGGAAGTGAAAACTATTTATCCCGGTCCCCCTTTGCAACCATC
CGGAGATTTTGGTCTCGCGAGACCGGTTCGGGTCTCCGTCCTGTGTACTC
TACGAGTAGGCAGTATCAGCTTGTACTGCTGCAGGTCCCCTTTGCGCCTG
ACATTTTGGTCTTGCGAGACAGGTTCGGGTTTTCGTCGTCCTCTGTACCC
TACGAGTAGGCAGTATGGGCAGTATCAGCTTGAACTGCTTCAGCAAATCC
TGAAGACGTATAAAGTTGCATCCATCTTTACAGAACGGGCGAGCTGTTAC
GCCGTTTCAAACTTGGGATGGAATAAGTAAAAACTGGGGTCTAAAGCGTG
TGTCCTTACGTGATGTTGGGTGTTCCTAAATGGCGACTGGTGCAAGTGTA
CAGCAGTACATAAAACGGGTCTCCCCCAACATTGTACAAGTACTGTTGAC
AGCCCTGCTCGACTGGACAATCGTTGGGAAAACCAGACTAAATGTCGTGT
AGAGTTTTTAGTAGAAAATCTGAGCGCATCTTAAAACCTGTATCAGCCGA
TGTACCATTAGACCTCGAAAGGGTTGCATGCGTTCAAAAAAAAATTAGAA
GACAAAAGTTTTGAAATGCCCCGTCGAATGATTTCCCTGGCGGGTTTCCA
GCCTTCCGCGTATGATACCCCGAGACATTTCATCGGCAACCACGATTGAC
AAACCTGTTCCTTGTCGCGCAAAGATAAATATCGATTTGTCGAACCGTTT
ATCCTTGTTCTCCTGAAAAATGGCAGCGAGACGGGTATACAACAGTAGCT
ACTAATAGTAATAGAGTGTAAGTGATTTGCACAAGGAGTTCCGGTGACCA
CGATGACGACAAAGCTTAATCCTATCCGCAAACAATGAGGACGAATAAAA
AGCGTCATCCATTTCTCGAGTGGTCGAGCCGTTTCGTACTTGGAAGCTGA
AATGTCGCACCAACAGTAGTAACAACCTTGCAAATCGTGCCCCTCGCACC
TATGGTACTCATACAGTACATGGTTTTGTTTGGTACTATAGTCTAATAGT
AAACCGTCGAATCCAATCACGACAAACATGATGTCTTCGTTGCGTGTACA
CAAGAATAAATATTGTAATTTAGTGCTTGCTTGTAAAGTACAAATTGGTT
CTACGGTACAGTAGTAGTTGCAGCGTTGCGAGTACTGTGCCGTACAAATT
CATTGCTAGAGACCGCTAGCCTAAAGTACGTTGTCTCCCCACTATGTTAA
AACGGCGACCACAATGACGATAAACCTTAATCTGAATCGCAAATTATGAA
GACGAATAAAGCGTCATCCATTTCTCGAGTGGTCGAGCCGTTTCGTACTT
GGAAGCTGAAAAGTCGCACCAGCAGTAAAATAACTTTCCACATCGTGCCT
TCGCACTCTTCATTTTTAAAGAAAAATGTGAACGCACCTAGACTTTCTGA
GCATTCCCCTGTTTTTGTTTCATTAGAGATGTCGCTTTTTTCCCCGAGTA
TTTTTGTACCATTGCCATGTTGCAATTACTGTACAGTACCGTACAAATTT
TGCGCTAGAGACAGCCAGCCTTGGTACATCGTCTCCTCACTACTGCATGT
TAGAACGGCGACCACAATGACGATAAAGCTGAATCTGAATCGCAAATTAT
GAAGACGAATAAAGCGTCATCCATTTCTCGAGTGGTCGAGTCCTTTCGTA
CTTGGAAGCTGAAAAATCGCACCAGCAGTAAAATAACTCTTCAAATTGTT
CCTTCGCACTCGTTGTTTCCAAAGAAGAATGTGAACGCACCTAGACTTTC
TGAGCATCCCCCTGTTTTTGATTCATTGGAAATGTCGCTTTTTTTCCCGA
GTATTTTTGTACCATTGCCATGTTGCAATTACTGTACAGTACCGTACAAA
TTTTGCGCTAGAGACCACCAGCCTTTGGTACATCGTCTCCCCACTACTGT
ATGTTAGAACGGCGACCACAATGACGATAAAGCTGAATCTGAATCGCAAA
TTATGAAGACGAATAAAGCGTCATCCATTTCTCGAGTGGTCGAGTCCTTT
CGTACTTGGAAGCTGAAAAATCGCACCATCAGTAAAATAACTCTTCAAAT
CGTTCCTTCGCACTCGTTGTTTCCAAAGAATGTGAACGCACCTAGATATT
CTGAGCATCCCCCTGTTTTTGATTCATTGGAAATGTCGCTTTTTTTCCCG
AGTATTTGTGTACCATTGCCATGTTGCAATTACTGTACAGTACCGTACAA
ATTTTGCGCTAGAGACCACCAGCCTTTGGTACATCGTCTCCCCACTACTG
TATGTTAGAACGGCGACCACAATGACGATAAAGCTGAAACTGAATCGCAA
ATTATGAAGACGAATAAAGCGTGATCCATTTCTCGAGTGGTCGAGTCCTT
TCGTACTTGGAAGCTGAAAAATCGCACCAGCAGTAAAATAACTCTTCAAA
TTGTTCCTTCGCACTCGTTGTTTCCAAAGAAGAATGTGAACGCACCTAGA
CTTTCTGAGCATCCCCCTGTTTTTGATTCATTGGAAATGTCGCTATTTTC
CCGAGTATTTGTGTACCATTGCCATGTTGCAATTACTGTACAGTACCGTA
CAAATTTTGCGCTAGGGACAACCAGCCTTTGGTACATCGTCTACTCACTA
CTGCATGTTAGAACGGCGACCACAATGACGATAAAGCTGAATCTGAATCG
CAAATTATGAAGACGAATAAAGCGTCATCCATTTCTCGAGTGGCCGAGCC
ATTTCGTACTTGGAAGCTGAAAAATCGCACCATCAGTAAAATAACTCTTC
AAATCGTTCCTTCGCACTTGTTGTTTCCAAAGAAGAATGTGAACGCACCT
AGACTGTCTGAGCATCCCCCTGTTTTTGATTCATTGGAAATGTCGCTTTT
TTTCCCGAGTATTTTTGTACCATTGCCATGTTGCAATTACTGTACAGTAC
CGTACAAATTTTACGCTAGAGACCACCAGCCTTTGGTACATCGTCTCCCC
ACTACTGTATGTTAGAACGGCGACCACAATGACGATAAAGCTGAATCTGA
ATCGCAAATTATGAAGACGAATAAAGCGTCATCCATTTCTCGAGTGGTCG
AGTCCTTTCGTACTTGGAAGCTGAAAAATCGCACCATCAGTAAAATAACT
TTCCACATCGTGCTTCCGCGCACTCTGCGTCCTTTTTTGTTTTTTCTTGT
TTTTATCATATGTTGCAATTACAGTACCGTACAAATTTTGCGCTAGAGAC
CACCAGCCTTTGGTACATAGTCTCCCCACTATGTTGAAACGGCGACCACA
ATGACGACAAACCTGAATCTTACTCGCAAACTCTGAAGACGAATAAAGCG
TCATCCATTTCTCGAGTGGTCAAAAGCCAAGTTTGGTCGATTTGGTAGAT
CTAGATTCGACCTTATTCGCTCTACAACACTTTCTTTGGGTCGTGCAAAC
GGCGCGTGTCTGTTCCAAGATTTGCGAATGACTCGTGAGTGACATGCAAA
CCTGAGCCTCGCCAACACGCCGGAGTGTAAGTGGTGGCGTTCGGAGCTGT
CCCGGTCTGTATTTTGCCTGACGAATGGCCGGCCTTCCGTGCGCCGCGAC
ATTACTGTACACCGTCAACCACGATGACGACTACTGTACCTCTATCAAGT
GTTTTTATGGCAAAATCTCGAGGCATGTAAAAGTATTGTATTCATTTCTC
GAGTGATTTATACGGTTTTCATTTTGTTTCCTTTCTAATTTGTTCCGTCG
TGAGTCAAAACGCGAGTCCGGCGGTCGTGCAACAAAGCGCACGAATATGT
TTCTTCTCGCTTTCATTATGTAGTCTATTCGGTTTAACAACGCGGACAAG
AAGTGGATTCATGTCGCCCCTGTCCCTCTTAAGCCGAAGCCAATTTACCT
CCATTGAAACCTTCCGACGCGAAGTTCTCCCCGGACGGTGACGTTTGTAG
ATGCTCGGGAAGGTTGAAGCGTGTCAGTAAGTGGTCTGTCTAATAATTAA
TACAAGTAAAAACAAGTGATACAACAAAAATACGTGTTCATGGTTGATTT
GGGCGGACAAGGCTTTCGAGCGCGATTTCATCGCATTTACCGCTTTTATT
GGGTAGTCTTGGAAAGCGACGGCGTTGGAGGCTGAGGTGTGGGTTGAGAC
GGCCACGGAGGGTGGGCAAAGGTTCATGGCCGCGTGGAGGGAAGAAGAGG
AAGACGCGGCCAGACATCGCCAGGAGAAGAGAGAGGCAACGAGACTGGGA
AGGTTGTTATCGCACACGGAAGCGTTTATTTTTGCGAAGCGACACCCATT
GGCCTACCCGACGAGTCGAAGAAATCCTTGTACGGACGCGAGACAGAGAG
CCTAGGCATGTAGATGCGTCACATTATTTTTATTTTATTTTATCCGAACG
GACAGCGTGGGGGTGAGCTGCCAGACTTTCTCGTTTGCTCTTTTCCCTGT
TCGGCAGACCACGAGCTGGATTGGCCACCGTGTAAAGTAGTTTTCCGGGT
TGGCAACCAATACGCTGAATGTGAGAAACAACCCCCGGCAACCAAGAAGA
CGACAAACGTTGGGGTAATCTTAGTCGCAAAAACTGAAGATAAATGATAA
ATAAAGTGGCATCGATTGCTCAAATGGTCTGTCCGGTTGTTCAACCTGTT
TTTCTACCTATTATGCTCAGAAACGTCTTTGCAGCCTAATATCCTACATA
AGCGACGAATAAAGTTATCCATTTCTCGAGTAGTATGTCCGGTTGTTCAA
CCAGTTTTTTTTTATCTCTTACGCTTAGTAAGGTCACCACGCAAGTTCGT
GCAAACCACACGGGTCTTTCGTTCTTTGCCGCATTTCATCTTCTGAAGAT
TTTGGTAGCTCATTTACGGAAAAAAAAAGAAAGAAAAAAAACTGCGGGGA
CAATTAAAGCGTCAAGTATTTTTTGGTCGAACAGTCGAGTCAGTTCGGCC
TTTTTCTTATATTGTTGTTGTTGTTGTTTTCACATTAAAAACCGTTCTGA
CCTCTATCCAGTACCCTTCTCTTTCTTACTCTTCAAGGCAAATAAACGAA
TTTCCGTGGTCACAAGCTAACCCAAAATAAGGTACAGAAAAATAAAATAA
AAAGACCCAGAGAAAGTCCAACACTTGCGAGAAACATATGATACAGGTTC
CTAAAAATAACAGGTTCAGAAAAACAAGCAGGTTAGGGTATGAACCCCCC
CCCCCCCAAAAAGAAGTAGAGCCAATCGCTCCAAACTCGGAAGCTGAGTC
ACAAACAAAATATACTACCTATATAGAAATACCAATACAGGTAAAAAATA
AAATAAACGAAGAGGAAGCTATCCCCCCCCCCCTACGAAGCCGGGGAGTG
TTCATCGTCGGGTTCCCGCCGACCAGGCCATCCCCACTCAACACCTTGGA
GCTGTGAGAGGGCAAAAACAAAATTGATCACGCACGTCATGCAAGATAGT
ACCCTATGTCCTAGACAGTATCTCCACGCGCCCCTACTATGCCGGGGAGC
TCTTTGTCGGGTTTCTCACCAGCCAGGCAAATACGGGATAAAAACAAAAC
ACAATAGGTTTAACTCAAGGCAAGCGGTCAGGTCAAACCCGTTTATGGGC
AAAAAGCCCCAAGTGGAGGTAACTCAAGGGGCAGCGTATTATGGCTCATC
AGCACTCTTAAGCCGCTCGATTTACCTCGCGTAACTTGCTAGCCTCTTCT
TCGCTCTTGTGCCACGACGCCATAAAGCTCTCCGCCCCCAGCAGGACCCC
TGTGTACCACGGCACTCCCTCCCCCTTGCGCGCCGCCTCTGTCCAGACGA
GCCTGTCGACTCCGAAAGTCCGCCGATCAGTTGGCGCGGAGCCGTGTAGA
GCTCCGAATGCCTTGAAGTCGTCCCTCAAGCTTTTTTGCCAGTGCTGTGC
CGGCTGGCCGGGTCCCGGGTCTTCCCCCCCCTCGAGTCTCTCGGCGAACA
ACAGCCGCTTCGGGAGTCGCTTGTCATCCTGTCTGGCCAAGGCCCCTGCG
AACAGAAACCGTCGCTGGCGAATTGTCGCTTCCACACTTTGGCTCCCGGT
TTTCTTGAGGGCTTACGACATCTTTCGGTATGTGCCGTGAACGCGGTGGT
ACCCGATGACCCGCAGAAGGAGCTTGTGGTGCGTCGTCCGGAGCTGCCGA
TAGTGAGCGTTACGCGGGGCCCACGTCATGCACCCGTACAGAAAAGCCTC
CATGACCTCTGCCTTCAGCAACCGAGCCTTGAGCTTTAATGGCGCGTTTG
GCCTGTCAAGAGCTCTGTGGAGAACTTCCTAAAACATCCCCAAGCGATTT
TGGTGCGGCGGTTGATATCTGGTGTGATGTCGGCGTCTTCGGTAATGAGG
CCGCCCAGGTATACGAACTGGTGGACCTGGTGGTACTTCTGGCCGGCTGC
TGCAATATCCAGCGCCGGTAGAGGTGGTGTTGGTGTCTCCCCCGGTTGTT
GCGCCTTCTCCGGTGTCCGCATCAGGAGAGTCTCCGTCTTCTTCTCCGAT
ACGGTCAAGCCAAACGCACCGAATACCTCCACGATAAGCGTCATCATTCT
CCCTAGCCCTGCTGGCGATCTGGACACGATCCCAGCATCGTCGGAAGTAA
CGCGTTGCATTTGGTGCTATAATTTTGTCCATCAGCTTGGCTCTATTGGC
CAGCTTTCAGCACGCGATATTCCCGCGCTCACAAGGTAGTATGCCGGGGC
GACCACGATGACGACAAATCTGATATCTGAATCGCAAATCTGAAGACGAA
TAAAGCGTCATCCATTTCTCGAGTGGTCGATCCCGGTTTTTTGTTGATAG
TAGTCTACAGTATCCAATTCTGCCCGAGCATTACGACGCAAGTCTGATAG
CCATATATTCCGCTGCTGCTGTGAATGAAGAAATTGTTGTGTGGACTTGT
ATCAAACCTGAATCTCACGTCTACCGAGGACGACATTATTTTCCGCGATT
CTAGTCATGTCCCCTCAATCCTTCACTAAAAAAAAGAGTGTCATCCTTAT
AGTCTATACATTGTATCTAGGGCAATATCCATTATGTTTTTGTTTTGTTT
TTTTAATGCCCCTTTTTTGGCAAAGCATGGGCTTTTTTTGGTGATTGTGC
TGCTGCATATGCTACTTTTCGGTGGTTATGCTTTCGGTTATGCTCTATTT
TTCGAGGTCACATGTGCCCCAAAAAGGCGATTATGCTCCTGCATATGCTA
CTTTTCGGTGCTTATGCCATATATTATGCTCTGATTTTGGGGTCAAATAT
GCTCTCAAGAGGCGATTGTGCTACTGCTGTTCTGCTGTATGGTCGTTTCC
GGCTTATTTACTCTGGTTTTTGGTGGTGACATCGTATTTTTCATTTATTT
AACTTCTTCGCAATCAGAGTTGTGTTGTTAAACACATCCATGCATGCATG
ATGCATGCAAAGTATACGTCTGTGCGCATGCTTTTATACACCGAAAAATG
TTTCGAGACTACCAGGTATCGCATAAAAATTGGACTTTGTTTTGGATGAT
AGGATCAAAAATAAATATTATGTAAATATCACAATCCAGGAAACATAGAG
CAATATGTTTATTTATGGTTATTGGTGCATATTTTTGCGATAAATGAGTG
ATGATTGTACTTCGAAGTATTATTGTATTGTAAACTTCACGCTCCAACCT
TTAAGTGGATAATATAAGCATAATCACCTACTTCAAGCTGAGACGAGTGC
TCTCTTCACCCTTTCAGAACGCTTTATGCCTTGTTTAGCACACCTTATGC
ATGTTATCCGGCGTCTTACGCCTATTGTAGCACACATATGCTTGTAGTAG
TCCTGAATATGCCCGAGCATAGCTCTTTTCAAGATATGCTTTTTCCTATG
CTCTTTATCTCGAAATATGCCAAAAGTTATGCTAGCATAATAGATACTGG
TATAAGCCTATTTGTATCCGATTTATCGATTGTTACTCCACACTGGCGGC
CGCGATAACGACAAATCTGTTATAAGTATCTAAATCGACAAATCTGTTAT
AGGGGACTTTGTACTATGTTATCTACATGTACATTATTCAGTGCATGTTT
GTATTTCACTCTACGTGTTAGATTTGTGACAACAGTTATACAGGATGACT
ACCGGTAGTATAGGACAGTTAATTGTACTGTAGTGGAAATACATACCAGT
ACGATTTATATTAAGGATTGAATGTCAAACCATTCAGGTGGGATCATAGT
CTACAAATACGGAACCTCTTACATGACATTTAAACGGGTTCCCCAGCGGT
AGTAACATTGTATGGTGTCGGAGAGAAGCCCACCGTTAAACTACACTTAC
TTCAATCGCCATGCAGGGACACCAGACAAAAAAACAAATACAAAACCGAA
GCAATATAGTACAACATCACACATGGTAGTAATGATATAGACAACGACTC
TACATGGTATTTAAACGGATCCCCCAAAGGTAGTAAGTAACCTTGGGTCA
ACAGTGTAGTGTCGGGGAGAAACCCACCGTAATACTGTACACTTACATTG
ATAGCCACGCAGAGCCACCAACCATAACAAAACAGAAGACACTGTAGTGC
ATAGTTAAGAGGGTATTAAAGTAATAATATACGATAATAGTGCCATCGAA
CCATACACAAATAGAGGCTTGGGTCAACAGTAAGATGTCAGGGAGAGACC
CTCCGTTTTACTATACAATTACACTGATCGCCATGCAGGGACACCAAACA
ACCAACAACAAAAGACACGATAGGCCTGGATTGTTGATTATTGTTTTGTC
TCTAGAGCAAATACTTTCTTATCGAGTGTGAATAATGCACTGCCTGTTAT
TCTTATCGTCGTTTTTTCATTACAAGTAGGCGGGAGCTTGGAACGTGGTA
AATAGACAAACTCCGGCCGCTGCAGTCGTGGCGCGATGACGTAGAAGCGT
GTAATCTTTTCCAAAAATAATTTTGGCCGCTTGGAGGAAGAGAGGCGGGT
CTCTTGTAGCGCTTTTGGCGCAAAAGGATAGCTTTCGCAGCACCAGCACC
CATCGTTTATTATTTGTCACCAGTGGGTACTCTTGAGTCAAGTATTTCCT
TCTCCCTCCTCTTCCTCCCCCGTATATATATAAAATAATAAGGAAATTTC
AGCCGTGTCTCTCTCTGTCTGAAACTCTTCTCGGGTGTCGGTTCCGTCTG
CCCTGCGCTTCCGCTTGATCTTTGGCTAGCAGAAGTTCCGCGTGTCGAAC
GCGCAGACGGTGTCGATGTTTGGCATCCGGACGCACTACGGTGGAGGCAA
GAGCACGGGATTCTGCCTCATCTACGACAGCTTAGAGGACATGAAGAAAT
TCGAACCCAGGCACCGTCTCGTGCGCGCGGGCCTTAAGGTACGCTTTGAT
AACACACCTCGAAGTACAGTAGACGAATATTACTTGATTTCGACGTTTTT
TGTTTCACTGCAGTCTAGAGCTGAAAAGTAGCCGCGTAAGCCATGCGTGT
CAAACTCGACCCTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTGTTTTGG
AATCCGTTCACTTGCACTCGCAGGAGAAGAAAGAGACCTCCCGCAAGCAG
ATCAAGGAGGCTAAAAACAGGGGCAAAAAGATTCGCGGCACGGGTCGCCG
GATCGCCAAGCACAAGGCGAAGAAGGCCGCCAAGTAG back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig105:362763..374849- >mRNA_A-nodosum_M_contig105.26.1 ID=mRNA_A-nodosum_M_contig105.26.1|Name=mRNA_A-nodosum_M_contig105.26.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=408bp|location=Sequence derived from alignment at A-nodosum_M_contig105:362763..374849- (Ascophyllum nodosum dioecious) ATGTCTTCTAACGTGACCGTGCGCACGCGGAAATTCATTCGGAATGCCCT GCTTGCAAGGAGACAGATGATCGTCGACATCATTCACCCCGGGTTGGCCA ACGTCTCCAAGAGTGAGCTCGGCGAGATGATGGCCAAGAAGTTCCGCGTG TCGAACGCGCAGACGGTGTCGATGTTTGGCATCCGGACGCACTACGGTGG AGGCAAGAGCACGGGATTCTGCCTCATCTACGACAGCTTAGAGGACATGA AGAAATTCGAACCCAGGCACCGTCTCGTGCGCGCGGGCCTTAAGGAGAAG AAAGAGACCTCCCGCAAGCAGATCAAGGAGGCTAAAAACAGGGGCAAAAA GATTCGCGGCACGGGTCGCCGGATCGCCAAGCACAAGGCGAAGAAGGCCG CCAAGTAG back to top
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