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Homology
BLAST of mRNA_A-nodosum_M_contig1042.4.1 vs. uniprot
Match: A0A6H5L0W0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L0W0_9PHAE) HSP 1 Score: 408 bits (1049), Expect = 2.220e-126 Identity = 230/533 (43.15%), Postives = 329/533 (61.73%), Query Frame = 1
Query: 397 WWQNISAYQSDYEPRSYNPTSEVVADHNLLEGLRENEFDTKDSSYNYGLLTLGLVFLVSGVVASCLLPFLYTRFVRKSMKDRIEERLKFGRRSHIEGNLLMVLVSVMAVACASGVIWGFQRADSVLTKVAGGTQGMTSDVVAVLTLPTDTADALDGVSTSYDALADGVENCTRNAVEGLGIEIPFSDVLDEIFDQLSTTSDVVGSLVDDVQDEVDDLNEXXXXXXXXXXXGVTDAIDTTEGIRKGLVWPIISLSILMIVIFVAIALGTYEFVAWGIKDCGCISCFVFPCAIFIVVIIWLITVAAVSLSALSGDFCIDPDPSAQTVVLNNSEEGLNSTEEELLAEIVIYYTGGCNTSNSILDLLTISQEVAVPLIQGIMVTSTEISDQLMSVECDVSSFVNELNQTLWDFWVILENAANLTSCENFNGQYQSVVYDEFCDNLPRALLGFWVSGVILTVLLLMLAALWNRMLRQKRADDEADGIEARSSWSLSGMMKSSRWSRGN--AKEPAE----HTNVTRPVEYATPQDTSR 1977
W+ IS Y SDYEP ++ P V A+H+LL+GLREN+FD +D+ Y+ GL+TL +VFLV+G++ + S ++R+ ER+KFG+++H GN+LMVL SV A+A A+G IWG QRADS LT + TQ M +D++ +L L DT+ ALD V+ SY+AL + V+ C A+ S +LD FD + SL VQ E+DD++E ++DA+ TEG RKGL+WP++ LS++ FVA+++ TYE VA+G +DC SC + PC IF+ V+IW+ AVSLSAL+GDFCIDPD +A ++ +N T+ E+ A+++ YYTG C + N+ +D + +QEVAVP+IQ ++ T QL + D++ V L+ +L FW ILE+A L+SCEN NG YQ+ VYDE C LP+ LLGFWVS LTVLLL+LA W RMLRQ+ +++A EA + ++ S R+SR N A PA ++V RPV PQ ++
Sbjct: 12 WYDKISVYSSDYEPATFTPGPSVEANHDLLDGLRENDFDVEDAQYSAGLVTLIIVFLVAGLLXXXXXXX-XXXXLGTSRQERLRERMKFGKQTHYGGNILMVLASVAAIASAAGAIWGLQRADSGLTNIEDATQNMATDMLTILNLANDTSVALDQVTASYEALQESVDGCDNGAI--------LSSLLDA-FD--------INSLTASVQAEIDDVSEDNFGELADDVQAISDAVSDTEGARKGLLWPVLILSLMFTAFFVAVSVSTYECVAFGYRDCAPASCCINPCTIFVAVVIWICAALAVSLSALTGDFCIDPDANANELITDN-------TDGEI-ADLITYYTGDCTSENAAVDAIITAQEVAVPIIQSVVPTLY----QLEAACSDLAEPVQTLDNSLESFWTILEDAGELSSCENLNGLYQAAVYDELCKGLPQGLLGFWVSCAFLTVLLLILAIQWGRMLRQQTTEEDASTAEAMNRQRAGWLVVSKRFSRRNFVANPPAPPHGASSHVQRPVALERPQHATQ 514
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 3718 |
| Hectar predicted targeting category | other localisation |
| Exons | 8 |
| Cds size | 1614 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866414.3325179-UTR-A-nodosum_M_contig1042:18012..18384 | 1680866414.3325179-UTR-A-nodosum_M_contig1042:18012..18384 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig1042 18013..18384 + |
| 1680866414.5162456-UTR-A-nodosum_M_contig1042:30685..32417 | 1680866414.5162456-UTR-A-nodosum_M_contig1042:30685..32417 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig1042 30686..32417 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866414.3463783-CDS-A-nodosum_M_contig1042:18384..18544 | 1680866414.3463783-CDS-A-nodosum_M_contig1042:18384..18544 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1042 18385..18544 + |
| 1680866414.3559968-CDS-A-nodosum_M_contig1042:19602..19723 | 1680866414.3559968-CDS-A-nodosum_M_contig1042:19602..19723 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1042 19603..19723 + |
| 1680866414.3678017-CDS-A-nodosum_M_contig1042:27928..28097 | 1680866414.3678017-CDS-A-nodosum_M_contig1042:27928..28097 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1042 27929..28097 + |
| 1680866414.3805876-CDS-A-nodosum_M_contig1042:28536..28794 | 1680866414.3805876-CDS-A-nodosum_M_contig1042:28536..28794 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1042 28537..28794 + |
| 1680866414.4747245-CDS-A-nodosum_M_contig1042:28967..29208 | 1680866414.4747245-CDS-A-nodosum_M_contig1042:28967..29208 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1042 28968..29208 + |
| 1680866414.4855857-CDS-A-nodosum_M_contig1042:29498..29722 | 1680866414.4855857-CDS-A-nodosum_M_contig1042:29498..29722 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1042 29499..29722 + |
| 1680866414.4939585-CDS-A-nodosum_M_contig1042:29992..30229 | 1680866414.4939585-CDS-A-nodosum_M_contig1042:29992..30229 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1042 29993..30229 + |
| 1680866414.5076957-CDS-A-nodosum_M_contig1042:30481..30685 | 1680866414.5076957-CDS-A-nodosum_M_contig1042:30481..30685 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1042 30482..30685 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1042.4.1 >prot_A-nodosum_M_contig1042.4.1 ID=prot_A-nodosum_M_contig1042.4.1|Name=mRNA_A-nodosum_M_contig1042.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=538bp
MSSDNNNNWWQNISAYQSDYEPRSYNPTSEVVADHNLLEGLRENEFDTKD
SSYNYGLLTLGLVFLVSGVVASCLLPFLYTRFVRKSMKDRIEERLKFGRR
SHIEGNLLMVLVSVMAVACASGVIWGFQRADSVLTKVAGGTQGMTSDVVA
VLTLPTDTADALDGVSTSYDALADGVENCTRNAVEGLGIEIPFSDVLDEI
FDQLSTTSDVVGSLVDDVQDEVDDLNEDVLNQLVDDVQGVTDAIDTTEGI
RKGLVWPIISLSILMIVIFVAIALGTYEFVAWGIKDCGCISCFVFPCAIF
IVVIIWLITVAAVSLSALSGDFCIDPDPSAQTVVLNNSEEGLNSTEEELL
AEIVIYYTGGCNTSNSILDLLTISQEVAVPLIQGIMVTSTEISDQLMSVE
CDVSSFVNELNQTLWDFWVILENAANLTSCENFNGQYQSVVYDEFCDNLP
RALLGFWVSGVILTVLLLMLAALWNRMLRQKRADDEADGIEARSSWSLSG
MMKSSRWSRGNAKEPAEHTNVTRPVEYATPQDTSRWS* back to topmRNA from alignment at A-nodosum_M_contig1042:18013..32417+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig1042.4.1 ID=mRNA_A-nodosum_M_contig1042.4.1|Name=mRNA_A-nodosum_M_contig1042.4.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=14405bp|location=Sequence derived from alignment at A-nodosum_M_contig1042:18013..32417+ (Ascophyllum nodosum dioecious)
GTCTAGGCGCGTTCTGATTTTTCTTTAAAAACAAAGACAAAAGACATGAG
CTTGGATTACAGCTCAATTCGTTACATTGGGTCCAGGAGCGGATGGGTGT
CGATGAAAGAAATATTGATGTAAAAATTATGGAAAATTGTCCAATAATTA
TTCCTAAATAAAGTACATATTTACAAAGTAGGAATTTATGTTTGTTGTGA
ACGTACTTGCCCCGACCCTTTTACGGTTAATCTACTGCTTATCAACTCTG
AGGTCCCCAGCTTGCATTACGTGCGGCCCGCTAGAAAAACGTTGATTTCC
AACTTGCCCACCGCCTACACCACCATTCGATCGAGACGATCGAGAAAACT
ACTACGGGCAGCTCAAGACATCATGTCCTCCGACAATAATAACAACTGGT
GGCAAAATATATCGGCCTATCAGAGCGATTATGAACCACGTTCGTATAAC
CCAACCTCCGAGGTGGTGGCCGACCACAATCTGCTGGAGGGGCTGAGAGA
AAATGAGTTCGACACCAAAGATTCGTCATACAGTGAGTACAACATACTAC
TGTACTGCTGTGCAATACGTAAAATTACTGACGGGTCCACGTGATGTACT
GTACAGTCCAGTAGTACAGCGCCCACGCATCTATGACATGTCTGTGTATA
CGTAACCTGCTGTACAGCACACAAGGGGTACAATCATTGATCAAAGTCCA
TTAAGTAACAAAGATGCCGCGCAAAGCTGCATTGTGCAGCAGCGGCAGCA
GCGCGCGTGCGCGCTGCTGCAGATCATTTTTATCAAGGGATTGGCATATA
CTTTTAGGGTCACTCAGCTCAAGCCCTGGTGGACTCGCAATGATGCCCAT
AGATGAAGTTACCCACGGTTTGGTTTGATAAGCGTCCCGTACCAGGTAGT
TACAGAATGAAGCGGATTGCCGGAACTCGAATTTTCTGTCGAGAATCACT
TGGCATCAAGTCAACGAAGCTCCCCCAGAAACCCGTTTGTCTTATGCTGT
CAGCCTCAGAGCTGAGTCACGCTGCACGTGCTTCTTGTTTGATCGACCTT
ACAACTGTAGTTTGTTTCGTCAAAACAAACACAGGAGTATGTAGTCCCTG
TAAAGTACCGGTAGTGCAGTAGTGCTATGTCATACTCTGTTGTACCTGGT
ACTATTTTCTATTTTTAGTACCAACTGTAGCTCTGGTCACAGAAGTATGT
AGTCCCTGTAAAGTAGTGCAGTACTGGTATGTCATACTCTGTTGTACCTG
ATACTATTTTTAGTACCAACTGTCTGTGTAGCTTTAGTGCACAAAAATGC
AGACCATCCTCCTCCATCAGACAGTTAATTGAGAACGGCGTTCTACGTTC
AAGGGAGATGGATGTGCAGCCTTTGGGATTGGAGTCGATTGTCGAACATA
GCGTCTTGGTTGAGGTTGAGGTTGTTTCTGTCCACGCTCCGATAAATTGC
CCTTGGTAGGCAAAATAATATAAATACTGTAAGCTCTCGAGTAGCGTCAA
ATTCGAAGTGCCAGGCATGAAATGACAGCGCCGCTGATCGATTTCCTATA
ATTCCGTCTTGAACGTGGTCTGCATTCTCCGCGCGTGCAGACTACGGATT
GTTGACTCTAGGCCTGGTGTTCCTGGTATCGGGAGTGGTCGCTTCCTGCC
TCCTTCCCTTCCTTTATACGAGATTTGTAAGGAAATCCATGAAGGATCGC
ATCGAAGAAAGGTAAGCATCATCTACAACGGTATCTCTCATTACGTTTTG
AAGCCCACGAAAAAAAATCGAGCTCTATCCTGTACGAATAATGTAGCGTA
ACACAAGAAGGGTCCAAATTCAATTACCTGGTATGGCGATACATTAAAAC
GGTGGGTCTCTCTATACCGGTCGCCCCGGTAGCTCAGAGGTACCTCCTAA
CCCTCTGACACGTTGGGACGTGAGTTCGATCCCGGCAAACGGAATTTTCT
CACTAAAAAAATAAAAAAACAAAAATAAAAATGCCCAACGGGTGAAGAAC
GATTAAATCGTTAGTACACAAAATTCGACTTCAAGGTCGACGAGGGAAAG
GAATGGCTGAATCCTTCTCGCGAGAAAAATTAAGGCACGCACCGCAGAAA
GAAGGTGGAAGAGAAATCCTGTGTGACCTTCCTCCTGTGTGACCCCGGCT
GGTACGTCCAACGAACTTGATGTCCAGAATGAATGGGAAGAAAACACAAA
AAAACTCCCCGACATTATACCAATTATAATATTGTAACATCTCTTGTGTC
CTAGACTTTTAAGCCTTTCATGTATAAGGGGCGATGGCACTGTTGCATGG
TTACACATATAGCAAGAGTATGGATCAACCGGGTAAGGTTGCAAATCCTG
CACGTGGTCAGCCGAACAGGGAAAATGAATATTTCCCTGTCCGCGTTCGC
GCCTGAGAATTTGGTCACGCGAGACGGGTTCGACAGTCCCGTCTCGCGTT
AGTCTGCGCATCTCCATACTCAGGCTGAATCTGGTGTTAACGTACCGGAT
TCCTCCCGAGTTCCGCGGAGATGTCCATTTATTTATTTAAACCCGCCATA
CGCCATCGGGTCATTCCCGAGTTTATCGGGTCACGCATTTGCGTATCGAT
AACGTTCACTGTCGCGAGTCCGCCGGCACAGGGCTAGTAAACCTCAAGGG
AATTACGAACGAGTGCTGCCTTGGCAGGTCACCATGGACCAATTAATATG
CGCCCCTCTTTCCCACGCCCAATGAAGTGGGCATGTTGAAAGTATAAAGG
TCGATGGCACTATTACTGTATATTATTATAAACCTATTTAATGATGTACT
AAAATGTTTTGGTTTAGTTTTTTGTCTGCTGTCCCTGCATGGCGATTTAT
GTACTTGTACAGCATAACAGTGGGTTTCTCCCCGGTATTTTACTGTTGAC
CCAATGTTACCACCATCGGGGAGCCCATTTAAATGTCATGAAGATGTTTT
GTATCTGCAGCCCTCGTCGTTCGAGTGGTCTAGTAGGTAACCGGCATACC
TGGTAGTGCGGAAGTCGTGAGTTCGATTCTTACCAAAGTAGGATTTGTGT
CCTTTCTTTCGTTACGGAAATCGTGGGAACGTGAGTAGATAAAATTCAAC
CATTGGTTGACGAGTTGCAAGAGGGCTGAACTTGCATCGCGATAAAAAAT
TGTAAGGCGTGCGCCGGGGAGAGATGGGAAGATCTTTAATGTTCACAGGC
AGGAAGGGAATGACGAGGTCCATCGGCTATAAGGGAGATTAAAGAAAAAA
GCTTATGATCCCACCTAAACGTTTTGACATTTTTCCCCCTGACTGGGGGA
TGCTCAGAGGGGCTAGTTGCGTTCAGATTGTTCTAAACTTAATTATGGAC
TACTCTGTAGTACTATAAAGGACGTTGGTCGTGGGTTGTTGTTTATAAAA
AAAATCCAAAACGCACCTAAACCGTTCTGACCTCTATCCAGTACCCTTCT
CTTTCTTACTCTTTAAGGCAAAGAAACGAATTTCCGTGGTCACAAGCTAC
CCCAAAGTAAGGTACAAAAAAATAAAGATAAAATAAAAAAGGACCCAGAG
AAAGTCCCAACACTTGCGAGAAAAATATTATACGGGTTCCTAAAAATACA
GCGCCCGCCGTTCTGTCTCAACGCCAGGAGCAGGAGCTGCTGCTGCAGAG
GCTGTGCGCTGTGCGGTCCAGAATTCAAAATTATGGGTTTGTATAATAGG
TTCTGTAAGCGTTTTTTTGCCGCTGTGGTTATTCGCCTGACTGCGCAGTC
AGATTCACGGGCGCACCCTAAAAATAACAGGTTCAGAAAAACAAGGTCTA
GGTGCGTTCTGATTCTTCTTTTACAATCCGAGTCGATCGAGGCTGCTCTT
GATGATCCGTTTTGATATTGATCGGTGCCATTACGTGTGGAGTCGCATAA
TTTTTTGTCGCGATTTGGATCCCTGTTGGTCTGAGTAGCGGGTTTTCGCC
ATGATGTGACCCGCTGACCTTGGCACCTCTTTGCGACCACAAGCGGGATC
TATGGCCGACCTGTTTAAAGAAAAATCAGAACGCACCTAGACCTTCTGAG
CATCCCCCAGTTAGGGGGGAAAAAGTGTCAAAACGTTTAGGTTGGATCAA
AGGCTGCAAATACAAAACCTGTTCATGGCATTTAAACGGGTTCCCCGATG
GAAATAACATTGGGTCGACAGTATGTATGTATGTATGTATGTATGGTCAT
CACATATAGCAGAGTATGGATCAATCGGGTAAGGTTGCCAATCCTGCTCG
TGGTCAGCTGAACAGGGAAAATGAACATTCCCCTGTCCCCGTGCGTGCCT
GAGAATTTGGTCTCGCGAGACGGGTTCAGCCGTCCCGTCCCGCGTCAGCC
TGCTCATCTCCATACTCAGGCTGAATCTGGTGCTTACTTACGGGATTCCT
CCCGAGTTCCGCGGCGGCGTCCATTATGAAACCGCCATACGCCATCGGGT
CAGTCCCGAGTTTATCGGGTCACGCAATTGCGTACCGATGGCGTTCACTG
CCGAGAGTCCGCCGGCACAGGGCCAGTAAAGCTCAAGGTAGTTCCAAACG
GGTGCTGCCTTGGCAGATCACCATGGACCAATTAATATTCGCCCCTCTTT
CCCACACCCACTATTGGTATGAAGTGGGCATGTTGAAAGTACCGTATAAT
GTCGGGGAGAAGCCCACCGTTATACTGTACACTTGATCAGAGGTTCTCTA
TCCAGTACCTTCTCTTTCTTTAAACAAAGCTCAGAAGGTCTAGGTGCGTT
CTGATTTTTTACTGCGGTCCAGTAGCCTCCTCGAACAACTTGGGTGCCTT
TTGATTGATTGATTGATTGATTTGCACAAGGTAGAAAAACACCACTGTTG
TTGTTGTTGTTGTTGTCTTCACATTAAAAACCGTTCTGACCTCTATCCAG
TACCCTTCTCTTTCTTACTCTTCAAGGCAAAGAAACGAATTTCCGTTGTC
ACAAGCTAACCCAAAATAAGGTACAGAAAAATAAAATAAAATAAAAAAGA
CCCAGAGAAAGTCCAACACTTGCGAAAAACATATGATACAGGTTCCTAAA
AATAACAGGTTCAGAAAAACAAGAAGCAGGTTAGGGTAGGAAAAACCCCA
AAAAAGGAAGTAGAGCCCATCGCTCCAAACTCGGAAGCTGAGTCACAAAC
AAAATATACTACGTATATAGGAATACCAATACAGGTAAAAAATAAAATAA
ACGAAGAGGAAGCTATCCCCCCCCCTACGAAGCCGGGGAGTGTTCATCGT
CGGGTTCCCGCCGACCAGGCCATCCCCCCTCAACACCTAGGAGCTGTGAG
AGGGCAAAAAAATAAAATAATAATAATACCACGCACGTCATGCAAGATAG
TACCCTATGTCCTAGACAGTATCTCCACGCGCCCCTATGCCGGGGAGCTC
TTTGTCGGGTTTCTCACCAACCAAGCAAATACGGGAAAAAAAAAACGGAA
GGAAAAAACGTACGACGTGCTCTCTATACAACCGGTCGCCCCGGTAGCTC
AGAAGTAACCTCGAAACCTTCTGACACGTTGAGGCGTGAGTTCGAATCTC
GGTAAACGGGATTTTTTTTTCACTAAAAAATAAAAAATACACAAAAATAA
AAATACCCATCAAGTACACAAAATTCGACTTCATGGTCGACGAGGGAAAG
GAATGGCTGAATCCTTCTCGCGAGAAAAATTAAGGCACGCACCGCAGAAG
GAAGGTGGATGAGAAATTATGTGTGACCTTCCTCCTGTGTGACCCCGGCT
GGTACGTCCAACGAACTTGTTGTCCAGAATAAATGGGAAGAAAACACACA
CACACACTCTCCATACAAAGAGAAAAGGCAATATCGAAGGACGATTGAAC
AAAGGGCCGCGGCTTCAACGAGAGCATCAAGACAAAAACGAAGCAAAACA
AAAACAAAGATAACACCAGAGAAAGACGTCATGGCATCTGCAAACCAAAC
GCCTGGAGGATACAAGTTCGCGCCACTCATGGCTAGTCAACGAGGGCGAT
CGAACCAGCACGAGCCCGTTTGCTTTGGGCTATCCTCTTTTTGGTCCTTC
CCGTCACGTTCGGGCATACGGCTGAATGCCGTAGTCCAGCCCTGGCTTCC
TCTGCAGCGATCCAATTCACCATGAAATGTTCCGCCGTTCTGCGCCATTC
GCCCTCGTCCTGGGCTGCAGTTGTCCACTGGTCGGCGTTGATGCCGAAAG
CTCTGAGGTCGTCCAGGAAGTACCCCATCCACTTTTTTTCGTGGCCCCCC
ACACAGCCCGCGTCCCCCACCAATTCTCCGAACATTACGCACTTCGGAAG
TGTCATATCCTCCATGCGCGCCACAAATCCCTCAAACAAGATCCGCCCCC
TGCGTAAGGTCGCCTCGATGCTCTCACTTTTGCAGGCGTTTGATTAACAG
CTATTAATAGAGCTCTAGGCTCTCTCAATTGTCTGTACCACATACTTGAC
GCAAGTGTCTTGTTAAGCTATTATAATGACTGATCAGACCACTGTTTAAA
GAAAAAATCAGAACGCACCTAGACCTTCTGAGCATCCCCCAGTCAGGGGG
GGGGGAAATGTCAAAACGTTTAGGTGGGATCAAAGGCTGCAAATAAAAAC
CTCTTCATGGCATTTAAACGGGTTCCCCGATGGAAATAACATTGGGTCAA
CAGTATAATGTCGGGGAGAAGCCCACCGTTGTAGTGTACACTTCCATTAA
TCGCCATGCAGGGACACCAGAAAAACAGTAAAAACAAAACAGACAATGTA
GTACACCATCAAACATGGTAGTAATAATATACTATTACATAGGCTGTAAA
TACAAAGCCACTACATTGTATTTAACCAGGTTCCCCTATGGTAGTAACCT
TGGGTCAACAGTATAATGTCGAGGAGAAACCCACCGTTATACTGTATTCT
TATATTAATCACCATGCACAGCCACCAATCATAACCCAACATAACCACTG
TAGTACATTGTCAGAGGATAGTACTAATGTCATCGAACCATACAATATTA
GGGGCTTGGGTAAACAGTAAAATGTAGGGGAGAAATCCACTTTTAATAGT
ATACTGTACAATACCATTAATCACCATGCAAGGATATCACCCAAACACAG
AAGATACGGGAAGCTTGGTTTACAACTTAGTTTAGAAAAAATCTGAACGC
ATCTAAACCTTCTGAGCATCCACCTCAAGTGGAAGAGTGTCTGTTACATT
ACATCTATGATCGGATGGGTGTCACTAAAGGGGATTTACAGGTATAGATG
TAGACGTCATCCTGGAAAATTGTACAATAACTTTTGTTTTACGTATTTAA
CGAAAGATCAGCACCCGCCTAGTAATTTAGTAGTATATAGTACAGTACAG
TGTAGTACCATAGAAATAATGATGTGATATCATAAGTAGTACATATCAAA
ACACGCCTAGACCTTCTGGGCATAAAAACGTTTATGTGGGATCAAAGGCT
GCAAATACAGAACTTCTTCGTGGCATTTAAACGGGTTCCCCGATGGAGAT
AACATTGGGCCAACAGTATAATGTCAGGGAGAAGCCCACCGTTATATTGT
ATACTTACATTAATCGCTATGCAGGGACACTAGAAAGAGTAAAAACAAAA
ACAAAAACAATGTAGTACATCATCAAATATGGTAGTACAGTAATGATATA
CTATTACGTAGACTGTAAATTGTTGTGGCACCTGGATCAACCGCGTATCG
CGTATCTCTGGTAATAGTCGATACGGGAGAGTTTCAGCATTGCTGTTGAA
TAGTCAAAAGTTGGCCGTTTTCCCAGAGGCAGAAATGTTTGCTCCAATTT
TGAAATTTTGCTTCAAATTCTTGAAAAGTTGGAAATGCTGTTTTCCATAC
GACGTATGAGAACTACTGTAGTAGAAGTCTGACTCCCAAGTCTTCGCTTC
CGTGGTCCAAATGCTGACTTCGCTTCCGTGGTCCAAATGCTGACTTCGCT
TCCGTGGTCCAAATGCTGACTTCGCTCTCTCGCCCTTTGGTCGAATAACA
TAATGAACATACCGTAATGAATAGTCTACTAATGCTGACATCTGAACATA
CCGTAATATGTTCATTATATGCATTCATACAGTAATGTGGATGTACGCGT
GTAATTATTAATTGCACATAATCGCCCAATCAACCCCTCTCGTGAATACA
TATATATATATAATAATAATATTATAATAACAATAATAATAATAATAATA
ATATGATCAATCGAACTATTAATACTGCTCTACGCGTACTTATCTCCTCG
AAGTATGTGTGTGTGTTTTTATTTTCTTACTCCGCATGACTAGCTTATTC
TGTCACTGTTTATAGTGCTACTGGGCGAGTCTATGCTATAATTCTATAAA
TACTGTACTCACAGCGTTGGTTCTCCCAAGGGGAGATCGAAGATACTTGT
TATGTATAGTCACACGTAGCGCAAGAGTATGGATCAACCGGGTAAGGTTG
CCGATCCTGCACGTGGTCAGCTGATCGGGGAAAATGAATGTTTCCCTGTC
CCCGTTTGCGCCTGAGAATTTGGTCTCGCGAGACGGGTTCGGCAGTCCCG
CCCCGCGTCAGTCTGCTCATCTCCATACTCAGGCTGAAACTGGGTGCTTA
CTAACGGGATTCTTCCCGAGTTCCGCGGCGGCGTCCATTTATTTATTTAA
ACCCGCGATACCCCTTCGTGTCAGTTCCGAGTTTATCGGGTCACGCAATT
GCGTACCAATGGCGTTCACTGCCGAGAGTCCGCCGGCACAGGGCCAGTAA
ACCTCAAGGTAGTTCCGAACGAGTGCTGCCTTGGCAGGTCACGATGGACC
AAATAATATACGCCTCTCTTTCCCACTCCCACTATTCGTATGAAGTGGTT
ATATTAATAGCATGTTGAAAGTACCGGCGACATATGAAAACATCTAATCT
GATGAGGCGCGACAAAGGGGACATGACCTACTCTATCTATACTATCTACA
GTGTGAACTTATAAAATCGCACATATACAACCGCACGTCTCACTTCGACT
ATCTTTGTATTTTGGGGGGGATGTAGGGAGACGAGACAAGCGCCTTTCTA
CAGTTAGCAGTTACAGCCCATGTCCCGCAGACCATCAAACCTTGGTGTTT
TCTACGTTGAACCACAGGGATTGATTGTCGTTATCCGTTTCTACGTCGAA
CCACAGGGATTGAAAACACTCGTTGATCTATAATTCCTCTATTGAACCCG
ACTTGTCGCAATGATGGCGTTATGCAACGGAAGAGGAGAGATTAAGATCA
TTCTCGACCTTGAGCCTGTACGTATCGCACGGTTGAGCAATGAGCGATGG
TACGGTACTGAAATAAATGAGAGGGCCTTAGCATCCATCGATCACTGCCC
AGGACCGGACAGAGAGCACGTGTCAAGAGGGGATGCGTTTGACGAAGGAC
ATGCATCACGCCGAGGAGAGGGGAGAAGATAACCCACCCACCCTTCCTTC
TTTCGGTCTTGTCTCTTTTCTTTCTTTTCTTTGTAAGGCAGCAAAGAACG
CGCTGCTCCCCGCATAGCATAGGGCAAAAAAATACGAACCGTCGAGACCG
CGTTGACGGGTACGCATGGGCATATCCTAGTCCCTTCAAGCTTTTCTGGT
TCCATTAATGCCCCGGGTATAGTTGGACACGCCATTAACGATCTATGAAA
AACCATCAGCCCTATACACGTCTATAGCAGGGACCTAGCGGGGAACGCAC
AGTGGCTAGTCGATTGCTCAAGCGGTGTGGTCAGGATAAGTGCCATGTTC
TGGTAATTCCTTCAATACGTGTTGTTTTTCGGGGTCTACAATTGGTCCAT
TTCGCACGCGTACACTTGTAAAGCTGCATCCCCTACCCTACCCTTGTTTC
TTGGCTCACGCGACCGTGAATTTTCGTCGCGCCCTGCCCTGCTGATCCTG
CTGAACGTTTTCTCAGGCTGAAATTTGGCCGTCGGTCGCACATTGAAGGG
AACCTTCTCATGGTGCTCGTTAGCGTGATGGCCGTGGCTTGTGCATCGGG
GGTGATCTGGGGGTTCCAAAGGGCGGACTCTGTTTTGACCAAAGTTGCGG
GAGGAACTCAAGGAATGACCTCAGACGTTGTAGCGGTGAGACGGATAACA
GAGAGGGATGGAGCTTTATGGGTGCCATCGCTAGACACGATGAGAGCTCG
ATCATGAACAGCCGTAAGCAGGGCAGATACGTAGCAATCACGTTCACTTC
GTCGATAGCCTGTAGGGACCGATCAATAGCTTACTCGTTCATGTAGACAT
TTCTGTCCGGTGCAGAGCCCCGAAAAATCGGTTTTTATCGCCGCGATCAC
CTCACGCGCGCTTATTATGGCGTCATAAGTCGCGCTTCTGTGGCCTATAA
CACAAATCGAAGCCAACGGTTCCCGTCGACAGTACAACGCAGAGGGCTCC
TTCTCAGATGTAGCCCGACTAATCCCCCACCAGTCTCAGCGAATCCTAGT
CTTCATACTTATCGACGGTGTGTGGCTCAACGTCCTATCCGCCGCCGTTT
GAAATGTCCCACCCGCCGTGAAAGGTGCTGACCTTGCCCACCGACACGGC
AGACGCTCTAGACGGCGTATCCACATCGTATGATGCCCTGGCGGACGGCG
TCGAAAACTGTACCAGAAACGCTGTAGAGGGACTTGGCATAGAAATCCCT
TTCTCCGATGTGCTGGACGAGATCTTCGATCAATTGAGCACAACCTCGGA
TGTGGTGGGCTCCCTCGTAGATGATGTGCAGGACGAAGTGGACGATCTCA
ACGAGGATGTGTTGAATCAGCTAGTGGATGATGTGAGTCACAGAGGGAGC
TATCTTATCCCGCCGCGAGAGCAGAGAGAAGCCAATCAGCGCCAATCGGG
CCGTTCGTTGCGGGAGTTTTGGTTAAAGCTCTATTACCCCTGCTCTTCGC
CCCCCCCCCCTTGACTTGTTGTCTGACTTACCAACTCGGTGACGTTGCGA
GCCAGGTGCAAGGCGTAACGGACGCCATCGATACCACGGAGGGAATCCGG
AAGGGATTGGTGTGGCCAATTATATCGCTTAGCATTCTCATGATCGTCAT
CTTCGTCGCGATCGCGCTTGGGACCTATGAATTCGTCGCGTGGGGCATCA
AAGACTGCGGTTGCATCAGCTGCTTCGTTTTCCCGTGCGCCATTTTTATC
GTGGTTATTATCTGGCTCATAACCGTGGCGGCTGTGTCCTTGAGCGGTGA
GACTCGAGCCCTCCGCTCCCAGACCTGTGGCTCTTTTGCTCCTCTCGTCG
CGCGTTAACCGTGACGGCGCTTGAAAATCACGCGATCTGTCTGGATGCGT
CTTGGAAAGAGCCGTTCGTTCGCTTCGGCGTCGAGCTTTCGGCTGCTCGA
GATGGATTGGAGACCGCGACTCTCATTATTTAAGTAAACGTCGTGTGGTG
TCGAATACCGCTGTCACCACCAGCACCTAATCTTATACATGATGGACTTC
AATGCCCTCCGTGCATTTGTCCTTTACCGCCCGCAGCTCTTTCGGGAGAC
TTCTGCATTGACCCGGATCCCAGCGCACAGACCGTTGTTTTAAATAATTC
GGAGGAAGGTTTGAATTCCACCGAAGAAGAGCTCCTCGCTGAGATCGTAA
TCTACTACACCGGCGGCTGCAACACGAGTAACTCAATACTTGACTTGTTA
ACCATCTCCCAGGAAGTAGCTGTACCGCTAATCCAAGGGATTATGGTCAC
CTCCACCGAGGTGGGTACGCTCTTCCTTCACCTCCAAACTGCAGCGCGGT
CGTCGGTTGTTTAGCTCGTGTCGTTTGGGTTCCAAAGCGTCGATGCAATG
AACGCTCCAGGACCGGAATACACAAAGTGATCCATCCCCGCCGCCAGTGA
AATGAGCGTCGTACGATAACGCTCGGTGTGACTTCATTCCATGTCACGAT
TTAGCATTGCCCAATGTCATCTTTTGTCGTTTTTTCCATCTCTTCGTCGC
CGTTCTCTTGCTTCGCACGCGGCCCTAAAGATCTCCGACCAGTTGATGTC
CGTCGAATGCGATGTATCATCATTCGTGAACGAGCTCAACCAGACTCTGT
GGGACTTTTGGGTCATTCTAGAGAACGCTGCGAACCTAACGTCTTGCGAG
AACTTCAACGGCCAGTACCAGAGCGTGGTGTACGACGAATTCTGCGACAA
TCTCCCTAGGGCATTGTTGGGCTTTTGGGTGTCGGGCGTCATTTTAACCG
TGCTGCTTCTCATGCTGGTGAGACTTTCCCTATTTGTCGCGCGGTAGGCG
CTCTTTTCCCCTCGCACCCCGTCGATGAGTTACACGCGCCCGCGGAGTCA
ACCCCTTCGAGATCAATAGCACCAGCGACGCGTGGGGGAAGATAACTCGA
CGGTCAACCTGATGGAGGTCTTTCATAGCAAACTGAGGTGTACTCGATAC
GACCCCGACACTGTTCAAATCGATCAATGAATTCCCTCCTTCTCTTCGAT
CCGGATTTTCACGCCGCAGGCGGCCCTGTGGAACAGAATGCTGCGGCAAA
AAAGAGCGGACGATGAGGCGGATGGCATAGAGGCGCGCTCAAGCTGGTCG
CTTAGTGGAATGATGAAGTCGTCCCGATGGTCACGCGGCAACGCCAAGGA
ACCCGCCGAGCACACGAATGTCACTCGCCCGGTGGAGTATGCCACTCCTC
AAGACACGTCGCGTTGGAGTTAATGAGGAATGAAGCAGAAGCGCGCGAAT
GTCTCGTCGAAACAAAGCTCACTCGAGGTGTGTCGTCCCGGAATAAGTGC
CTAGCCAAACGAGTGCCGCACGGAGCAAGGCGGGACGAGACGGGAGCGGG
GGATGGATCAAGGTGGGGACGGGAGGTCGCGAGGACGGCGCTCGCGGAGA
ACATGAGTAGCTTGTAGAGCGTGTGTATTTACGATTAATGGCGACCAGTT
TCTTGTGCATTTTCGCGTGGTTACCCCGTAGGTAGGATAAGGGGCCGATC
CCTGCTTGTTGCAAGTGGGGTTTTCTCCTGTCCAGTTTTATGTTTTATCC
TACCTTAAGTTCGAGTGGTTTCTTAGTTTACCTTGTTCTTTTAGAACCAG
TACAGTAGTGTAACTTAGTTTTTGTCCTTTTGGGCCCATTTGTTTCGACT
ATAAATATAGCTCTATGGCAAGTTAAAAGTTGTTACATGTTAAGATATAT
CCTTCGGTTGTTTGCCTGCTTGTTCGTTGGTGCATGCATGTATGGCAGCA
CTTACGGTTCAAAACTTTTTGGGGGCGACAACAGTGGAGGCAAAACGCTG
ATGGTACTATACTTTCCTACCGTAGGTTAGTGAACCATATTTTCTACGTG
TTTTGGCATCCCATCCCTAGAGCTCCCCTGAAGCCGATTGCATTTTTTTT
TAAATTTTGTGTTGTGACAAAATGTACTGTTGATAGTGTTATCGTTTGTC
GCCCCCGCTTCCCGGTTTCTTTATCTTGCATGTATGAATACCACGCATAC
CTAGCTCTGCATGTTTGGGGAGGGTGCGGCGAGTCTATCGATTTCATGTT
TGTTACAAAATCTGATTTATCTATCGTCGCGTAGAGACCATCGGAGCCAA
AAACATTTAGAGCTACAGTACAGCAGGAAACGTGTTCTTGGAATTCTCAT
GTGGTGGCACGACACTTTGCAGTCACGGATAAAATGTCGAAGAGATATTA
TTACGATTGCCGATCGACTGAGCGCTGGGACGCAAAGTACGAAAGACTCG
CAACGGTTGCAATCCTTCAATTTCACGGAGAACTTCAAGCGCCAACTGGG
GGCGCGCCTCGACGAGGAAACTTGAATTCTCTCGGGCGTCGTCCCCGCGA
AAGTTCAGGACTCATGTTGAAGTAAGGGTACTATGACGGATATAAGATAA
CAAACCGGGAGTACAAGTTCAACGCGTTTGACGGAAGAAGTGGAGTCACT
TACTTAGCTCACTGCTGCCGTCAGACATCAGACGGTAACATGACAAGGAT
AGAGTTACGACTCACCGTAGAAGCGAACCCCTTGTGGAGTTGAGAAAAAC
GGTATAGCACGGGTGAGGACGCGAGACAAGAGCCAGCGACCCAGCTCCCT
AGTGCTCATCTCATCCCATAGGTCGCTCTTCCCCCCCTAGGATTTTCTCC
GGGTGGCGGAGGCAGACCTCCCACCGTAAACGAAGGGCCAACCGTCAGCG
GTGAACCTACCGGAAAGTAGCTATATGCGAGTCCATCGGTTATGACCTAC
GTTAGGTATTTCCGTAACCATCCTACTTTGCGCTATAGTTTAGCCCCCCT
CCAGTCCACTAACCCCCCGCGCTAACCGCGGCATCAACCACCAGTTTGCC
ACCGCTCTTGTAGAGTCGCCTAAAGCTATCCACTGCTACTGCTGTAAGGG
ACAAGTTTGAAGCTCCGCTTACCGAAGGAAGTTTCCTCTAGATTAGCATC
GTGTG back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig1042:18013..32417+ >mRNA_A-nodosum_M_contig1042.4.1 ID=mRNA_A-nodosum_M_contig1042.4.1|Name=mRNA_A-nodosum_M_contig1042.4.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1614bp|location=Sequence derived from alignment at A-nodosum_M_contig1042:18013..32417+ (Ascophyllum nodosum dioecious)
ATGTCCTCCGACAATAATAACAACTGGTGGCAAAATATATCGGCCTATCA
GAGCGATTATGAACCACGTTCGTATAACCCAACCTCCGAGGTGGTGGCCG
ACCACAATCTGCTGGAGGGGCTGAGAGAAAATGAGTTCGACACCAAAGAT
TCGTCATACAACTACGGATTGTTGACTCTAGGCCTGGTGTTCCTGGTATC
GGGAGTGGTCGCTTCCTGCCTCCTTCCCTTCCTTTATACGAGATTTGTAA
GGAAATCCATGAAGGATCGCATCGAAGAAAGGCTGAAATTTGGCCGTCGG
TCGCACATTGAAGGGAACCTTCTCATGGTGCTCGTTAGCGTGATGGCCGT
GGCTTGTGCATCGGGGGTGATCTGGGGGTTCCAAAGGGCGGACTCTGTTT
TGACCAAAGTTGCGGGAGGAACTCAAGGAATGACCTCAGACGTTGTAGCG
GTGCTGACCTTGCCCACCGACACGGCAGACGCTCTAGACGGCGTATCCAC
ATCGTATGATGCCCTGGCGGACGGCGTCGAAAACTGTACCAGAAACGCTG
TAGAGGGACTTGGCATAGAAATCCCTTTCTCCGATGTGCTGGACGAGATC
TTCGATCAATTGAGCACAACCTCGGATGTGGTGGGCTCCCTCGTAGATGA
TGTGCAGGACGAAGTGGACGATCTCAACGAGGATGTGTTGAATCAGCTAG
TGGATGATGTGCAAGGCGTAACGGACGCCATCGATACCACGGAGGGAATC
CGGAAGGGATTGGTGTGGCCAATTATATCGCTTAGCATTCTCATGATCGT
CATCTTCGTCGCGATCGCGCTTGGGACCTATGAATTCGTCGCGTGGGGCA
TCAAAGACTGCGGTTGCATCAGCTGCTTCGTTTTCCCGTGCGCCATTTTT
ATCGTGGTTATTATCTGGCTCATAACCGTGGCGGCTGTGTCCTTGAGCGC
TCTTTCGGGAGACTTCTGCATTGACCCGGATCCCAGCGCACAGACCGTTG
TTTTAAATAATTCGGAGGAAGGTTTGAATTCCACCGAAGAAGAGCTCCTC
GCTGAGATCGTAATCTACTACACCGGCGGCTGCAACACGAGTAACTCAAT
ACTTGACTTGTTAACCATCTCCCAGGAAGTAGCTGTACCGCTAATCCAAG
GGATTATGGTCACCTCCACCGAGATCTCCGACCAGTTGATGTCCGTCGAA
TGCGATGTATCATCATTCGTGAACGAGCTCAACCAGACTCTGTGGGACTT
TTGGGTCATTCTAGAGAACGCTGCGAACCTAACGTCTTGCGAGAACTTCA
ACGGCCAGTACCAGAGCGTGGTGTACGACGAATTCTGCGACAATCTCCCT
AGGGCATTGTTGGGCTTTTGGGTGTCGGGCGTCATTTTAACCGTGCTGCT
TCTCATGCTGGCGGCCCTGTGGAACAGAATGCTGCGGCAAAAAAGAGCGG
ACGATGAGGCGGATGGCATAGAGGCGCGCTCAAGCTGGTCGCTTAGTGGA
ATGATGAAGTCGTCCCGATGGTCACGCGGCAACGCCAAGGAACCCGCCGA
GCACACGAATGTCACTCGCCCGGTGGAGTATGCCACTCCTCAAGACACGT
CGCGTTGGAGTTAA back to top
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