prot_A-nodosum_M_contig1047.26.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1047.26.1
Unique Nameprot_A-nodosum_M_contig1047.26.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length405
Homology
BLAST of mRNA_A-nodosum_M_contig1047.26.1 vs. uniprot
Match: A0A6H5JK83_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK83_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 4.960e-29
Identity = 68/152 (44.74%), Postives = 92/152 (60.53%), Query Frame = 0
Query:  210 DVGALINQLRGVYLSLGKAPIWDGGSSRPGEEFAVVCGFSAALGPLLLERALDLVYGRKLFRTMTSLPLIHVTYMLLVYWQNEVSPFDAHDRFFRMVA------NPETGTITKVELEPFILAMAQRHPDLDSLSLEEVSQYVNTVLAVVFYR 355
            D+  L+ QL+G  L LG A +W GG  R  E F+  CGFSAA GP++L+     VYGR     +T LP+ HV Y    YW+ E+ P DA +RFF++V          +G I + EL  F+LA+A RHPDLD+LS E    YV+TVL ++FY+
Sbjct:  456 DLWPLMFQLQGWSLELGTADVWGGGIEREAEAFSAACGFSAAFGPIVLKLVTTAVYGRVFAGGVTVLPMNHVLYAFGQYWEKEIGPRDATERFFKLVKIDSGTRASSSGRIGREELRQFVLAIALRHPDLDALSPENKFIYVDTVLTILFYK 607          
BLAST of mRNA_A-nodosum_M_contig1047.26.1 vs. uniprot
Match: D7FYR0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYR0_ECTSI)

HSP 1 Score: 125 bits (315), Expect = 8.000e-28
Identity = 65/146 (44.52%), Postives = 89/146 (60.96%), Query Frame = 0
Query:  210 DVGALINQLRGVYLSLGKAPIWDGGSSRPGEEFAVVCGFSAALGPLLLERALDLVYGRKLFRTMTSLPLIHVTYMLLVYWQNEVSPFDAHDRFFRMVANPETGTITKVELEPFILAMAQRHPDLDSLSLEEVSQYVNTVLAVVFYR 355
            D+  L+ QL+G  L LG A +W GG  R  E F+  CGFSAA GP++L+     VYGR     ++ LP+ HV Y    YW+ E+ P DA +RFF++V         K EL  F+LA+A RHPDLD+L  +  S YV+TVL ++FY+
Sbjct:  460 DLWPLMVQLQGWSLELGTADVWGGGVEREAEAFSAACGFSAAFGPIVLKLVTTAVYGRVFAGGVSVLPMDHVVYAFGQYWEKEIGPRDATERFFKLV---------KEELRRFVLAIALRHPDLDALPPDNKSIYVDTVLTILFYK 596          
BLAST of mRNA_A-nodosum_M_contig1047.26.1 vs. uniprot
Match: A0A448ZK08_9STRA (EF-hand domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZK08_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 6.250e-9
Identity = 43/143 (30.07%), Postives = 73/143 (51.05%), Query Frame = 0
Query:  245 VCGFSAALGPLLLERALDLVYGRKLFRTMTSLPLIHVTYMLLVYWQNEVSPFDAHDRFFRMVANPETGTITKVELEPFILAMAQRHPDLDSLS--LEEVSQYVNTVLAVVFYRHSNC--GVLRSKDLKKSGFVASFNAVGRLE 383
            +C F +     L +R + L         +T++ L  + +    YW+ E+ PFDA +RFFR+V  P+   I + +  P+I A+   HP L+ LS   E   +Y  TV+  +FY  + C  G + S+ +++S  + SF+ V   E
Sbjct:  194 ICHFPSFFNGPLYQRIMQLWNIDHPHENITTVTLSTIEW----YWKKEMEPFDASERFFRLVKQPDEDCILRDDFLPYIKALLNDHPGLEFLSNHAEFQEKYAVTVITRIFYSVNKCHSGRITSRQVRRSDLLDSFSQVDEEE 332          
BLAST of mRNA_A-nodosum_M_contig1047.26.1 vs. uniprot
Match: A0A6U5KTW5_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5KTW5_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 6.950e-8
Identity = 32/100 (32.00%), Postives = 57/100 (57.00%), Query Frame = 0
Query:  288 YWQNEVSPFDAHDRFFRMVANPETGTITKVELEPFILAMAQRHPDLDSLS--LEEVSQYVNTVLAVVFYRHSNC--GVLRSKDLKKSGFVASFNAVGRLE 383
            +W +E++P+D H+RFFR+V  P+   I + +  P++  +   HP LD LS   E   +Y  TV+  +FY  + C  G +  + +++S  + +F+AV   E
Sbjct:  219 FWNDEMAPYDRHERFFRLVKRPDRRYIHQEDFHPYVQELLDYHPGLDFLSNHTEFQEKYAVTVITRIFYVVNRCHNGKITVRQIRRSNLLDAFHAVDEEE 318          
BLAST of mRNA_A-nodosum_M_contig1047.26.1 vs. uniprot
Match: A0A7S1BWJ4_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BWJ4_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 8.370e-8
Identity = 32/100 (32.00%), Postives = 57/100 (57.00%), Query Frame = 0
Query:  288 YWQNEVSPFDAHDRFFRMVANPETGTITKVELEPFILAMAQRHPDLDSLS--LEEVSQYVNTVLAVVFYRHSNC--GVLRSKDLKKSGFVASFNAVGRLE 383
            +W +E++P+D H+RFFR+V  P+   I + +  P++  +   HP LD LS   E   +Y  TV+  +FY  + C  G +  + +++S  + +F+AV   E
Sbjct:  219 FWNDEMAPYDRHERFFRLVKRPDRRYIHQEDFHPYVQELLDYHPGLDFLSNHTEFQEKYAVTVITRIFYVVNRCHNGKITVRQIRRSNLLDAFHAVDEEE 318          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1047.26.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JK83_9PHAE4.960e-2944.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYR0_ECTSI8.000e-2844.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A448ZK08_9STRA6.250e-930.07EF-hand domain-containing protein n=1 Tax=Pseudo-n... [more]
A0A6U5KTW5_9STRA6.950e-832.00Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S1BWJ4_9STRA8.370e-832.00Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041534PP2A regulatory subunit B'', EF-hand domainPFAMPF17958EF-hand_13coord: 297..379
e-value: 7.3E-10
score: 38.5
NoneNo IPR availableGENE3D1.10.238.220coord: 288..389
e-value: 4.5E-8
score: 34.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1047contigA-nodosum_M_contig1047:205256..224447 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1047.26.1mRNA_A-nodosum_M_contig1047.26.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1047 187790..224530 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1047.26.1 ID=prot_A-nodosum_M_contig1047.26.1|Name=mRNA_A-nodosum_M_contig1047.26.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=405bp
MIASMTVLDEADMIACEDFGSRTVKEEEETITATMKEEETLASDDVHPRT
LMAAVLVVEVAETEGMGTALSGAEVAMLNEANMMANEDIRSRTVKEEEET
ITAAMKEVETIATDDIQPRTPMTAASTGVEAMAGEVDGPRVIWNVKDAMA
VGEVVDNMPPKEARYNFRSAATTYPGFAGRWTPDAHLQFCGKHIQVQGQQ
GQRQRNDNSDVGALINQLRGVYLSLGKAPIWDGGSSRPGEEFAVVCGFSA
ALGPLLLERALDLVYGRKLFRTMTSLPLIHVTYMLLVYWQNEVSPFDAHD
RFFRMVANPETGTITKVELEPFILAMAQRHPDLDSLSLEEVSQYVNTVLA
VVFYRHSNCGVLRSKDLKKSGFVASFNAVGRLEMSLEVCSRQVCMYVCMY
GHHI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041534EF-hand_13