prot_A-nodosum_M_contig1042.4.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1042.4.1
Unique Nameprot_A-nodosum_M_contig1042.4.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length538
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig1042.4.1 vs. uniprot
Match: A0A6H5L0W0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L0W0_9PHAE)

HSP 1 Score: 406 bits (1043), Expect = 3.000e-133
Identity = 230/533 (43.15%), Postives = 329/533 (61.73%), Query Frame = 0 
Query:    9 WWQNISAYQSDYEPRSYNPTSEVVADHNLLEGLRENEFDTKDSSYNYGLLTLGLVFLVSGVVASCLLPFLYTRFVRKSMKDRIEERLKFGRRSHIEGNLLMVLVSVMAVACASGVIWGFQRADSVLTKVAGGTQGMTSDVVAVLTLPTDTADALDGVSTSYDALADGVENCTRNAVEGLGIEIPFSDVLDEIFDQLSTTSDVVGSLVDDVQDEVDDLNEXXXXXXXXXXXGVTDAIDTTEGIRKGLVWPIISLSILMIVIFVAIALGTYEFVAWGIKDCGCISCFVFPCAIFIVVIIWLITVAAVSLSALSGDFCIDPDPSAQTVVLNNSEEGLNSTEEELLAEIVIYYTGGCNTSNSILDLLTISQEVAVPLIQGIMVTSTEISDQLMSVECDVSSFVNELNQTLWDFWVILENAANLTSCENFNGQYQSVVYDEFCDNLPRALLGFWVSGVILTVLLLMLAALWNRMLRQKRADDEADGIEARSSWSLSGMMKSSRWSRGN--AKEPAE----HTNVTRPVEYATPQDTSR 535
            W+  IS Y SDYEP ++ P   V A+H+LL+GLREN+FD +D+ Y+ GL+TL +VFLV+G++            +  S ++R+ ER+KFG+++H  GN+LMVL SV A+A A+G IWG QRADS LT +   TQ M +D++ +L L  DT+ ALD V+ SY+AL + V+ C   A+         S +LD  FD        + SL   VQ E+DD++E            ++DA+  TEG RKGL+WP++ LS++    FVA+++ TYE VA+G +DC   SC + PC IF+ V+IW+    AVSLSAL+GDFCIDPD +A  ++ +N       T+ E+ A+++ YYTG C + N+ +D +  +QEVAVP+IQ ++ T      QL +   D++  V  L+ +L  FW ILE+A  L+SCEN NG YQ+ VYDE C  LP+ LLGFWVS   LTVLLL+LA  W RMLRQ+  +++A   EA +      ++ S R+SR N  A  PA      ++V RPV    PQ  ++
Sbjct:   12 WYDKISVYSSDYEPATFTPGPSVEANHDLLDGLRENDFDVEDAQYSAGLVTLIIVFLVAGLLXXXXXXX-XXXXLGTSRQERLRERMKFGKQTHYGGNILMVLASVAAIASAAGAIWGLQRADSGLTNIEDATQNMATDMLTILNLANDTSVALDQVTASYEALQESVDGCDNGAI--------LSSLLDA-FD--------INSLTASVQAEIDDVSEDNFGELADDVQAISDAVSDTEGARKGLLWPVLILSLMFTAFFVAVSVSTYECVAFGYRDCAPASCCINPCTIFVAVVIWICAALAVSLSALTGDFCIDPDANANELITDN-------TDGEI-ADLITYYTGDCTSENAAVDAIITAQEVAVPIIQSVVPTLY----QLEAACSDLAEPVQTLDNSLESFWTILEDAGELSSCENLNGLYQAAVYDELCKGLPQGLLGFWVSCAFLTVLLLILAIQWGRMLRQQTTEEDASTAEAMNRQRAGWLVVSKRFSRRNFVANPPAPPHGASSHVQRPVALERPQHATQ 514
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1042.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L0W0_9PHAE3.000e-13343.15Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006990TweetyPFAMPF04906Tweetycoord: 44..488
e-value: 5.9E-9
score: 35.1
IPR006990TweetyPANTHERPTHR12424TWEETY-RELATEDcoord: 43..480
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 505..537
NoneNo IPR availablePANTHERPTHR12424:SF8PROTEIN TWEETYcoord: 43..480

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1042contigA-nodosum_M_contig1042:18385..30685 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1042.4.1mRNA_A-nodosum_M_contig1042.4.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1042 18013..32417 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1042.4.1 ID=prot_A-nodosum_M_contig1042.4.1|Name=mRNA_A-nodosum_M_contig1042.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=538bp
MSSDNNNNWWQNISAYQSDYEPRSYNPTSEVVADHNLLEGLRENEFDTKD
SSYNYGLLTLGLVFLVSGVVASCLLPFLYTRFVRKSMKDRIEERLKFGRR
SHIEGNLLMVLVSVMAVACASGVIWGFQRADSVLTKVAGGTQGMTSDVVA
VLTLPTDTADALDGVSTSYDALADGVENCTRNAVEGLGIEIPFSDVLDEI
FDQLSTTSDVVGSLVDDVQDEVDDLNEDVLNQLVDDVQGVTDAIDTTEGI
RKGLVWPIISLSILMIVIFVAIALGTYEFVAWGIKDCGCISCFVFPCAIF
IVVIIWLITVAAVSLSALSGDFCIDPDPSAQTVVLNNSEEGLNSTEEELL
AEIVIYYTGGCNTSNSILDLLTISQEVAVPLIQGIMVTSTEISDQLMSVE
CDVSSFVNELNQTLWDFWVILENAANLTSCENFNGQYQSVVYDEFCDNLP
RALLGFWVSGVILTVLLLMLAALWNRMLRQKRADDEADGIEARSSWSLSG
MMKSSRWSRGNAKEPAEHTNVTRPVEYATPQDTSRWS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006990Tweety