prot_A-nodosum_M_contig104.8.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig104.8.1
Unique Nameprot_A-nodosum_M_contig104.8.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length85
Homology
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BLAST of mRNA_A-nodosum_M_contig104.8.1 vs. uniprot
Match: A0A6H5J5Z5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5Z5_9PHAE)

HSP 1 Score: 52.4 bits (124), Expect = 6.340e-6
Identity = 24/61 (39.34%), Postives = 35/61 (57.38%), Query Frame = 0 
Query:    1 FFSVPKGCTSRTFNGTRPADRKRIDYIITRQPHRKLVRNVTVHLQPYADSDHNIVCARVRL 61
            +F  PKG    TF  +    +  +D+I+ RQ +R+ VRNV+V L  + DSDHN+V     L
Sbjct:  128 YFRTPKGGVQHTFQSSNKGKKYHLDFILMRQTNRRFVRNVSVKLVDFKDSDHNLVLTTAML 188
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig104.8.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5J5Z5_9PHAE6.340e-639.34Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10Endonuclease/exonuclease/phosphatasecoord: 2..61
e-value: 9.4E-6
score: 27.2
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 9..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig104contigA-nodosum_M_contig104:154980..155234 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig104.8.1mRNA_A-nodosum_M_contig104.8.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig104 154978..155234 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig104.8.1 ID=prot_A-nodosum_M_contig104.8.1|Name=mRNA_A-nodosum_M_contig104.8.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=85bp
FFSVPKGCTSRTFNGTRPADRKRIDYIITRQPHRKLVRNVTVHLQPYADS
DHNIVCARVRLPGRFARNRKQRAPTGRKSIDRRAI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf