prot_A-nodosum_M_contig1034.3.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1034.3.1
Unique Nameprot_A-nodosum_M_contig1034.3.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length1395
Homology
BLAST of mRNA_A-nodosum_M_contig1034.3.1 vs. uniprot
Match: A0A6H5KJL2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJL2_9PHAE)

HSP 1 Score: 535 bits (1379), Expect = 2.610e-159
Identity = 447/1155 (38.70%), Postives = 548/1155 (47.45%), Query Frame = 0
Query:   24 VCSTGLTSMEKDDLKDKVTAMGGSFHGNLTVDTTHLAAACSDTEKYRVATTMKDVVVVRPSWVSDSCQQGRKLPCEEYAIPPFEGLRITVTGLPIDRKERLREMIESGGGGYMGAMEMNATTHLVAEAATGAKYEAATSPEWRGTVKIVRSQWVEECFARR---------------------------------------LRLPEETFPVSTGEDDHTEDDCDEDHEGEERYHESKEEKVVAAQADRTGEHPGRRQRHSSSRNIGSVEATTPSTASSAANASRGGSLYPWGSTGTKADDGETAGDGKVEGVPTRKEALALPDGDYLSGCRLMLIGFAAEALLPLSLLVRKGCGVRYASPNEEITHVIVGDRSLANPKLVSALEAHPCSPALVTALWLQESCRAGRMLATEGYLCPRPSDGGRFGTRGRSGDGXXXXXXXXXXXXXXXAV--------RRFGVGPNRSLGG------TIAAHAGHPGDPPTKSKAXXXXXXXXXXX--KMKDAGSNV-----------------SGGENAAGSGHRRREV---GHHIEAQEGHAVG--------GGMVRVSMTSKPA--GWAEVAKKELERGRFIAHARMGKSRPKLEAPGSTN-----------------------------------------------------VDDGGCRDGG----------------------SVRESSNKHQRAAEDRDFAGCRGGNDSSRRRKWQFFRKHVFVVHGTGLTDEEEQRAAGLVVKYGGRCLDPDDTRSAPAL-RRTLLSAGVELTAASA-------------------------VTDRKLESDELAAETRAS----RADLPDTA------RC------FVVGKHGSCPLVSTWRDDGGGGIEDSRSGDLRACEGSQSLSTSQGKPGDGGGADRLAPDKSGIERERRDASDVRARQADGETYGVKSMSLPETRGSQQLSADARPILESEARAEIVTLFWLEACNRLGDFRQPRKCEEVFRPQPWPITPFPEVHEGPTEGRVNGARAGPGSV---GVWA-SRRFAVAVTGFVGAERTGWEQLIECMGAEMCKSLKKRGTTHLVCKE----------------AKGDKYKTALKWGVHVVTADWLLRCARQGYQAGSESLYHP 956
            +C   L    ++DL++KV AMGGSF  NLT+ TTHL AA  DTEKYRVAT MK VVVVRP WV++SC++GRKLPCE +++PPFEGLRIT+TGL +DRK  LR MIESGGG YMGAME   TTHLVAE ATG KYEAA SPEW G++K+V S+W+++  AR                                        +RLPEE FPV+   D              E+               R G H    Q     R         P+  SS A AS   S YPW + G   +D   AG G+ EGVPT++EALALPDGDYLSGCR+M++GF AEA+LPLSLLVRKGCG+RY SPNEE+THV++GDR+LA P+L+SALE+HPC+P +V ALWL E+CRAGRML T+GYL   P+   R      SG  XXXXXXX  XXXXXX          RRFGVG NRS+G                 DPP K   XXXXXXXXX    +M    S+V                  G + AAGS H R  V   G    A++G   G        GG    +  S  A  G A V  +EL            K+ P   A G  +                                                     VD G C  GG                      +VR SS+ ++R          R  + SS       FR  VFV+HGTGL  EEE R AGLV ++GGRCLDP    S+P+L R++LLSAGVELT+A++                         V DR + S   +A +  S        P +       RC       +VG HG CP  +                 L AC               GGG      D  G                DGET  +                  R +LE+EA AE V+  W+EAC+R  + R+P  CE  FRPQPWPI  F +V  G +     G            V A  R  A+AVTGFVG ER GWE LI+ MGA MCK+LKKR TTHLV  +                AKG+K++ A++WGV VVTA WLLRCA  G++ G E  + P
Sbjct:   14 LCVNLLLGETQEDLREKVNAMGGSFDVNLTMSTTHLLAASLDTEKYRVATGMKGVVVVRPDWVTESCREGRKLPCERHSLPPFEGLRITITGLSLDRKAELRAMIESGGGEYMGAMEARNTTHLVAEEATGMKYEAAISPEWNGSIKVVHSRWLQQSHARNQARSPAWKPAPIVDIHPAERSDRPFCIVFPPLLLALSLPVRLPEEQFPVAPHHD--------------EKQXXXXXXXXXXXXGKREGAHEAPTQDSGKGRQXXXXXXGGPAEPSSTAAAS---SRYPW-ANGEGDNDAAAAG-GRPEGVPTKEEALALPDGDYLSGCRVMIVGFPAEAVLPLSLLVRKGCGIRYTSPNEELTHVVLGDRTLAKPELISALESHPCTPPVVHALWLLETCRAGRMLPTDGYLNQPPAVRERNRVAAGSGGXXXXXXXXDRXXXXXXXXXXXXXSIGRRFGVGANRSIGSGXXXXXXXXXXXXXXXDPPKKXXXXXXXXXXXXKETARMGHGSSDVFGNGGDVSCGDGLQGLTKGAKGAAGSLHDRSVVSGTGVSAGAEDGGQAGIRNAPFRAGGATPTASGSSAAAGGVAAVPVQELAPASEAITTSAAKAAPAPSARGEISTIVPEPSGPGFPKRRKAXXXXXXXXXLDEDGARPAPRGCRTPKRQRTRTVGGPVDSGKCSAGGGSTSGNSGRISTSGXXXXXXXXAVRRSSSGNRRXXXXXXXRSKRRQSLSS------MFRGRVFVLHGTGLEKEEEVRMAGLVARHGGRCLDP--CASSPSLLRQSLLSAGVELTSAASPAAAPLLAPHCQEEHVQASGDGGGSVEDRVVVSSSASARSSTSPIGGSGSFPGSGSTEGHERCAAAAGVLIVGAHGRCPWEA-----------------LAAC---------------GGGVQNGGDDSGG----------------DGETVAMPG--------------GLRALLETEAGAEAVSTLWVEACHRGSELRRPGLCERAFRPQPWPIRTFSDVSCGSSFSSSPGTXXXXXXXXRKNVTARDRPPAIAVTGFVGTERAGWELLIQRMGATMCKNLKKRVTTHLVTIDSVLDNLADGYPRVGDVAKGEKFERAIQWGVPVVTAGWLLRCAEHGFEPGLEGSFAP 1079          
BLAST of mRNA_A-nodosum_M_contig1034.3.1 vs. uniprot
Match: D7G795_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G795_ECTSI)

HSP 1 Score: 509 bits (1312), Expect = 6.970e-152
Identity = 420/1062 (39.55%), Postives = 515/1062 (48.49%), Query Frame = 0
Query:   33 EKDDLKDKVTAMGGSFHGNLTVDTTHLAAACSDTEKYRVATTMKDVVVVRPSWVSDSCQQGRKLPCEEYAIPPFEGLRITVTGLPIDRKERLREMIESGGGGYMGAMEMNATTHLVAEAATGAKYEAATSPEWRGTVKIVRSQWVEECFARRLRLPEETFPVSTGEDDHTEDDCDEDHEGEERYHESKEEKVVAAQADRTGEHPGRRQRHSSSRNIGSVEATTPSTASSAANASRGGSLYPWGSTGTKADDGETAGDGKVEGVPTRKEALALPDGDYLSGCRLMLIGFAAEALLPLSLLVRKGCGVRYASPNEEITHVIVGDRSLANPKLVSALEAHPCSPALVTALWLQESCRAGRMLATEGYLCPRPSDGGRFGTRGRSGDGXXXXXXXXXXXXXXXAV-----------RRFGVGPNRSLGGTIAAHAGHPG------DPPTKSKAXXXXXXXXXXXKMKDA--GSNV--SGGENAAGSGHRRREVG--------HHIEAQEGHAVG-----GGMVRVSMTSKPAG------WAEVA--------------------------------------------------KKELERGRFIAHARMGKSRPKLEAPGSTN----------VDDGGCRDGGSVRESSNKHQRAAEDRDFAGCRGG--------------NDSSRRRKWQ----FFRKHVFVVHGTGLTDEEEQRAAGLVVKYGGRCLDPDDTRSAPAL-RRTLLSAGVELTAASAVTDRKLESDELAAETRASRADLPDTARCFVVGKHGSCPLVSTWRDDGGGGIEDSRSGDLRACEGSQSLSTSQGKPGDGGGADRLAPDKSGIERERRDASDVRARQADGE---------TYGVKSMSLPETRGSQQLSADA--RPILESEARAEIVTLFWLEACNRLGDFRQPRKCEEVFRPQPWPITPFPEVHEGPTEGRVNGARAGPGSV---GVWA-SRRFAVAVTGFVGAERTGWEQLIECMGAEMCKSLKKRGTTHLVCKEAKGDKYKTALKWGVHVVTADWLLRCARQGYQAGSESLYHPERIV 960
            +++DL++KV AMGGSF  NLT+ TTHL AA  DTEKYRVAT MK VVVVRP WV +SC++GRKLPCE +++PPFEGLRIT+TGL +DRK  LR MIESGGG YMGAME   TTHLVAE ATG KYEAA SPEW G++K+V S+W+++  AR                                                               N G+  A                                  G G+ EGVPT++EALALPDGDYLSGCR+M++GF AEA+LPLSLLVRKGCG+RY SPNEE+THV++GDR+LA P+L+SALE+HPC+P +V ALWL E+CRAGRML T+GYL  RP+   R   R  +G G   XXXXXXXXXXXX             RRFGVG NRS+                  DPP K   XXXXXXXXXXX        S+V  SGG+ + G G R    G        H      G  V      GG   +     PAG      W   A                                                  KK  E+           +RP    P +            VD G C  GG    +S    R +   D      G                  RR++ Q     FR  VFVVHGTGL  EEE R AGLV ++GGRCLDP  + S P+L RR+LLSAGVELT+A                  A+ A  P    C       S         DGGG ++D  +        S + +        GGG+   A       +    A+ V    A G          + GV +         + ++     R +LE+EA AE V+  W+EAC+R  + R+P  CE  FRPQPWPI  F +V  G +     G            V A  R  A+AVTGFVGAER GWE LI+ MGA MCK+LKKR TTHLVCKEAKG+K++ A++WGV VVTA WLLRCA  GY+ G E  + P + V
Sbjct:   20 QQEDLREKVNAMGGSFDVNLTMSTTHLLAASLDTEKYRVATGMKGVVVVRPDWVIESCREGRKLPCECHSLPPFEGLRITITGLSMDRKAELRAMIESGGGEYMGAMEARNTTHLVAEEATGMKYEAAISPEWNGSIKVVHSRWLQQSHAR---------------------------------------------------------------NRGNDAA---------------------------------GGGGRPEGVPTKEEALALPDGDYLSGCRVMIVGFPAEAVLPLSLLVRKGCGIRYISPNEELTHVVLGDRALAKPELISALESHPCTPPVVHALWLLETCRAGRMLPTDGYL-NRPT-AARERNRAAAGSGGGGXXXXXXXXXXXXXXXXXXXXXXXXXRRFGVGANRSIXXXXXXXXXXXXXXXXXXDPPKKXXXXXXXXXXXXXXXXXXXXXSSDVFGSGGDESCGDGLRDLTKGAKGAAGSLHDRSVVSGTGVSAGAKVGGQAGIRNAPFPAGEATPTAWDSSAARAAAASVQELVSASEAIPTSAAKAAPAPSARDDILTIVTDTPCPGIPKRKKSEEKXXXXXXLDEDGARPAPRGPRTPKRRRTTTLGGPVDSGKCSAGGG--STSGNSGRISTSSDXXXXXEGAVRXXXXXXXXXXXXXXXRRKRRQPSSSMFRGRVFVVHGTGLGKEEEARMAGLVARHGGRCLDP--SASTPSLLRRSLLSAGVELTSA------------------AAPAAAPFAPPCEEEHVEAS--------GDGGGNVDDHVAVXXXXXXWSSTATI-------GGGSGSFAGSGWAEGQRCAAAAGVLIVGAHGRCPWGALAACSGGVGNXXXXXXXDGETVAMPGGLRALLETEASAEAVSTLWVEACHRGSELRRPGLCERAFRPQPWPIRTFSDVSCGSSFSSSPGTXXXXXXXXRKNVTARDRPPAIAVTGFVGAERAGWELLIQRMGATMCKNLKKRVTTHLVCKEAKGEKFERAIQWGVPVVTAGWLLRCAEHGYEPGLEGSFAPPQSV 946          
BLAST of mRNA_A-nodosum_M_contig1034.3.1 vs. uniprot
Match: A0A835Z0S7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0S7_9STRA)

HSP 1 Score: 123 bits (308), Expect = 1.790e-24
Identity = 103/397 (25.94%), Postives = 157/397 (39.55%), Query Frame = 0
Query:   21 GVTVCSTGLTSMEKDDLKDKVTAMGGSFHGNLTVDTTHLAAACSDTEKYRVATTMKDVVVVR-PSWVSDSCQQGRKLPCEEYAIPPFEGLRITVTGLPIDRKERLREMIESGGGGYMGAMEMNATTHLVAEAATGAKYEAATSPEWRGTVKIVRSQWVEECFARRLRLPEETFPVSTGEDDHTEDDCDEDHEGEERYHESKEEKVVAAQADRTGEHPGRRQRHSSSRNIGSVEATTPSTASSAANASRGGSLYPWGSTGTKADDGETAGDGKVEGVPTRKEALALPDGDYLSGCRLMLIGFAAEALLPLSLLVRKGCGVRYASPNEEITHVIVGDRSLANPKLVSALEAHPCSPALVTALWLQESCRAGRMLATEGYLCPRPS--DGGRFGTRGRSG 414
            G  VC+TGL    ++ ++  V ++GG +   LT  TTHL A  +  +KY +A      + +  P W         +LP  ++A+PPF G+    +GLP  R+             Y G M+++  THLV +A  GAK++AA     RG   +V   WV+ C A   R+PE  + +                                         P                                                + AG  + +     + A A   G  LSGCR++L GFAA     L+  +R+    R+A P+  +THV++GD +L +   + AL +H  +P +VTA W+ +S  A   L  E YL P  +  D  R   R RSG
Sbjct:  259 GCVVCTTGLEPSLRERVRRAVESLGGEYSPGLTHATTHLLARAAAGDKYAIAAARPAAIAIATPDWALRCAAARARLPAADFALPPFAGVHACCSGLPAARRXXXXXXXXXXXXAYRGDMDVDVVTHLVTDAPRGAKFDAARRA--RGCC-VVSPAWVDACVAAGARVPEAQYAI-----------------------------------------PXXXXXXXXXXXXXXXXXXX---------------XXXXXXXXXXXXXSDVAGSPQGDDAFAAQLARARESG-ALSGCRVLLAGFAAPRAAALAAALRRARATRHAQPHPLLTHVVLGDPALVDAHTLEALASHRRAPRVVTAQWVFDSAAAAAALPAERYLAPPIARRDSSRQDARTRSG 595          
BLAST of mRNA_A-nodosum_M_contig1034.3.1 vs. uniprot
Match: K1PRR5_CRAGI (DNA topoisomerase 2-binding protein 1 n=1 Tax=Crassostrea gigas TaxID=29159 RepID=K1PRR5_CRAGI)

HSP 1 Score: 122 bits (305), Expect = 4.230e-24
Identity = 111/394 (28.17%), Postives = 176/394 (44.67%), Query Frame = 0
Query:   19 MLGVTVCSTGLTSMEKDDLKDKVTAMGGSFHGNLTVDTTHLAAACSDTEKYRVATTMKDVVVVRPSWVSDSCQ-------QGRKLPCEEYAIPPFEGLRITVTGLPIDRKERLREMIESGGGGYMGAMEMNATTHLVAEAATGAKYEAATSPEWRGTVKIVRSQWVEECFARRLRLPEETFPVSTGEDDHTEDDCDEDHEGEERYHESKEEKVVAAQADRTGEHPGRRQRHSSSR------NIGSVEATTPSTASSAANASRGGSLYPWGSTGTKADDGETAGDGKVEGVPTRKEALALPDGDYLSGCRLMLIGFAAEALLPLSLLVRKGCGVRYASPNEEITHVIVGDRSLANPKLVSALEAHPCSPALVTALWLQESCRAGRMLATEGYLCP 399
            M  V VC T L    +++L +KV AMGG+   +LT   THL A    ++KY+VA +    + + PSWV+   +        G      EY+ P F+GL ITV+GL  + + ++++ +E  GG Y G M++N  THL+     GAKYE A   +WR  + IV+S W+ +   +   L E+ F ++   +   E                    V  +  ++     G R R S+        N+  ++ T  +  SS     R        STG    + ET     VE +   K    L    +L GC++ L GF   AL  L  ++  G   R  + +E +TH ++G+R     K +  L+     P +VT +W+ E  R G  +  + Y  P
Sbjct:  108 MKDVVVCCTNLVKQLRNELHEKVEAMGGTVSRDLTSSVTHLIAGEVGSKKYQVAASAGKQIYL-PSWVNKVWEASQTKHIHGSSSQFLEYSCPIFKGLVITVSGLDSEERNQVKKAVEDEGGKYTGEMKVNECTHLIINKPKGAKYEFAK--KWR--INIVKSDWLYDSIEKGYCLEEKQFSLTDNSETKAE--------------------VKTSTPEKDN---GPRDRMSTLADISCISNVSMIQTTHLNETSSTTQNRR--------STG----EFETT----VESIDLTKSTSDL----FLDGCKIYLSGFRGVALEKLRKVINAGGATRLNTLSENVTHAVIGERI---EKDLEMLKTAAFRPHIVTPVWMAECFRQGFTVNEDPYRLP 450          
BLAST of mRNA_A-nodosum_M_contig1034.3.1 vs. uniprot
Match: UPI00148AD0A1 (DNA topoisomerase 2-binding protein 1-A n=1 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148AD0A1)

HSP 1 Score: 122 bits (305), Expect = 5.140e-24
Identity = 112/393 (28.50%), Postives = 178/393 (45.29%), Query Frame = 0
Query:   19 MLGVTVCSTGLTSMEKDDLKDKVTAMGGSFHGNLTVDTTHLAAACSDTEKYRVATTMKDVVVVRPSWVSDSCQ-------QGRKLPCEEYAIPPFEGLRITVTGLPIDRKERLREMIESGGGGYMGAMEMNATTHLVAEAATGAKYEAATSPEWRGTVKIVRSQWVEECFARRLRLPEETFPVSTGEDDHTEDDCDEDHEGEERYHESKEEKVVAAQADRTGEHPGRRQRHSSSRNIG-----SVEATTPSTASSAANASRGGSLYPWGSTGTKADDGETAGDGKVEGVPTRKEALALPDGDYLSGCRLMLIGFAAEALLPLSLLVRKGCGVRYASPNEEITHVIVGDRSLANPKLVSALEAHPCSPALVTALWLQESCRAGRMLATEGYLCP 399
            M  V VC T L    +++L +KV AMGG+   +LT   THL A    ++KY+VA +    + + PSWV+   +        G      EY+ P F+GL ITV+GL  + + ++++ +E  GG Y G M++N  THL+     GAKYE A   +WR  + IV+S W+ +   +   L E+ F ++   +   E                    V  +  ++     G R R S+  +I      S+  TT    +S+   +R        STG    + ET     VE +   K    L    +L GC++ L GF   AL  L  ++  G   R  + +E +TH ++G+R     K +  L+     P +VT +W+ E  R G  +  + Y  P
Sbjct:  108 MKDVVVCCTNLVKQLRNELHEKVEAMGGTVSRDLTSSVTHLIAGEVGSKKYQVAASAGKQIYL-PSWVNKVWEASQTKHIHGSSSQFLEYSCPIFKGLVITVSGLDSEERNQVKKAVEDEGGKYTGEMKVNECTHLIINKPKGAKYEFAK--KWR--INIVKSDWLYDSIEKGYCLEEKQFSLTDNSETKAE--------------------VKTSTPEKDN---GPRDRMSTLADISCISNVSIIQTTHLNETSSTTQNRR-------STG----EFETT----VESIDLTKSTSDL----FLDGCKIYLSGFRGVALEKLRKVINAGGATRLNTLSENVTHAVIGERI---EKDLETLKTAAFRPHVVTPVWMAECFRQGFTVNEDPYRLP 450          
BLAST of mRNA_A-nodosum_M_contig1034.3.1 vs. uniprot
Match: UPI00145891B0 (LOW QUALITY PROTEIN: DNA topoisomerase 2-binding protein 1-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI00145891B0)

HSP 1 Score: 121 bits (303), Expect = 8.890e-24
Identity = 105/388 (27.06%), Postives = 167/388 (43.04%), Query Frame = 0
Query:   19 MLGVTVCSTGLTSMEKDDLKDKVTAMGGSFHGNLTVDTTHLAAACSDTEKYRVATTMKDVVVVRPSWVSDSCQ-------QGRKLPCEEYAIPPFEGLRITVTGLPIDRKERLREMIESGGGGYMGAMEMNATTHLVAEAATGAKYEAATSPEWRGTVKIVRSQWVEECFARRLRLPEETFPVSTGEDDHTEDDCDEDHEGEERYHESKEEKVVAAQADRTGEHPGRRQRHSSSRNIGSVEATTPSTASSAANASRGGSLYPWGSTGTKADDGETAGDGKVEGVPTRKEALALPDGD-YLSGCRLMLIGFAAEALLPLSLLVRKGCGVRYASPNEEITHVIVGDRSLANPKLVSALEAHPCSPALVTALWLQESCRAGRMLATEGYLC 398
            M  V  C T L    +D++ +K+  M GS   + T   THL A    ++KY+VA ++         WV+   +        G     +EY  P F+GL ITV+GL    +  ++++I S GG Y G M++N  THL+     G KYE A   +W+  + IVR++W+ +C  +      E + V    D                       K +A  +             +  +++    A+T +  S  AN S  G +    +T T         D  + G+      L  P  D +L GC++ L GF  +AL  +  ++  G G R    NE +THVIVG+R     K +  L+     P +V A+WL E  + G  +  + Y+C
Sbjct:  108 MRNVVACCTNLDKQTRDEVHEKIELMSGSVGKDFTEAVTHLIAGEVGSKKYQVAASLGKTDHAA-EWVNKVWEVSQTRAVHGMDATLQEYRCPIFKGLVITVSGLDPQERNDVKKLINSEGGKYTGEMKVNECTHLIINNPKGTKYEFAK--KWK--LNIVRTEWLYDCIGKGFCQETEKYKVVAETD-----------------------KSLAKTS-------------TPEKDVPHTRASTIADLSCIANVSVIGHINETAATTTTTHKSFEETDTTLNGID-----LTQPPADLFLDGCKVYLSGFRGQALEKVRKVINAGGGTRLNHLNENVTHVIVGERL---DKDIDFLKTATFRPHVVGAVWLAECYKQGHTVDEQPYIC 446          
BLAST of mRNA_A-nodosum_M_contig1034.3.1 vs. uniprot
Match: A0A8B8EDC5_CRAVI (DNA topoisomerase 2-binding protein 1-like isoform X1 n=2 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8EDC5_CRAVI)

HSP 1 Score: 119 bits (298), Expect = 3.430e-23
Identity = 107/393 (27.23%), Postives = 177/393 (45.04%), Query Frame = 0
Query:   19 MLGVTVCSTGLTSMEKDDLKDKVTAMGGSFHGNLTVDTTHLAAACSDTEKYRVATTMKDVVVVRPSWVSDSCQ-------QGRKLPCEEYAIPPFEGLRITVTGLPIDRKERLREMIESGGGGYMGAMEMNATTHLVAEAATGAKYEAATSPEWRGTVKIVRSQWVEECFARRLRLPEETFPVSTGEDDHTEDDCDEDHEGEERYHESKEEKVVAAQADRTGEHPGRRQRHSSSRNIGSVE-----ATTPSTASSAANASRGGSLYPWGSTGTKADDGETAGDGKVEGVPTRKEALALPDGDYLSGCRLMLIGFAAEALLPLSLLVRKGCGVRYASPNEEITHVIVGDRSLANPKLVSALEAHPCSPALVTALWLQESCRAGRMLATEGYLCP 399
            M  V +C T L   ++++L +KV AMGG+   +LT + THL A    ++KY+VA +    + + P WV    +        G      EYA P F+GL ITV+GL  + + ++++ +E+ GG Y G M++N  THL+     G KYE A   +W+  + IV+S W+ +   +   L E+ F +S    + +E                    V  +  ++     G R R S+  +I  +       TT    +S+   +R              D+ ET     VE +   K    L    +L GC++ L GF   AL  L  ++  G   R  + ++ +THV++G+R     K +  L      P +VT +W+ E  R G  ++ + Y  P
Sbjct:  108 MKDVVLCCTNLVKQKRNELHEKVEAMGGTVSRDLTNNVTHLIAGEVGSKKYQVAASTGKQIYL-PCWVDKVWEASQTKHIHGSSSQFLEYACPIFKGLVITVSGLDSEERNQVKKAVEAEGGKYTGEMKVNECTHLIINKPKGPKYEFAK--KWK--IHIVKSDWLYDSIEKGYCLEEKQFALSKDAGEKSE--------------------VKTSTPEKES---GPRDRMSTLADISCISNVSMIQTTHLNETSSTTQNR-----------KSTDEFETT----VESIDLTKSTSDL----FLDGCKIYLSGFRGVALEKLRKVINAGGATRLNTLSDNVTHVVIGERL---EKDLEMLRNAVNRPHVVTPVWMAECFRQGFTVSEDPYRLP 450          
BLAST of mRNA_A-nodosum_M_contig1034.3.1 vs. uniprot
Match: L8HKJ6_ACACA (Subunit of DNA polymerase II n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HKJ6_ACACA)

HSP 1 Score: 119 bits (297), Expect = 4.440e-23
Identity = 63/178 (35.39%), Postives = 100/178 (56.18%), Query Frame = 0
Query:   17 KIMLGVTVCSTGLTSMEKDDLKDKVTAMGGSFHGNLTVDTTHLAAACSDTEKYRVATTMKDVVVVRPSWVSDSCQQGRKLPCEEYAIPPFEGLRITVTGLPIDRKERLREMIESGGGGYMGAMEMNATTHLVAEAATGAKYEAATSPEWRGTVKIVRSQWVEECFARRLRLPEETFPV 194
            + +LG  VCST +++  +  L  +V  MGG +H + T   TH+ A    +EKY+VA       +V PSWV++  +Q   +P +++ +PPF GL +TVTG P D +E+++ +    GG Y   +  + T HL+ E     K++ A    W G+VK+V  +W+ E   +R  L EE FPV
Sbjct:   99 RFLLGAVVCSTAISADMRSALVQRVLWMGGEWHMDFTNTVTHMLAYMPGSEKYKVAVQRGRPALVHPSWVTECWKQQALVPIDQFPVPPFTGLTMTVTGFPHDEREKMKRLCMQHGGQYSSDLNRSCT-HLIVERPGSKKHQYALL--W-GSVKVVHPRWLYESVEKRACLKEEDFPV 272          
BLAST of mRNA_A-nodosum_M_contig1034.3.1 vs. uniprot
Match: UPI002009D3D5 (LOW QUALITY PROTEIN: DNA topoisomerase 2-binding protein 1 n=1 Tax=Salvia hispanica TaxID=49212 RepID=UPI002009D3D5)

HSP 1 Score: 115 bits (289), Expect = 4.510e-23
Identity = 110/408 (26.96%), Postives = 172/408 (42.16%), Query Frame = 0
Query:   21 GVTVCSTGLTSMEKDDLKDKVTAMGGSFHGNLTVDTTHLAAACSDTEKYRVATTMKDVVVVRPSWVSDSCQQGRKLPCEEYAIPPFEGLRITVTGLPIDRKERLREMIESGGGGYMGAMEMNATTHLVAEAA--------------TGAKYEAATSPEWRGTVKIVRSQWVEECFARRLRLPEETFPVSTGEDDHTEDDCDEDHEGEERYHESKEEKVVAAQADRTGEHPGRRQRHSSSRNIGSVEATTPSTASSAANASRGGS-----------LYPWGSTGTKADDGETAGDGKVEGVPTRKEALA----LPDGD-YLSGCRLMLIGFAAEALLPLSLLVRKGCGVRYASPNEEITHVIVGDRSLANPKLVSALEAHPCSPALVTALWLQE-SCRAGRMLATEGYL 397
            GV + ++G     KD ++ KV AMGG      + D + +       +KY+ A T     +V   W+    ++ R +P E Y +PPF GL I V+G+PID  + + +++   GG Y   +    + HL+   +               G KY  A    WR  + IV  +W  +  ARR  L E++FPV                               +    +T EH  + +    +RN   + ++ PS + S  N S               L         +  G      K + VP     +A      DGD YLS CR++L+GF A  L  L  +VR+G G RY S  E +THV+VG+ S    K + +L A     ++V A WL+E S R   +  ++G++
Sbjct:  101 GVNIVTSGFDKDVKDAIRKKVNAMGGQVTEKTSSDVSFIIVKDVLVQKYKWALTQARKPIVTTEWLEQCWKEHRVVPHEPYRVPPFSGLTICVSGIPIDECKEIEKLVVQNGGIYSSELTKRCS-HLICNISYQLTHLFGVCYFTPEGDKYMVAK--RWR-IIYIVNRKWFHQSIARRACLMEDSFPVQQS---------------------------SSGSTVKTLEHHSQGK---GTRNSQPISSSNPSVSESDTNLSAQDMEPDVENLLTNILCTSSEVPHISKRGNDVPTEKQKNVPDFTRCVADDSESEDGDLYLSECRILLLGFEASELRKLVSMVRQGGGSRYMSVRENLTHVVVGNPSEKEMKEIRSLSAFGVV-SIVKASWLEECSSRKKEVPVSQGHI 473          
BLAST of mRNA_A-nodosum_M_contig1034.3.1 vs. uniprot
Match: A0A5N6LA03_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6LA03_9ASTR)

HSP 1 Score: 115 bits (288), Expect = 3.340e-22
Identity = 106/376 (28.19%), Postives = 167/376 (44.41%), Query Frame = 0
Query:   19 MLGVTVCSTGLTSMEKDDLKDKVTAMGGSFHGNLTVDTTHLAAACSDTEKYRVATTMKDVVVVRPSWVSDSCQQGRKLPCEEYAIPPFEGLRITVTGLPIDRKERLREMIESGGGGYMGAMEMNATTHLVAEAATGAKYEAATSPEWRGTVKIVRSQWVEECFARRLRLPEETFPVSTGEDDHTEDDCDEDHEGEERYHESKEEKVVAAQADRTGEHPGRRQRHSSSRNI---GSVEATTPSTAS----SAANASRGGS---LYPWGSTGTKAD-DGETAGDGKVEGVPTRKEALALPDGDYLSGCRLMLIGFAAEALLPLSLLVRKGCGVRYASPNEEITHVIVGDRSLANPKLVSALEAHPCSPALVTALWLQE 383
            M GV + ++G    EKD++   VTAMGG      + D + +        KY+ A       +V  SW+    ++ R +P E Y   PF GL I+VT +P+D ++ + +++   GG Y   +    +THL+ +     KY+ A    W G ++IV   W  +  ARR  L EE++PV                             V +  + RT     R    S+ ++I   G V+A   +T S    S ++ S  GS     P     T  + D   A D + E            D  YL  C++ L+GF A  +  L  ++R+GCG RY S NE++TH++VG  S +  K V +L A      + T +WL++
Sbjct:   99 MDGVKILASGFEVKEKDEIAKLVTAMGGVLQTKASSDVSFVIVKNVLAAKYKWALNNLKKPIVSESWLHQCWKEHRVVPHESYRALPFSGLTISVTQVPLDARKEIEKLVLQNGGKYSAELTRK-STHLICD-----KYKVAK--RW-GHIQIVNRMWFNQSVARRACLNEESYPVLKS-------------------------PVTSMNSQRTSSKVARNSEFSAHQDITCDGMVDADLQTTLSQNMASISDISVQGSDDNTPPCIQQKTSFNIDASVAEDSQSE------------DNLYLLNCKIHLVGFDASEMRRLVNMIRRGCGSRYMSLNEQLTHIVVGTPSESEKKEVRSLSAMGVINVVKT-VWLED 427          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1034.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJL2_9PHAE2.610e-15938.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G795_ECTSI6.970e-15239.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z0S7_9STRA1.790e-2425.94Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
K1PRR5_CRAGI4.230e-2428.17DNA topoisomerase 2-binding protein 1 n=1 Tax=Cras... [more]
UPI00148AD0A15.140e-2428.50DNA topoisomerase 2-binding protein 1-A n=1 Tax=Cr... [more]
UPI00145891B08.890e-2427.06LOW QUALITY PROTEIN: DNA topoisomerase 2-binding p... [more]
A0A8B8EDC5_CRAVI3.430e-2327.23DNA topoisomerase 2-binding protein 1-like isoform... [more]
L8HKJ6_ACACA4.440e-2335.39Subunit of DNA polymerase II n=1 Tax=Acanthamoeba ... [more]
UPI002009D3D54.510e-2326.96LOW QUALITY PROTEIN: DNA topoisomerase 2-binding p... [more]
A0A5N6LA03_9ASTR3.340e-2228.19Uncharacterized protein n=1 Tax=Mikania micrantha ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001357BRCT domainSMARTSM00292BRCT_7coord: 868..945
e-value: 1.9E-9
score: 47.4
coord: 307..388
e-value: 2.5E-5
score: 33.7
coord: 103..184
e-value: 1.1E-7
score: 41.6
coord: 16..93
e-value: 1.1E-10
score: 51.5
IPR001357BRCT domainPFAMPF12738PTCB-BRCTcoord: 876..937
e-value: 2.5E-18
score: 65.8
coord: 109..176
e-value: 1.6E-10
score: 40.8
coord: 22..85
e-value: 4.2E-13
score: 49.1
IPR001357BRCT domainPROSITEPS50172BRCTcoord: 305..398
score: 9.50044
IPR001357BRCT domainPROSITEPS50172BRCTcoord: 101..194
score: 18.3472
IPR001357BRCT domainPROSITEPS50172BRCTcoord: 14..103
score: 17.98554
IPR001357BRCT domainPROSITEPS50172BRCTcoord: 876..955
score: 12.11552
IPR036420BRCT domain superfamilyGENE3D3.40.50.10190BRCT domaincoord: 13..102
e-value: 1.7E-19
score: 72.0
IPR036420BRCT domain superfamilyGENE3D3.40.50.10190BRCT domaincoord: 103..200
e-value: 1.7E-18
score: 68.6
IPR036420BRCT domain superfamilyGENE3D3.40.50.10190BRCT domaincoord: 871..957
e-value: 1.2E-20
score: 75.6
IPR036420BRCT domain superfamilyGENE3D3.40.50.10190BRCT domaincoord: 299..401
e-value: 8.0E-12
score: 47.2
IPR036420BRCT domain superfamilySUPERFAMILY52113BRCT domaincoord: 807..949
IPR036420BRCT domain superfamilySUPERFAMILY52113BRCT domaincoord: 304..398
IPR036420BRCT domain superfamilySUPERFAMILY52113BRCT domaincoord: 15..104
IPR036420BRCT domain superfamilySUPERFAMILY52113BRCT domaincoord: 104..195
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 714..791
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 192..294
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 549..587
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1004..1043
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 726..740
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1210..1301
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 568..587
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 243..273
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 212..241
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1268..1289
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 752..770
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 402..518
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1366..1394
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 492..506
NoneNo IPR availablePANTHERPTHR13561DNA REPLICATION REGULATOR DPB11-RELATEDcoord: 16..1010
NoneNo IPR availableCDDcd17731BRCT_TopBP1_rpt2_likecoord: 104..184
e-value: 1.23497E-22
score: 91.0622
NoneNo IPR availableCDDcd17731BRCT_TopBP1_rpt2_likecoord: 876..945
e-value: 5.3272E-18
score: 77.9654
NoneNo IPR availableCDDcd17731BRCT_TopBP1_rpt2_likecoord: 17..93
e-value: 2.86456E-21
score: 87.2102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1034contigA-nodosum_M_contig1034:17018..42816 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1034.3.1mRNA_A-nodosum_M_contig1034.3.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1034 16842..42855 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1034.3.1 ID=prot_A-nodosum_M_contig1034.3.1|Name=mRNA_A-nodosum_M_contig1034.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1395bp
MQRGRHGRGRVRGSLEKIMLGVTVCSTGLTSMEKDDLKDKVTAMGGSFHG
NLTVDTTHLAAACSDTEKYRVATTMKDVVVVRPSWVSDSCQQGRKLPCEE
YAIPPFEGLRITVTGLPIDRKERLREMIESGGGGYMGAMEMNATTHLVAE
AATGAKYEAATSPEWRGTVKIVRSQWVEECFARRLRLPEETFPVSTGEDD
HTEDDCDEDHEGEERYHESKEEKVVAAQADRTGEHPGRRQRHSSSRNIGS
VEATTPSTASSAANASRGGSLYPWGSTGTKADDGETAGDGKVEGVPTRKE
ALALPDGDYLSGCRLMLIGFAAEALLPLSLLVRKGCGVRYASPNEEITHV
IVGDRSLANPKLVSALEAHPCSPALVTALWLQESCRAGRMLATEGYLCPR
PSDGGRFGTRGRSGDGGGGDEDRGGGGGGGGAVRRFGVGPNRSLGGTIAA
HAGHPGDPPTKSKANGDGDGGGGNGKMKDAGSNVSGGENAAGSGHRRREV
GHHIEAQEGHAVGGGMVRVSMTSKPAGWAEVAKKELERGRFIAHARMGKS
RPKLEAPGSTNVDDGGCRDGGSVRESSNKHQRAAEDRDFAGCRGGNDSSR
RRKWQFFRKHVFVVHGTGLTDEEEQRAAGLVVKYGGRCLDPDDTRSAPAL
RRTLLSAGVELTAASAVTDRKLESDELAAETRASRADLPDTARCFVVGKH
GSCPLVSTWRDDGGGGIEDSRSGDLRACEGSQSLSTSQGKPGDGGGADRL
APDKSGIERERRDASDVRARQADGETYGVKSMSLPETRGSQQLSADARPI
LESEARAEIVTLFWLEACNRLGDFRQPRKCEEVFRPQPWPITPFPEVHEG
PTEGRVNGARAGPGSVGVWASRRFAVAVTGFVGAERTGWEQLIECMGAEM
CKSLKKRGTTHLVCKEAKGDKYKTALKWGVHVVTADWLLRCARQGYQAGS
ESLYHPERIVERPPVEQKVIAAVATVTSEEMVSKAVAAKSAALPLTLEVY
TSTVGTSSPDEDHTWPAGGAGGMGAQQAARSEVEAGGDRRTEHSSVLRGV
ANVVPWTTSRPVHGSSAASTMGGAFSDVTSSQRGVATEMTEALEPVGVEG
RREDLADGQGISAAVTPEAPAAAVKDDLAPATSDLERQLRSMLSAADVGG
NGVATNAITTSATAGLEVPAHRRRLRLNAWGLRPSTLSAGSAVLVRAGEG
GVSSRLKAMASTTARETGLDPMPAGTSGQSPTRQMRGGEADEDNKQAVES
AKDGAGASKGLQDGGGRKRPANFDKTFVARGRRRAIGGHERSGGALSGLS
NERRYSDGHLNWPPRAGGGSVLTERLPREGQENDPQLSHALLQTSMRAET
VFGRTRHDGQAPCVMGNNRGFWDGRGPPTEQQHLEEESQIVTYE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001357BRCT_dom
IPR036420BRCT_dom_sf