prot_A-nodosum_M_contig10448.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig10448.1.1
Unique Nameprot_A-nodosum_M_contig10448.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length186
Homology
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BLAST of mRNA_A-nodosum_M_contig10448.1.1 vs. uniprot
Match: A0A6H5L089_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L089_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 1.270e-22
Identity = 63/159 (39.62%), Postives = 90/159 (56.60%), Query Frame = 0 
Query:    2 WHLRFRAHLDGMGLGYTLDHAATP--VPVKG--DQRDLILRYGEQPVQHAQAAWACLLDATAGAAFEERVLSAVTVRDAWCQILSWTGPSSEAETFFLERQLETVPNYGDENPKFFFSRVDQLLTRLRSANIHKTERQIVNILVRNLSDHYEIEKRSRL 156
            W  R R  L   GL  TLDH      V + G  D+  L   +G   V     AW  L+++T+G+  EE + +   V +AW  I  W+ P+++AE   LERQLETV     ENPK FF+RVD ++  +R+  I K+ERQIV  +VR LS  Y++E+++ L
Sbjct:  395 WSRRMRTFLAVEGLEQTLDHQPPTGYVHIIGCPDRNYLNRIHGAPLVTAHLRAWGYLVESTSGSDIEETLFACSCVPEAWTAIREWSLPTTDAEQRLLERQLETVEMSPGENPKLFFARVDGIVNTMRAVGIEKSERQIVQTIVRQLSSDYDVERKTTL 553
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10448.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L089_9PHAE1.270e-2239.62Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig10448contigA-nodosum_M_contig10448:12274..12831 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig10448.1.1mRNA_A-nodosum_M_contig10448.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig10448 12271..12831 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig10448.1.1 ID=prot_A-nodosum_M_contig10448.1.1|Name=mRNA_A-nodosum_M_contig10448.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=186bp
MWHLRFRAHLDGMGLGYTLDHAATPVPVKGDQRDLILRYGEQPVQHAQAA
WACLLDATAGAAFEERVLSAVTVRDAWCQILSWTGPSSEAETFFLERQLE
TVPNYGDENPKFFFSRVDQLLTRLRSANIHKTERQIVNILVRNLSDHYEI
EKRSRLDSPLLRRQDVEHIVRASWATRKTRQLEHRS
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