prot_A-nodosum_M_contig1042.6.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1042.6.1
Unique Nameprot_A-nodosum_M_contig1042.6.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length534
Homology
BLAST of mRNA_A-nodosum_M_contig1042.6.1 vs. uniprot
Match: A0A6H5L0W0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L0W0_9PHAE)

HSP 1 Score: 434 bits (1116), Expect = 2.640e-144
Identity = 250/539 (46.38%), Postives = 342/539 (63.45%), Query Frame = 0
Query:    1 MSDSSTTLSGEWWESISAYENNYVPDSFTPSSSVEANHDLLSGLRDNDFDITNQDYNYGLLTLAIVFLVAGVLACCLLPCIYTCLGKSHKERLAERLRIGHSSNTKLRGNLIMVVAVVAAIGTAVGAVWGLATTDNGLTVIENDTQEITDDLRAVLSLPNDTSKALDGLSTSYDSLLENLDACTYSVSGVQGTLTYGADLVPSSEVEDFMANVENAVESLDSETLDKLADDVQDVSDAVETTKGIRKGVVWPVLSLSILMIMIFLVISLGVYGIIAFKMHDCTPIANWVSPCSIFLAVIIWLSAASAVTLSALTGDFCIDPDTNVETLLVTDETKDALDETLTGLIVYYTGDCTSDNVAIDVIIDAQTIAISFISSTLPSLYELADACSDISPFVQDVDDSMRELWAVLQNAGELTSCENLNAPYQDAVYNELCTSLPAGLLGFWVSCVILTVLLLLLAVLWSNMLKQIRTDDHAAVIEEEQRRWTSGTWHSGGWGSRLQSGTRDSRGTQNVVTGVPA---------QRAVEIANPQRA 530
            M+ +STT    W++ IS Y ++Y P +FTP  SVEANHDLL GLR+NDFD+ +  Y+ GL+TL IVFLVAG+L           LG S +ERL ER++ G    T   GN++MV+A VAAI +A GA+WGL   D+GLT IE+ TQ +  D+  +L+L NDTS ALD ++ SY++L E++D C        G +   + L+ + ++    A+V+  ++ +  +   +LADDVQ +SDAV  T+G RKG++WPVL LS++    F+ +S+  Y  +AF   DC P +  ++PC+IF+AV+IW+ AA AV+LSALTGDFCIDPD N   L +TD T    D  +  LI YYTGDCTS+N A+D II AQ +A+  I S +P+LY+L  ACSD++  VQ +D+S+   W +L++AGEL+SCENLN  YQ AVY+ELC  LP GLLGFWVSC  LTVLLL+LA+ W  ML+Q  T++ A+  E   R+         GW   L    R SR  +N V   PA         QR V +  PQ A
Sbjct:    1 MTTTSTTGGDAWYDKISVYSSDYEPATFTPGPSVEANHDLLDGLRENDFDVEDAQYSAGLVTLIIVFLVAGLLXXXXXXXXXXXLGTSRQERLRERMKFG--KQTHYGGNILMVLASVAAIASAAGAIWGLQRADSGLTNIEDATQNMATDMLTILNLANDTSVALDQVTASYEALQESVDGCD------NGAIL--SSLLDAFDINSLTASVQAEIDDVSEDNFGELADDVQAISDAVSDTEGARKGLLWPVLILSLMFTAFFVAVSVSTYECVAFGYRDCAPASCCINPCTIFVAVVIWICAALAVSLSALTGDFCIDPDANANEL-ITDNT----DGEIADLITYYTGDCTSENAAVDAIITAQEVAVPIIQSVVPTLYQLEAACSDLAEPVQTLDNSLESFWTILEDAGELSSCENLNGLYQAAVYDELCKGLPQGLLGFWVSCAFLTVLLLILAIQWGRMLRQQTTEEDASTAEAMNRQ-------RAGW---LVVSKRFSR--RNFVANPPAPPHGASSHVQRPVALERPQHA 512          
BLAST of mRNA_A-nodosum_M_contig1042.6.1 vs. uniprot
Match: D7FQM7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQM7_ECTSI)

HSP 1 Score: 139 bits (349), Expect = 3.250e-33
Identity = 94/260 (36.15%), Postives = 145/260 (55.77%), Query Frame = 0
Query:   59 GLLTLAIVFLVAGVLACCLLPCIYTCLGKSHKERLAERLRIGHSSNTKLRGNLIMVVAVVAAIGTAVGAVWGLATTDNGLTVIENDTQEITDDLRAVLSLPNDTSKALDGLSTSYDSL------LENLDACTYSVSGVQGTLTYGADLVPSSEVEDFMANVENAVESLDSETLDKLADDVQDVSDAVETTKGIRKGVVWPVLSLSILMIMIFLVISLGVYGIIAFKMHDC-TPIANWVSPCSIFLAVIIWLSAASAVTLS 311
            GLLTLA +F+ AG+LAC +LPC+Y C  KS +  L  RL  G   +    G L+MV+   AA+     A+ GL   D+G+ VIE+ T+ I  D+  ++ LP DT+  L  +S SYD L       EN D     V+G    L +G+            + V+ A++ +D  +L  +A  VQD+SDA+ TTK +R+ +VWP + L+++ + +F++IS   Y  +A     C  P     +P  +FLAV+++L AAS ++LS
Sbjct:    7 GLLTLASIFVAAGLLACAVLPCLYCCFRKSRQAHLVTRLENG--PHRHCAGGLLMVLVSWAALACCSSAIAGLEKADSGMLVIEDRTEAIAKDVLEIIGLPADTAVGLGLVSDSYDVLEASVGDCENPDIAQAIVAG----LDFGS----------LASEVQTAIDEIDRTSLADIAKQVQDISDAMYTTKVLRRTIVWPTIILALVFVALFILISCTTYEAVACARPSCRAPCTGGFAPFVVFLAVVVYLCAASVISLS 250          
BLAST of mRNA_A-nodosum_M_contig1042.6.1 vs. uniprot
Match: D7FQM8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQM8_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 4.170e-7
Identity = 25/47 (53.19%), Postives = 33/47 (70.21%), Query Frame = 0
Query:   12 WWESISAYENNYVPDSFTPSSSVEANHDLLSGLRDNDFDITNQDYNY 58
            WW+ I  +E+++VP +FTP  SVEANH LL   R+ DFDI  +D NY
Sbjct:    7 WWQEIELFESDFVPATFTPGESVEANHALLRAFREQDFDI--RDLNY 51          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1042.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L0W0_9PHAE2.640e-14446.38Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FQM7_ECTSI3.250e-3336.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FQM8_ECTSI4.170e-753.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006990TweetyPFAMPF04906Tweetycoord: 46..469
e-value: 1.5E-10
score: 40.4
IPR006990TweetyPANTHERPTHR12424TWEETY-RELATEDcoord: 46..480
NoneNo IPR availablePANTHERPTHR12424:SF8PROTEIN TWEETYcoord: 46..480

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1042contigA-nodosum_M_contig1042:43747..55214 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1042.6.1mRNA_A-nodosum_M_contig1042.6.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1042 43530..56812 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1042.6.1 ID=prot_A-nodosum_M_contig1042.6.1|Name=mRNA_A-nodosum_M_contig1042.6.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=534bp
MSDSSTTLSGEWWESISAYENNYVPDSFTPSSSVEANHDLLSGLRDNDFD
ITNQDYNYGLLTLAIVFLVAGVLACCLLPCIYTCLGKSHKERLAERLRIG
HSSNTKLRGNLIMVVAVVAAIGTAVGAVWGLATTDNGLTVIENDTQEITD
DLRAVLSLPNDTSKALDGLSTSYDSLLENLDACTYSVSGVQGTLTYGADL
VPSSEVEDFMANVENAVESLDSETLDKLADDVQDVSDAVETTKGIRKGVV
WPVLSLSILMIMIFLVISLGVYGIIAFKMHDCTPIANWVSPCSIFLAVII
WLSAASAVTLSALTGDFCIDPDTNVETLLVTDETKDALDETLTGLIVYYT
GDCTSDNVAIDVIIDAQTIAISFISSTLPSLYELADACSDISPFVQDVDD
SMRELWAVLQNAGELTSCENLNAPYQDAVYNELCTSLPAGLLGFWVSCVI
LTVLLLLLAVLWSNMLKQIRTDDHAAVIEEEQRRWTSGTWHSGGWGSRLQ
SGTRDSRGTQNVVTGVPAQRAVEIANPQRAERG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006990Tweety