prot_A-nodosum_M_contig1036.33.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1036.33.1
Unique Nameprot_A-nodosum_M_contig1036.33.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length51
Homology
BLAST of mRNA_A-nodosum_M_contig1036.33.1 vs. uniprot
Match: A0A0U1WNP6_SARFS (NADH dehydrogenase subunit 7 n=22 Tax=Fucales TaxID=3009 RepID=A0A0U1WNP6_SARFS)

HSP 1 Score: 99.4 bits (246), Expect = 1.990e-23
Identity = 49/50 (98.00%), Postives = 49/50 (98.00%), Query Frame = 0
Query:    1 GSNRPYRCKIKAPGFSHLQGLNFMAKSHIMLADVVTIIGTQDIVFGEVDR 50
            GSNRPYRCKIKAPGFSHLQGLNFMAKSH MLADVVTIIGTQDIVFGEVDR
Sbjct:  350 GSNRPYRCKIKAPGFSHLQGLNFMAKSH-MLADVVTIIGTQDIVFGEVDR 398          
BLAST of mRNA_A-nodosum_M_contig1036.33.1 vs. uniprot
Match: A0A0V0H7K6_SOLCH (Putative ovule protein n=1 Tax=Solanum chacoense TaxID=4108 RepID=A0A0V0H7K6_SOLCH)

HSP 1 Score: 92.0 bits (227), Expect = 3.850e-23
Identity = 44/50 (88.00%), Postives = 48/50 (96.00%), Query Frame = 0
Query:    1 GSNRPYRCKIKAPGFSHLQGLNFMAKSHIMLADVVTIIGTQDIVFGEVDR 50
            GSNRPYRCKI+APGF+HLQGL+FM+K H MLADVVTIIGTQDIVFGEVDR
Sbjct:   48 GSNRPYRCKIRAPGFAHLQGLDFMSKHH-MLADVVTIIGTQDIVFGEVDR 96          
BLAST of mRNA_A-nodosum_M_contig1036.33.1 vs. uniprot
Match: UPI001894AD3B (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2-like n=1 Tax=Jatropha curcas TaxID=180498 RepID=UPI001894AD3B)

HSP 1 Score: 92.0 bits (227), Expect = 1.280e-22
Identity = 44/50 (88.00%), Postives = 48/50 (96.00%), Query Frame = 0
Query:    1 GSNRPYRCKIKAPGFSHLQGLNFMAKSHIMLADVVTIIGTQDIVFGEVDR 50
            GSNRPYRCKI+APGF+HLQGL+FM+K H MLADVVTIIGTQDIVFGEVDR
Sbjct:   92 GSNRPYRCKIRAPGFAHLQGLDFMSKHH-MLADVVTIIGTQDIVFGEVDR 140          
BLAST of mRNA_A-nodosum_M_contig1036.33.1 vs. uniprot
Match: A0A0H5QRL0_9EUKA (Complex1_49kDa domain-containing protein (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5QRL0_9EUKA)

HSP 1 Score: 91.3 bits (225), Expect = 1.720e-22
Identity = 42/50 (84.00%), Postives = 48/50 (96.00%), Query Frame = 0
Query:    1 GSNRPYRCKIKAPGFSHLQGLNFMAKSHIMLADVVTIIGTQDIVFGEVDR 50
            GSN+PYRCKIKAPGF+HLQGL+FM+K H M+ADVVTIIGTQDIVFGE+DR
Sbjct:   77 GSNKPYRCKIKAPGFAHLQGLDFMSKGH-MIADVVTIIGTQDIVFGEIDR 125          
BLAST of mRNA_A-nodosum_M_contig1036.33.1 vs. uniprot
Match: NDUS2_PYLLI (NADH-ubiquinone oxidoreductase 49 kDa subunit n=72 Tax=Phaeophyceae TaxID=2870 RepID=NDUS2_PYLLI)

HSP 1 Score: 94.4 bits (233), Expect = 1.410e-21
Identity = 47/50 (94.00%), Postives = 48/50 (96.00%), Query Frame = 0
Query:    1 GSNRPYRCKIKAPGFSHLQGLNFMAKSHIMLADVVTIIGTQDIVFGEVDR 50
            GS+RPYRCKIKAPGFSHLQGLNFMA SH MLADVVTIIGTQDIVFGEVDR
Sbjct:  350 GSSRPYRCKIKAPGFSHLQGLNFMACSH-MLADVVTIIGTQDIVFGEVDR 398          
BLAST of mRNA_A-nodosum_M_contig1036.33.1 vs. uniprot
Match: A0A8J4QAP0_9ROSI (Complex1_49kDa domain-containing protein n=1 Tax=Castanea mollissima TaxID=60419 RepID=A0A8J4QAP0_9ROSI)

HSP 1 Score: 89.0 bits (219), Expect = 1.480e-21
Identity = 42/50 (84.00%), Postives = 47/50 (94.00%), Query Frame = 0
Query:    1 GSNRPYRCKIKAPGFSHLQGLNFMAKSHIMLADVVTIIGTQDIVFGEVDR 50
            GS +PYRCKI+APGF+HLQGL+FM+K H MLADVVTIIGTQDIVFGEVDR
Sbjct:   79 GSTKPYRCKIRAPGFAHLQGLDFMSKDH-MLADVVTIIGTQDIVFGEVDR 127          
BLAST of mRNA_A-nodosum_M_contig1036.33.1 vs. uniprot
Match: A0A4D6E538_9PHAE (NADH dehydrogenase subunit 7 n=2 Tax=Laminariaceae TaxID=33636 RepID=A0A4D6E538_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 1.950e-21
Identity = 46/50 (92.00%), Postives = 47/50 (94.00%), Query Frame = 0
Query:    1 GSNRPYRCKIKAPGFSHLQGLNFMAKSHIMLADVVTIIGTQDIVFGEVDR 50
            GSNRPYRCKIKAPGFSHLQ LNFM+ SH MLADVVTIIGTQDIVFGEVDR
Sbjct:  350 GSNRPYRCKIKAPGFSHLQALNFMSNSH-MLADVVTIIGTQDIVFGEVDR 398          
BLAST of mRNA_A-nodosum_M_contig1036.33.1 vs. uniprot
Match: A0A8F0K0U0_9PHAE (NADH dehydrogenase subunit 7 n=1 Tax=Analipus japonicus TaxID=31333 RepID=A0A8F0K0U0_9PHAE)

HSP 1 Score: 93.6 bits (231), Expect = 2.700e-21
Identity = 46/50 (92.00%), Postives = 47/50 (94.00%), Query Frame = 0
Query:    1 GSNRPYRCKIKAPGFSHLQGLNFMAKSHIMLADVVTIIGTQDIVFGEVDR 50
            GS RPYRCKIKAPGF+HLQGLNFM KSH MLADVVTIIGTQDIVFGEVDR
Sbjct:  350 GSPRPYRCKIKAPGFAHLQGLNFMTKSH-MLADVVTIIGTQDIVFGEVDR 398          
BLAST of mRNA_A-nodosum_M_contig1036.33.1 vs. uniprot
Match: A0A1B3IYX9_9LILI (NAD(P)H dehydrogenase subunit H (Fragment) n=2 Tax=Mesangiospermae TaxID=1437183 RepID=A0A1B3IYX9_9LILI)

HSP 1 Score: 92.0 bits (227), Expect = 3.300e-21
Identity = 44/50 (88.00%), Postives = 48/50 (96.00%), Query Frame = 0
Query:    1 GSNRPYRCKIKAPGFSHLQGLNFMAKSHIMLADVVTIIGTQDIVFGEVDR 50
            GSNRPYRCKI+APGF+HLQGL+FM+K H MLADVVTIIGTQDIVFGEVDR
Sbjct:  248 GSNRPYRCKIRAPGFAHLQGLDFMSKHH-MLADVVTIIGTQDIVFGEVDR 296          
BLAST of mRNA_A-nodosum_M_contig1036.33.1 vs. uniprot
Match: UPI001D107ED7 (NADH dehydrogenase subunit 7 n=1 Tax=Polymyxa betae TaxID=41456 RepID=UPI001D107ED7)

HSP 1 Score: 93.2 bits (230), Expect = 3.660e-21
Identity = 43/50 (86.00%), Postives = 48/50 (96.00%), Query Frame = 0
Query:    1 GSNRPYRCKIKAPGFSHLQGLNFMAKSHIMLADVVTIIGTQDIVFGEVDR 50
            GSN+PYRCKIKAPGF+HLQGLNFM+K H M+ADVVTIIGTQDIVFGE+DR
Sbjct:  347 GSNKPYRCKIKAPGFAHLQGLNFMSKGH-MIADVVTIIGTQDIVFGEIDR 395          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1036.33.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0U1WNP6_SARFS1.990e-2398.00NADH dehydrogenase subunit 7 n=22 Tax=Fucales TaxI... [more]
A0A0V0H7K6_SOLCH3.850e-2388.00Putative ovule protein n=1 Tax=Solanum chacoense T... [more]
UPI001894AD3B1.280e-2288.00NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
A0A0H5QRL0_9EUKA1.720e-2284.00Complex1_49kDa domain-containing protein (Fragment... [more]
NDUS2_PYLLI1.410e-2194.00NADH-ubiquinone oxidoreductase 49 kDa subunit n=72... [more]
A0A8J4QAP0_9ROSI1.480e-2184.00Complex1_49kDa domain-containing protein n=1 Tax=C... [more]
A0A4D6E538_9PHAE1.950e-2192.00NADH dehydrogenase subunit 7 n=2 Tax=Laminariaceae... [more]
A0A8F0K0U0_9PHAE2.700e-2192.00NADH dehydrogenase subunit 7 n=1 Tax=Analipus japo... [more]
A0A1B3IYX9_9LILI3.300e-2188.00NAD(P)H dehydrogenase subunit H (Fragment) n=2 Tax... [more]
UPI001D107ED73.660e-2186.00NADH dehydrogenase subunit 7 n=1 Tax=Polymyxa beta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001135NADH-quinone oxidoreductase, subunit DPFAMPF00346Complex1_49kDacoord: 1..50
e-value: 8.6E-16
score: 57.8
IPR029014[NiFe]-hydrogenase, large subunitGENE3D1.10.645.10coord: 1..50
e-value: 2.1E-13
score: 51.8
IPR029014[NiFe]-hydrogenase, large subunitSUPERFAMILY56762HydB/Nqo4-likecoord: 1..50
NoneNo IPR availablePANTHERPTHR11993:SF10NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 2, MITOCHONDRIALcoord: 1..50
IPR022885NAD(P)H-quinone oxidoreductase subunit D/HPANTHERPTHR11993NADH-UBIQUINONE OXIDOREDUCTASE 49 KDA SUBUNITcoord: 1..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1036contigA-nodosum_M_contig1036:112995..113147 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1036.33.1mRNA_A-nodosum_M_contig1036.33.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1036 112995..113147 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1036.33.1 ID=prot_A-nodosum_M_contig1036.33.1|Name=mRNA_A-nodosum_M_contig1036.33.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=51bp
GSNRPYRCKIKAPGFSHLQGLNFMAKSHIMLADVVTIIGTQDIVFGEVDR
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001135NADH_Q_OxRdtase_suD
IPR029014NiFe-Hase_large
IPR022885NDH1_su_D/H