prot_A-nodosum_M_contig104.32.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig104.32.1
Unique Nameprot_A-nodosum_M_contig104.32.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length215
Homology
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BLAST of mRNA_A-nodosum_M_contig104.32.1 vs. uniprot
Match: A0A6H5L7X8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7X8_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 1.810e-18
Identity = 50/86 (58.14%), Postives = 61/86 (70.93%), Query Frame = 0 
Query:   17 QLGLMRNDLDDVRREIASVIERVELVREDLYGERSSARSTFLSIWWCCRRRDLRNLEDRLWIRLHQLQEKENELHRQRTAFLSLSL 102
            +L +MR++L+D       VI +++ VR DL GE SS      S+  CC+RRDLR LEDRLW+RLHQLQEKENELHRQRTA LS  L
Sbjct:    7 ELEMMRDELEDXXXXXXXVIAQIDTVRADLNGEDSSC--GIESMCCCCKRRDLRRLEDRLWLRLHQLQEKENELHRQRTAILSRPL 90
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig104.32.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L7X8_9PHAE1.810e-1858.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 25..45
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 138..170
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..214

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig104contigA-nodosum_M_contig104:372638..376097 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig104.32.1mRNA_A-nodosum_M_contig104.32.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig104 372551..376628 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig104.32.1 ID=prot_A-nodosum_M_contig104.32.1|Name=mRNA_A-nodosum_M_contig104.32.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=215bp
MHPSVDVRVTSQERIRQLGLMRNDLDDVRREIASVIERVELVREDLYGER
SSARSTFLSIWWCCRRRDLRNLEDRLWIRLHQLQEKENELHRQRTAFLSL
SLRSDSRGESPAVVRQPSPVSPEEAPESPPWQQRSLRPERRQPASIASTQ
GREYGRPPNTGSNTINRAVSHAAQVRLPVRVEATRPADVAYQPPSIRRRS
SRPGFAEDTGSGAE*
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