prot_A-nodosum_M_contig1049.11.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1049.11.1
Unique Nameprot_A-nodosum_M_contig1049.11.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length864
Homology
BLAST of mRNA_A-nodosum_M_contig1049.11.1 vs. uniprot
Match: D8LB19_ECTSI (Similar to RING finger protein 122 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB19_ECTSI)

HSP 1 Score: 217 bits (552), Expect = 3.440e-55
Identity = 118/196 (60.20%), Postives = 145/196 (73.98%), Query Frame = 0
Query:  666 VHGDEAAAQRLAKREQEAQAREDELLALRLAAREEASAERHASRSHLRRRSHWSLS---------PPLGLHPATAAAVATGGEVSDAVLALQFQDIDANDFEALLTLDEQGGVGGRTCGGGRGLSEQVVEDLLRSGKVAAGGLEESCAICLVGYEVGEEIATLPCRHTFHDECIRKWLLIRNRCPTDMRPVVPDSP 852
            +  DEAAA+R AK+EQEAQAREDELLALRLAAREEA AER ASR  ++RRS+ S +          P   HPA A+A   GG +SDAV ALQFQDID NDFE LL LDE GG GGR C GG+GL+++ +E +L++GK A   LEESCA+C+  + +G+EI+ LPC H FH  CIRKWLL+RNRCPT ++ V+PDSP
Sbjct:  772 IDEDEAAARRFAKQEQEAQAREDELLALRLAAREEAGAERRASRRRVQRRSNASSARRNSIPGYISPDSNHPAVASAA--GGNLSDAVRALQFQDIDENDFETLLALDEAGGEGGRCCAGGKGLADEAMEAVLQTGKAAGARLEESCAVCMEEFGLGDEISVLPCLHAFHGACIRKWLLMRNRCPTCLKAVIPDSP 965          
BLAST of mRNA_A-nodosum_M_contig1049.11.1 vs. uniprot
Match: A0A6H5L8B3_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8B3_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 7.010e-35
Identity = 70/113 (61.95%), Postives = 87/113 (76.99%), Query Frame = 0
Query:  740 VSDAVLALQFQDIDANDFEALLTLDEQGGVGGRTCGGGRGLSEQVVEDLLRSGKVAAGGLEESCAICLVGYEVGEEIATLPCRHTFHDECIRKWLLIRNRCPTDMRPVVPDSP 852
            VSDA+ ALQFQDID NDFE LL LDE GG GGR C GG+GL+E+ +E  L++G  A   LEESCA+C+  + +G+EI+ LPC H FH  CIRKWLL+RNRCPT ++ V+PDSP
Sbjct:  856 VSDAIRALQFQDIDENDFETLLALDEAGGEGGRCCAGGKGLAEEAMEAALQAGTAAGARLEESCAVCMEEFGLGDEISVLPCLHAFHGACIRKWLLMRNRCPTCLKAVIPDSP 968          
BLAST of mRNA_A-nodosum_M_contig1049.11.1 vs. uniprot
Match: A0A2I0VU68_9ASPA (E3 ubiquitin ligase BIG BROTHER-related n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0VU68_9ASPA)

HSP 1 Score: 68.6 bits (166), Expect = 2.220e-10
Identity = 38/97 (39.18%), Postives = 51/97 (52.58%), Query Frame = 0
Query:  751 DIDANDFEALLTLDEQGGVGGRTCGGGRGLSEQVVEDLLRSGKVAAGGLE------ESCAICLVGYEVGEEIATLPCRHTFHDECIRKWLLIRNRCP 841
            D+D   +E LL L+E+ G          GL+E+ +   LR  K +   LE      E C IC   Y  GE I TL CRH FH +CI++WL+ +N CP
Sbjct:    4 DVDNMSYEELLALEERIGYVNT------GLNEETILKSLRQRKYSPCNLEVASAEKEPCCICREDYSEGEGIGTLDCRHDFHTDCIKQWLMFKNLCP 94          
BLAST of mRNA_A-nodosum_M_contig1049.11.1 vs. uniprot
Match: A0A7S2TJH4_9EUKA (Hypothetical protein n=3 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TJH4_9EUKA)

HSP 1 Score: 70.5 bits (171), Expect = 9.170e-10
Identity = 48/145 (33.10%), Postives = 71/145 (48.97%), Query Frame = 0
Query:  705 RHASRSHLRRRSHWSLSPPLGLHPATAAAVATGGEVSDAVLALQFQDIDANDFEALLTLDEQGGVGGRTCGGGRGLSEQVVEDLLRSGKVAAGGLEES--CAICLVGYEVGEEIATLPCRHTFHDECIRKWLLIRNRCPTDMRPV 847
            R A R+  + R++  +   +    A A     G  ++   L +  +D DAND+E LL LDE             GL++Q +E   RS   A    + +  C+ICL     G+EI T+PC H+FH +CI KWL  +  CP  + PV
Sbjct:   76 RLADRARTQNRAYEQVPQQVYGQNAAAQEYVLGINLNHLRLIMTDRDFDANDYEDLLRLDEG-------LDASHGLAQQQIERYPRSVFKATDSKKAAPTCSICLEALVDGDEIRTVPCMHSFHVDCIDKWLRNKPNCPVCLFPV 213          
BLAST of mRNA_A-nodosum_M_contig1049.11.1 vs. uniprot
Match: A0A7S4NW69_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4NW69_9EUKA)

HSP 1 Score: 65.9 bits (159), Expect = 3.690e-9
Identity = 30/65 (46.15%), Postives = 42/65 (64.62%), Query Frame = 0
Query:  800 EESCAICLVGYEVGEEIATLPCRHTFHDECIRKWLLIRNR-CPTDMRPVV-PDSPDAGHGAGRKR 862
            EE+C +CLV YE  +E+ TLPCRH FH +CIR+WLL  +  CP D + V+ P + + G   G  +
Sbjct:   13 EETCRVCLVEYEDNDEVMTLPCRHHFHSDCIREWLLNSSTACPLDGQEVILPLADNDGDNDGNNK 77          
BLAST of mRNA_A-nodosum_M_contig1049.11.1 vs. uniprot
Match: V4ME19_EUTSA (RING-type domain-containing protein n=11 Tax=Brassicaceae TaxID=3700 RepID=V4ME19_EUTSA)

HSP 1 Score: 67.4 bits (163), Expect = 4.100e-9
Identity = 41/101 (40.59%), Postives = 54/101 (53.47%), Query Frame = 0
Query:  770 GGRTCGGGRGLSEQVVEDLLRSGKVAA----------GGLEESCAICLVGYEVGEEIATLP-CRHTFHDECIRKWLLIRNRCPTDMRPVVPDSPD-AGHGA 858
            GG +    +GL ++V++ L RS   AA          GG    CAICL  +  GEEI  LP C H+FH ECI KWL+ R+ CP+  R + P   D  GH +
Sbjct:   61 GGDSPSPNKGLKKKVLQSLPRSTFTAAESTSGAAADDGGDSSECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLVSRSSCPSCRRILTPVRCDRCGHSS 161          
BLAST of mRNA_A-nodosum_M_contig1049.11.1 vs. uniprot
Match: A0A1Y1WMH7_9FUNG (RING-type domain-containing protein (Fragment) n=1 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1WMH7_9FUNG)

HSP 1 Score: 64.7 bits (156), Expect = 4.740e-9
Identity = 28/62 (45.16%), Postives = 39/62 (62.90%), Query Frame = 0
Query:  781 SEQVVEDL-LRSGKVAAGGLEESCAICLVGYEVGEEIATLPCRHTFHDECIRKWLLIRNRCP 841
            SE  +++L LR+      G +E C+IC   Y+ GEE+  LPC+H FHDECI+ WL +   CP
Sbjct:   34 SEDAIKELRLRAVTGEEAGRKEDCSICQDEYKQGEEVVELPCKHLFHDECIKHWLNVNGTCP 95          
BLAST of mRNA_A-nodosum_M_contig1049.11.1 vs. uniprot
Match: UPI0009E5CCD1 (probable E3 ubiquitin-protein ligase HIP1 isoform X1 n=2 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E5CCD1)

HSP 1 Score: 70.9 bits (172), Expect = 7.190e-9
Identity = 39/97 (40.21%), Postives = 52/97 (53.61%), Query Frame = 0
Query:  751 DIDANDFEALLTLDEQGGVGGRTCGGGRGLSEQVVEDLLRSGKV------AAGGLEESCAICLVGYEVGEEIATLPCRHTFHDECIRKWLLIRNRCP 841
            D+D   +E LL L+E+ G          GL EQ +   L+  K       AA   +E C IC   Y+ GE I TL CRH FH +CI++WL+I+N CP
Sbjct:  509 DVDDMSYEELLALEERIGYVNT------GLCEQTILKFLKKRKYSPCELEAAASEQEPCCICREDYKEGEAIGTLNCRHDFHTDCIKQWLIIKNLCP 599          
BLAST of mRNA_A-nodosum_M_contig1049.11.1 vs. uniprot
Match: A0A6P5XBQ7_DURZI (E3 ubiquitin ligase BIG BROTHER-related-like n=1 Tax=Durio zibethinus TaxID=66656 RepID=A0A6P5XBQ7_DURZI)

HSP 1 Score: 63.9 bits (154), Expect = 1.650e-8
Identity = 36/94 (38.30%), Postives = 47/94 (50.00%), Query Frame = 0
Query:  751 DIDANDFEALLTLDEQGGVGGRTCGGGRGLSEQVVEDL---LRSGKVAAGGLEESCAICLVGYEVGEEIATLPCRHTFHDECIRKWLLIRNRCP 841
            D D   +E LL L E  G+  R      GLS   +  L       + +  G  +SC ICLVGYE G+ +  L C+H++H ECI  WL I   CP
Sbjct:   26 DPDELSYEELLALGEVVGIESR------GLSADSIASLPSLTYKAESSQTGNNDSCVICLVGYEDGDSLTVLSCKHSYHPECINDWLKINKVCP 113          
BLAST of mRNA_A-nodosum_M_contig1049.11.1 vs. uniprot
Match: D7L9E3_ARALL (Ring-H2 finger A3A n=3 Tax=Camelineae TaxID=980083 RepID=D7L9E3_ARALL)

HSP 1 Score: 64.7 bits (156), Expect = 3.470e-8
Identity = 39/100 (39.00%), Postives = 52/100 (52.00%), Query Frame = 0
Query:  770 GGRTCGGGRGLSEQVVEDLLRS---------GKVAAGGLEESCAICLVGYEVGEEIATLP-CRHTFHDECIRKWLLIRNRCPTDMRPVVPDSPD-AGHGA 858
            GG +    +GL ++ ++ L RS         G  A  G    CAICL  +  GEEI  LP C H+FH ECI KWL+ R+ CP+  R + P   D  GH +
Sbjct:   60 GGDSPSPNKGLKKKALQSLPRSTFTTAESTSGAAADDGDSTECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLVSRSSCPSCRRILTPVRCDRCGHAS 159          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1049.11.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LB19_ECTSI3.440e-5560.20Similar to RING finger protein 122 n=1 Tax=Ectocar... [more]
A0A6H5L8B3_9PHAE7.010e-3561.95RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A2I0VU68_9ASPA2.220e-1039.18E3 ubiquitin ligase BIG BROTHER-related n=1 Tax=De... [more]
A0A7S2TJH4_9EUKA9.170e-1033.10Hypothetical protein n=3 Tax=Lotharella oceanica T... [more]
A0A7S4NW69_9EUKA3.690e-946.15Hypothetical protein (Fragment) n=1 Tax=Paramoeba ... [more]
V4ME19_EUTSA4.100e-940.59RING-type domain-containing protein n=11 Tax=Brass... [more]
A0A1Y1WMH7_9FUNG4.740e-945.16RING-type domain-containing protein (Fragment) n=1... [more]
UPI0009E5CCD17.190e-940.21probable E3 ubiquitin-protein ligase HIP1 isoform ... [more]
A0A6P5XBQ7_DURZI1.650e-838.30E3 ubiquitin ligase BIG BROTHER-related-like n=1 T... [more]
D7L9E3_ARALL3.470e-839.00Ring-H2 finger A3A n=3 Tax=Camelineae TaxID=980083... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 803..843
e-value: 4.9E-6
score: 36.1
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 802..842
e-value: 3.4E-11
score: 43.3
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 803..843
score: 11.028731
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 792..856
e-value: 1.3E-15
score: 58.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 211..315
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 533..561
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 252..266
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 479..503
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 480..494
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 619..649
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 614..683
NoneNo IPR availablePANTHERPTHR45931SI:CH211-59O9.10coord: 599..848
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 802..850

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1049contigA-nodosum_M_contig1049:110628..136001 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1049.11.1mRNA_A-nodosum_M_contig1049.11.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1049 110599..136176 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1049.11.1 ID=prot_A-nodosum_M_contig1049.11.1|Name=mRNA_A-nodosum_M_contig1049.11.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=864bp
MAELDEEIVICPSEAVRETSEALRLVDDIRGDLEREARRLARGTGPSVVT
NESIKRDPLIHALHRSSRHIIRLREILRLQADVLLEDYWKEERNVTVLGE
VRKTQSSLLRAQTTANDTYNGLLGELGDPTNAGSSRHAEVQRRIQSCDRA
AAATATALSTVTNTLSDFPARVRRRRRFSTGVSAGGVEQCTRERNRRFTL
ARNLNLPSAGTSVPVRAAPECREDGVPDGSSDGGRGIRRSASAVMSRGSR
KPPAGDSRRDAAAGDGAGTEGRETGPASSFFTHAAPSPSAANERHAAQVP
SPVARGGISKRHQPMTAPVMEERRRLMARASSDRFRGGSGEVGASALVVT
KAKESKGSAEEAHVVRKIRKPTAAEQYAASVNLMHGRSTTASRRRIREFG
EQEGATASTARSARGGAVATTMAARASSHRPTRVYPSFSAGSVSPTEAYA
EIGEQGSAASVSTVRSVRSAAAGRVLNPRPSRMQPSTSAGPSTFTGARAP
GDGVGYRGGGSGGGFGGAHLVPSFSPRPVPMTSVRAGEGAQDDGGECDED
GHGDSNRSERDIRLQQAMEERIAQAILGESNFLYLLDASPSTLFGDATHA
RRRSLMRMHTMGDDVDSPTASLRRSQSASRFGDRSRGSVEGSTSLGAVSR
TPAGMRGDGDVVPTDVHGDEAAAQRLAKREQEAQAREDELLALRLAAREE
ASAERHASRSHLRRRSHWSLSPPLGLHPATAAAVATGGEVSDAVLALQFQ
DIDANDFEALLTLDEQGGVGGRTCGGGRGLSEQVVEDLLRSGKVAAGGLE
ESCAICLVGYEVGEEIATLPCRHTFHDECIRKWLLIRNRCPTDMRPVVPD
SPDAGHGAGRKRC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD