prot_A-nodosum_M_contig1049.8.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1049.8.1
Unique Nameprot_A-nodosum_M_contig1049.8.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length201
Homology
BLAST of mRNA_A-nodosum_M_contig1049.8.1 vs. uniprot
Match: D8LB17_ECTSI (PINc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB17_ECTSI)

HSP 1 Score: 384 bits (987), Expect = 7.940e-135
Identity = 190/200 (95.00%), Postives = 196/200 (98.00%), Query Frame = 0
Query:    1 MGKAKKSRAVRVKFAKTKRLLSPKDCRLKGNMEKEEAKRKKTKEAETNHVKQVPTSMFFAHNTALGPPYHVLVDTNFINFSIKNKLDIVKAMMDCLLAKAIPCITECVVAELEKLGPKYRVALRLSKDPRFQRLPCSHRGTYADDCLVQRAEQHRCYIVATCDKDLKRRIRKIPGVPIMYISNRKFSIERMAEAFGAPPT 200
            MGKAKKSRAVRVKFA+ KRLLSPKDCRLKGN EKEEAKRKK KEAETNHVKQVPT+MFFAHNTALGPPYHVL+DTNFINFSIKNKLDIVKAMMDCLLAKAIPC+T+CVVAELEKLGPKYRVALRLSKDPRFQRLPCSH GTYADDCLVQRAEQHRCYIVATCDK+LKRRIRKIPGVPIMYISNRKFSIERMAEAFGAPPT
Sbjct:    1 MGKAKKSRAVRVKFAQAKRLLSPKDCRLKGNQEKEEAKRKKAKEAETNHVKQVPTAMFFAHNTALGPPYHVLIDTNFINFSIKNKLDIVKAMMDCLLAKAIPCVTDCVVAELEKLGPKYRVALRLSKDPRFQRLPCSHTGTYADDCLVQRAEQHRCYIVATCDKELKRRIRKIPGVPIMYISNRKFSIERMAEAFGAPPT 200          
BLAST of mRNA_A-nodosum_M_contig1049.8.1 vs. uniprot
Match: A0A836CF02_9STRA (Fcf1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF02_9STRA)

HSP 1 Score: 322 bits (826), Expect = 2.740e-110
Identity = 157/200 (78.50%), Postives = 180/200 (90.00%), Query Frame = 0
Query:    1 MGKAKKSRAVRVKFAKTKRLLSPKDCRLKGNMEKEEAKRKKTKEAETNHVKQVPTSMFFAHNTALGPPYHVLVDTNFINFSIKNKLDIVKAMMDCLLAKAIPCITECVVAELEKLGPKYRVALRLSKDPRFQRLPCSHRGTYADDCLVQRAEQHRCYIVATCDKDLKRRIRKIPGVPIMYISNRKFSIERMAEAFGAPPT 200
            MG+AKK RAV+VKFA++KRL+SPKD RLK   +K E K  K KE ET  V Q P++MFF +NTALGPPYHV+VDTNFINFSIKNKLD+VK+MMDCLLAKA PCIT+CV+AELEKLGPKYR+ALRL+KD RFQRLPCSH+GTYADDC++QRAEQHRCYIVATCDK+LKRRIRKI GVPIMYISNRK++IERM EAFGAPP+
Sbjct:    1 MGRAKKQRAVKVKFAQSKRLISPKDPRLKEVAKKAEEKAAKAKEKETRQVTQTPSAMFFKYNTALGPPYHVIVDTNFINFSIKNKLDMVKSMMDCLLAKATPCITDCVIAELEKLGPKYRIALRLAKDERFQRLPCSHKGTYADDCILQRAEQHRCYIVATCDKELKRRIRKIAGVPIMYISNRKYTIERMPEAFGAPPS 200          
BLAST of mRNA_A-nodosum_M_contig1049.8.1 vs. uniprot
Match: A0A397JSP6_9GLOM (PINc domain-containing protein n=2 Tax=Glomeromycetes TaxID=214506 RepID=A0A397JSP6_9GLOM)

HSP 1 Score: 295 bits (755), Expect = 3.310e-99
Identity = 140/198 (70.71%), Postives = 176/198 (88.89%), Query Frame = 0
Query:    1 MGKAKKSRAVRVKFAKTKRLLSPKDCRLKGNMEKEEAKRKKTKEAETNHVKQVPTSMFFAHNTALGPPYHVLVDTNFINFSIKNKLDIVKAMMDCLLAKAIPCITECVVAELEKLGPKYRVALRLSKDPRFQRLPCSHRGTYADDCLVQRAEQHRCYIVATCDKDLKRRIRKIPGVPIMYISNRKFSIERMAEAFGAP 198
            MGKAK++R    KFA+ KRLL+PKD RLK   EK++ K ++ +++E  +V QV +S+FF +NTALGPPYHVLVDTNFINFSI+NKL++V+AMMDCL AK+IPCIT+CV+AELEKLGPKYR+ALR+++DPRF+RLPC+H+GTYADDCLVQR  QH+CYIVATCD+DLKRRIRKIPG+PIMYIS RK++IER+ EA+GAP
Sbjct:   24 MGKAKRTR----KFAEAKRLLNPKDSRLKSVQEKQKTKEEQKRKSEVRNVPQVASSLFFRYNTALGPPYHVLVDTNFINFSIQNKLELVQAMMDCLYAKSIPCITDCVMAELEKLGPKYRIALRIARDPRFERLPCTHKGTYADDCLVQRVMQHKCYIVATCDRDLKRRIRKIPGIPIMYISKRKYTIERLPEAYGAP 217          
BLAST of mRNA_A-nodosum_M_contig1049.8.1 vs. uniprot
Match: A0A812Y1D1_SYMMI (FCF1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Y1D1_SYMMI)

HSP 1 Score: 288 bits (736), Expect = 1.300e-96
Identity = 142/203 (69.95%), Postives = 169/203 (83.25%), Query Frame = 0
Query:    1 MGKAKKSRAVRVKFAKTKRLLSPKDCRLKGNMEKEEAKRKKTKEAE---TNHVKQVPTSMFFAHNTALGPPYHVLVDTNFINFSIKNKLDIVKAMMDCLLAKAIPCITECVVAELEKLGPKYRVALRLSKDPRFQRLPCSHRGTYADDCLVQRAEQHRCYIVATCDKDLKRRIRKIPGVPIMYISNRKFSIERMAEAFGAPPT 200
            M K KK+R + VK     +++S KD R+K N EK+ A  +K  +A+   + HV Q PT++FF HNT LGPPYHVLVDTNFINF+IKNKL+I K+MMDCLLAK IPCIT+CV+AELEKLG KYR+ALRL+KDPRF+RLPCSH GTYADDCL+ R +QHRCYIVATCDKDLKRRIRK+PGVPIMYI++RKFS+ERM EAFGAP T
Sbjct:    1 MTKQKKTRKIAVK-----KIISGKDPRIKANQEKQAADAQKALKAQKEASRHVTQAPTALFFTHNTQLGPPYHVLVDTNFINFAIKNKLEIYKSMMDCLLAKCIPCITDCVMAELEKLGTKYRLALRLAKDPRFERLPCSHPGTYADDCLLHRCQQHRCYIVATCDKDLKRRIRKVPGVPIMYINSRKFSVERMPEAFGAPKT 198          
BLAST of mRNA_A-nodosum_M_contig1049.8.1 vs. uniprot
Match: A0A1Y1ZF27_9FUNG (Fcf1-domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1ZF27_9FUNG)

HSP 1 Score: 286 bits (731), Expect = 7.020e-96
Identity = 136/198 (68.69%), Postives = 170/198 (85.86%), Query Frame = 0
Query:    1 MGKAKKSRAVRVKFAKTKRLLSPKDCRLKGNMEKEEAKRKKTKEAETNHVKQVPTSMFFAHNTALGPPYHVLVDTNFINFSIKNKLDIVKAMMDCLLAKAIPCITECVVAELEKLGPKYRVALRLSKDPRFQRLPCSHRGTYADDCLVQRAEQHRCYIVATCDKDLKRRIRKIPGVPIMYISNRKFSIERMAEAFGAP 198
            MGKAKK+R    +F   KR+L+PKD RLK N EK + K ++ +++   H+ QV +S+FF +NTALGPPYHVLVDTNFINFSI+NKL++VK+MMDCL AK IPCIT+CV+AELEKLGPKYRVALR+++DPRF+RLPC+H+GTYADDCLV R  QH+CYIVATCD+DLKRRIRKIPG+PIMYI+  K++IER+ EA+GAP
Sbjct:    1 MGKAKKTR----QFGLVKRMLNPKDARLKENQEKLKKKEEEKEKSLVTHIPQVASSLFFRYNTALGPPYHVLVDTNFINFSIQNKLELVKSMMDCLYAKCIPCITDCVMAELEKLGPKYRVALRVARDPRFERLPCAHKGTYADDCLVNRVMQHKCYIVATCDRDLKRRIRKIPGIPIMYIAQHKYTIERLPEAYGAP 194          
BLAST of mRNA_A-nodosum_M_contig1049.8.1 vs. uniprot
Match: A0A397WAQ8_9GLOM (Fcf1-domain-containing protein n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397WAQ8_9GLOM)

HSP 1 Score: 284 bits (727), Expect = 2.750e-95
Identity = 136/196 (69.39%), Postives = 169/196 (86.22%), Query Frame = 0
Query:    1 MGKAKKSRAVRVKFAKTKRLLSPKDCRLKGNMEKEEAKRKKTKEAETNHVKQVPTSMFFAHNTALGPPYHVLVDTNFINFSIKNKLDIVKAMMDCLLAKAIPCITECVVAELEKLGPKYRVALRLSKDPRFQRLPCSHRGTYADDCLVQRAEQHRCYIVATCDKDLKRRIRKIPGVPIMYISNRKFSIERMAEAFG 196
            MGKAKK+R    +FA+ KRLL+PKD RLK   EK++ K ++ ++    +V QV +S+FF HN ALGPPYH+LVDTNFINFSI+NKL++V+AMMDCL AK IPCIT+CV+AELEKLGPKYR+ALR+++DPRF+RLPCSH+GTYADDCLV+R  QH+CYIVATCDKDLKRRIRKIPG+PIMYIS RK++IER+ E +G
Sbjct:    1 MGKAKKTR----RFAEVKRLLNPKDSRLKSVQEKQKKKNEEKEKETIRNVPQVASSLFFRHNAALGPPYHILVDTNFINFSIQNKLELVQAMMDCLYAKCIPCITDCVMAELEKLGPKYRIALRVARDPRFERLPCSHKGTYADDCLVKRVMQHKCYIVATCDKDLKRRIRKIPGIPIMYISKRKYTIERLPENYG 192          
BLAST of mRNA_A-nodosum_M_contig1049.8.1 vs. uniprot
Match: UPI0009E60673 (rRNA-processing protein FCF1 homolog n=2 Tax=Scleractinia TaxID=6125 RepID=UPI0009E60673)

HSP 1 Score: 282 bits (722), Expect = 1.650e-94
Identity = 136/198 (68.69%), Postives = 164/198 (82.83%), Query Frame = 0
Query:    1 MGKAKKSRAVRVKFAKTKRLLSPKDCRLKGNMEKEEAKRKKTKEAETNHVKQVPTSMFFAHNTALGPPYHVLVDTNFINFSIKNKLDIVKAMMDCLLAKAIPCITECVVAELEKLGPKYRVALRLSKDPRFQRLPCSHRGTYADDCLVQRAEQHRCYIVATCDKDLKRRIRKIPGVPIMYISNRKFSIERMAEAFGAP 198
            MGKAKK+R    KFA  KR++SPKD R+K N E         ++ ET HV+Q  +++FF +NT LGPPY++LVDTNFINFSIKNKLDIVK+MMDCL AK +PCIT+CV+AELEKLG KYRVALR++KDPRF RLPC HRGTYADDC+V R +QH+CYIVATCD+DLKRRIRK+PGVPIMYIS  K++IERM +A+GAP
Sbjct:    1 MGKAKKTR----KFAAVKRMISPKDMRIKQNQEXXXXXXXXXEDNETRHVEQSSSALFFQYNTQLGPPYYILVDTNFINFSIKNKLDIVKSMMDCLYAKCVPCITDCVMAELEKLGSKYRVALRMAKDPRFDRLPCMHRGTYADDCIVNRIQQHKCYIVATCDRDLKRRIRKVPGVPIMYISQHKYTIERMPDAYGAP 194          
BLAST of mRNA_A-nodosum_M_contig1049.8.1 vs. uniprot
Match: U9SSR2_RHIID (Fcf1-domain-containing protein n=8 Tax=Eukaryota TaxID=2759 RepID=U9SSR2_RHIID)

HSP 1 Score: 281 bits (720), Expect = 3.200e-94
Identity = 138/199 (69.35%), Postives = 173/199 (86.93%), Query Frame = 0
Query:    1 MGKAKKSRAVRVKFAKTKRLLSPKDCRLKGNMEKEEAKRK-KTKEAETNHVKQVPTSMFFAHNTALGPPYHVLVDTNFINFSIKNKLDIVKAMMDCLLAKAIPCITECVVAELEKLGPKYRVALRLSKDPRFQRLPCSHRGTYADDCLVQRAEQHRCYIVATCDKDLKRRIRKIPGVPIMYISNRKFSIERMAEAFGAP 198
            MGKAKK+R    KFA+ KRL++P D RLK   EK++ +++ KTKE+  N V QV +S+FF +NTALGPPY V+VDTNFINFSI+NKL++V++MMDCL AK IPCIT+CV+AELEKLGPKYR+ALR+++DPRF+RLPC H+GTYADDCLVQR  QH+CYIVATCD+DLKRRIRKIPG+PIMYIS R+++IER+ EA+GAP
Sbjct:    1 MGKAKKTR----KFAEVKRLINPADSRLKSIQEKQKKRQEEKTKESVRN-VPQVASSLFFRYNTALGPPYRVMVDTNFINFSIQNKLELVRSMMDCLYAKCIPCITDCVMAELEKLGPKYRIALRVARDPRFERLPCMHKGTYADDCLVQRVSQHKCYIVATCDRDLKRRIRKIPGIPIMYISKRRYTIERLPEAYGAP 194          
BLAST of mRNA_A-nodosum_M_contig1049.8.1 vs. uniprot
Match: A0A139AXY0_GONPJ (Fcf1-domain-containing protein n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AXY0_GONPJ)

HSP 1 Score: 280 bits (717), Expect = 8.560e-94
Identity = 132/194 (68.04%), Postives = 166/194 (85.57%), Query Frame = 0
Query:    1 MGKAKKSRAVRVKFAKTKRLLSPKDCRLKGNMEKEEAKRKKTKEAETNHVKQVPTSMFFAHNTALGPPYHVLVDTNFINFSIKNKLDIVKAMMDCLLAKAIPCITECVVAELEKLGPKYRVALRLSKDPRFQRLPCSHRGTYADDCLVQRAEQHRCYIVATCDKDLKRRIRKIPGVPIMYISNRKFSIERMAEA 194
            MGKAKK+R    KFA+ KR++SPKD RLK N +K++A+  K  +A   HV+QV +SMFF +NT+L PPY+VL+DTNFINFSI NKLDI+KAMMDCL AK +PC+TECV+ ELEKLGPKYR+AL  ++DPRF++LPCSH+GTYADDCLV+R  QH+CYIVATCD+DLKRRIRK+PG+PIMYISN K++IER+ +A
Sbjct:    1 MGKAKKTR----KFAEVKRMISPKDARLKHNQDKKKAEEAKKTQAVVRHVQQVASSMFFKYNTSLTPPYNVLIDTNFINFSISNKLDIIKAMMDCLFAKCVPCVTECVLGELEKLGPKYRLALMTARDPRFEKLPCSHKGTYADDCLVERVMQHKCYIVATCDRDLKRRIRKVPGIPIMYISNHKYAIERLPDA 190          
BLAST of mRNA_A-nodosum_M_contig1049.8.1 vs. uniprot
Match: W2G0I5_PHYPR (PINc domain-containing protein n=7 Tax=Phytophthora parasitica TaxID=4792 RepID=W2G0I5_PHYPR)

HSP 1 Score: 281 bits (719), Expect = 9.010e-94
Identity = 141/199 (70.85%), Postives = 170/199 (85.43%), Query Frame = 0
Query:    1 MGKAKKSRAVRVKFAKTKRLLSPKDCRLKGNMEKEEAK--RKKTKEAETNHVKQVPTSMFFAHNTALGPPYHVLVDTNFINFSIKNKLDIVKAMMDCLLAKAIPCITECVVAELEKLGPKYRVALRLSKDPRFQRLPCSHRGTYADDCLVQRAEQHRCYIVATCDKDLKRRIRKIPGVPIMYISNRKFSIERMAEAFGA 197
            MGKAKK+R    KFA  KR++SP+D R+  ++ K  AK   KK KEAE   + Q+P++MFF +N+ALGPPY+VLVDTNFINFSIKNKL++V AMMDCLLAK+ PCIT+CV+AELEKLG KYRVALRL+KDPRF+RLPC+H+GTYADDCLVQR +QHRCYIVATCD++LKRRIRK+PGVPIMYISNRK+ IER+ EA  A
Sbjct:   19 MGKAKKTR----KFAAVKRMISPRDTRI-NSVRKAVAKVEEKKRKEAEPKQIDQIPSNMFFKYNSALGPPYNVLVDTNFINFSIKNKLEVVSAMMDCLLAKSTPCITDCVMAELEKLGHKYRVALRLAKDPRFERLPCTHKGTYADDCLVQRVQQHRCYIVATCDRELKRRIRKVPGVPIMYISNRKYVIERLPEANAA 212          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1049.8.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LB17_ECTSI7.940e-13595.00PINc domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A836CF02_9STRA2.740e-11078.50Fcf1-domain-containing protein n=1 Tax=Tribonema m... [more]
A0A397JSP6_9GLOM3.310e-9970.71PINc domain-containing protein n=2 Tax=Glomeromyce... [more]
A0A812Y1D1_SYMMI1.300e-9669.95FCF1 protein n=1 Tax=Symbiodinium microadriaticum ... [more]
A0A1Y1ZF27_9FUNG7.020e-9668.69Fcf1-domain-containing protein n=1 Tax=Basidiobolu... [more]
A0A397WAQ8_9GLOM2.750e-9569.39Fcf1-domain-containing protein n=2 Tax=Gigaspora T... [more]
UPI0009E606731.650e-9468.69rRNA-processing protein FCF1 homolog n=2 Tax=Scler... [more]
U9SSR2_RHIID3.200e-9469.35Fcf1-domain-containing protein n=8 Tax=Eukaryota T... [more]
A0A139AXY0_GONPJ8.560e-9468.04Fcf1-domain-containing protein n=1 Tax=Gonapodya p... [more]
W2G0I5_PHYPR9.010e-9470.85PINc domain-containing protein n=7 Tax=Phytophthor... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002716PIN domainSMARTSM00670PIN_9coord: 69..168
e-value: 6.7E-11
score: 52.2
NoneNo IPR availableGENE3D3.40.50.1010coord: 38..195
e-value: 6.9E-46
score: 157.8
NoneNo IPR availablePANTHERPTHR12416:SF2RRNA-PROCESSING PROTEIN FCF1 HOMOLOGcoord: 1..195
NoneNo IPR availablePANTHERPTHR12416UNCHARACTERIZEDcoord: 1..195
IPR006984rRNA-processing protein Fcf1/Utp23PFAMPF04900Fcf1coord: 94..190
e-value: 4.9E-35
score: 119.8
IPR037503rRNA-processing protein Fcf1, PIN domainCDDcd09864PIN_Fcf1-likecoord: 59..189
e-value: 5.08913E-100
score: 283.272
IPR029060PIN-like domain superfamilySUPERFAMILY88723PIN domain-likecoord: 67..190

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1049contigA-nodosum_M_contig1049:101508..108001 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1049.8.1mRNA_A-nodosum_M_contig1049.8.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1049 101508..108151 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1049.8.1 ID=prot_A-nodosum_M_contig1049.8.1|Name=mRNA_A-nodosum_M_contig1049.8.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=201bp
MGKAKKSRAVRVKFAKTKRLLSPKDCRLKGNMEKEEAKRKKTKEAETNHV
KQVPTSMFFAHNTALGPPYHVLVDTNFINFSIKNKLDIVKAMMDCLLAKA
IPCITECVVAELEKLGPKYRVALRLSKDPRFQRLPCSHRGTYADDCLVQR
AEQHRCYIVATCDKDLKRRIRKIPGVPIMYISNRKFSIERMAEAFGAPPT
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002716PIN_dom
IPR006984Fcf1/Utp23
IPR037503Fcf1_PIN
IPR029060PIN-like_dom_sf