prot_A-nodosum_M_contig1044.3.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1044.3.1
Unique Nameprot_A-nodosum_M_contig1044.3.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length508
Homology
BLAST of mRNA_A-nodosum_M_contig1044.3.1 vs. uniprot
Match: A0A6H5JG83_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG83_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 1.220e-9
Identity = 47/114 (41.23%), Postives = 63/114 (55.26%), Query Frame = 0
Query:    2 QLQLASLQFCVVCRSVSTLHLIMEEGMCTLLFED--APASDIKAK--------KLCRTRVPTIQPLKLTWMLPKSCLKRFSSEALENVEQLTFWD---KFNDEVNDVAWPSALK 102
            QLQLAS++FCV CRSVSTLHL +EEG    L+ D  +  SD            +    RVP  +P ++TW LP S L   S +A +N+E ++F D   +  D  + VA P  LK
Sbjct:   19 QLQLASVEFCVACRSVSTLHLTVEEGTPRHLWADTWSDQSDXXXXXXXXXXXGRSVLVRVPPFRPREVTWNLPPSMLSEASKDAFKNLECMSFSDAVERSGDSFDGVALPRGLK 132          
BLAST of mRNA_A-nodosum_M_contig1044.3.1 vs. uniprot
Match: D8LRD1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRD1_ECTSI)

HSP 1 Score: 61.6 bits (148), Expect = 1.140e-6
Identity = 39/103 (37.86%), Postives = 56/103 (54.37%), Query Frame = 0
Query:    1 MQLQLASLQFCVVCRSVSTLHLIMEEGMCTLLFEDAPASDIKAKKLCRT-RVPTIQPLKLTWMLPKSCLKRFSSEALENVEQLTFWDKFNDEVNDVAWPSALK 102
            MQLQLASLQ C+ CRSV  LH+ ++    T L+   P  + +  K  R  RVP +Q   +TW L    L   S E+L +V    F ++  D+V  + WP A++
Sbjct:    1 MQLQLASLQLCISCRSVPRLHVRVDRSTPTPLWARPPERETRRAKQRRVGRVPVVQARVVTWKLSSQRLG-LSGESLASVPCFIFGNQGIDQVGGMRWPPAIQ 102          
BLAST of mRNA_A-nodosum_M_contig1044.3.1 vs. uniprot
Match: D8LSQ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSQ7_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 2.480e-6
Identity = 42/104 (40.38%), Postives = 62/104 (59.62%), Query Frame = 0
Query:    3 LQLASLQFCVVCRSVSTLHLIMEEGMCTLLF-EDAPASDIKAKKLCR-TRVPTIQPLKLTWMLPKSCLKRFS-SEALENVEQLTFWD-KFNDEVNDVAWPSALK 102
            LQLASLQFCV CRS ST+ L ++      L+ +D+     ++ ++CR +RVP +   ++ W+LP S L   S S  L N++ L+F    FND ++ VA P  LK
Sbjct:    6 LQLASLQFCVACRSASTVRLRIDTDTPRHLWAKDSGPQARRSARVCRASRVPALHAREVLWILPASMLNATSDSLKLSNLQLLSFVGANFNDSLSGVALPRGLK 109          
BLAST of mRNA_A-nodosum_M_contig1044.3.1 vs. uniprot
Match: D7FXS2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXS2_ECTSI)

HSP 1 Score: 55.1 bits (131), Expect = 5.170e-5
Identity = 39/105 (37.14%), Postives = 56/105 (53.33%), Query Frame = 0
Query:    2 QLQLASLQFCVVCRSVSTLHLIMEEG-MCTLLFEDAPASDIK--AKKLCRTRVPTIQPLKLTWMLPKSCLKRFSSEALENVEQLTFWDKFNDEVNDVAWPSALKR 103
            +LQLASLQFCV CR V +LHL +    +   L+ D  A++ +  AK+   T VP  +P ++TW  P   L   S   L   +   F  + +  V+DV WP  LK+
Sbjct:   30 ELQLASLQFCVKCRKVPSLHLAVNNAHVPARLWNDHAATEARTGAKRPSTTPVPVFRPREVTWGRPAWLL---SDICLVFAKVERFLVRQDTVVDDVVWPCRLKK 131          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1044.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JG83_9PHAE1.220e-941.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRD1_ECTSI1.140e-637.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LSQ7_ECTSI2.480e-640.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FXS2_ECTSI5.170e-537.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008615FNIPPFAMPF05725FNIPcoord: 264..306
e-value: 3.5E-8
score: 33.5
coord: 462..504
e-value: 1.8E-5
score: 24.8
coord: 176..217
e-value: 3.2E-7
score: 30.4
coord: 330..372
e-value: 5.2E-7
score: 29.7
coord: 418..459
e-value: 5.6E-6
score: 26.4
coord: 132..174
e-value: 5.9E-9
score: 36.0
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 141..313
e-value: 1.3E-5
score: 25.8
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 262..376
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 176..311
coord: 285..399
NoneNo IPR availablePANTHERPTHR32134:SF144FNIP REPEAT-CONTAINING PROTEINcoord: 285..399
coord: 373..502
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 373..502
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 83..200
NoneNo IPR availablePANTHERPTHR32134:SF144FNIP REPEAT-CONTAINING PROTEINcoord: 176..311
NoneNo IPR availablePANTHERPTHR32134:SF144FNIP REPEAT-CONTAINING PROTEINcoord: 83..200
coord: 262..376
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 77..370

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1044contigA-nodosum_M_contig1044:111235..112758 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1044.3.1mRNA_A-nodosum_M_contig1044.3.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1044 110599..112766 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1044.3.1 ID=prot_A-nodosum_M_contig1044.3.1|Name=mRNA_A-nodosum_M_contig1044.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=508bp
MQLQLASLQFCVVCRSVSTLHLIMEEGMCTLLFEDAPASDIKAKKLCRTR
VPTIQPLKLTWMLPKSCLKRFSSEALENVEQLTFWDKFNDEVNDVAWPSA
LKRLTFGHRFNQAVDKVMWPALLQQLTFEGYFNQPIDRVVWPVSLQKLEF
GHDFNQPIGRVVWPSSLQQLKFKCSFNQPIEGVVWPASLQKLEFGGCFNQ
PIGRVVWPASLQHLDLGEIFDQAIDGVMWPASLRQLEFGWAFNKAINGVI
WPASLHQLKFKYYFNQPIDGVLWPASLQKLEFGYHFNQPIGRVVWPVSLQ
ELKFRYGFNQPIEGVVWPASLQKLEFGCLFNQPIGRVVWPASLQRLDFGS
DFNQAIDSVLWPASLQQLNFGEDFDQAIDGVVWPASLQQLVLGVYFNQAI
DGVMWPASLRQLKLGTHFDQAIDGVMWPASLQQLEFGISFNQPIDGVVWP
ASLQQLKFGICFNQPIDRVIWPASLQLLKFGISFDQPIGGVVWPASLRRL
EFGTCIK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008615FNIP
IPR032675LRR_dom_sf