prot_A-nodosum_M_contig1033.14.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1033.14.1
Unique Nameprot_A-nodosum_M_contig1033.14.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length128
Homology
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BLAST of mRNA_A-nodosum_M_contig1033.14.1 vs. uniprot
Match: D8LEX1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEX1_ECTSI)

HSP 1 Score: 133 bits (334), Expect = 1.430e-37
Identity = 72/125 (57.60%), Postives = 87/125 (69.60%), Query Frame = 0 
Query:    1 MSSPLTKPASPWAVKIAQEGKDQGLPHKKIRQKLVLQGLEPELIDNVLNGDMDSSGRDQGPLEPSSPPTSPMRRQVSTRKFHDMLETGISPAAVRQKMAMAGCPPEEIKCFFATHPITTKVEEQE 125
            M+SP  K A+PWAVK+  +GK+QG+P +KIRQKLVL+GLEP+LID V+     S       +EPSSP TSP RRQ+S RKFHDML  G+ PA VRQKMAM GC PEEI  FFA+       E +E
Sbjct:    1 MASP-GKAAAPWAVKLVHDGKEQGVPAEKIRQKLVLEGLEPDLIDGVVEAG--SLSAKLHTIEPSSPCTSPQRRQLSARKFHDMLSVGLPPAVVRQKMAMDGCQPEEINNFFASAGGVATAEAEE 122
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1033.14.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LEX1_ECTSI1.430e-3757.60Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..75
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..76
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1033contigA-nodosum_M_contig1033:24899..30988 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1033.14.1mRNA_A-nodosum_M_contig1033.14.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1033 24362..31655 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1033.14.1 ID=prot_A-nodosum_M_contig1033.14.1|Name=mRNA_A-nodosum_M_contig1033.14.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=128bp
MSSPLTKPASPWAVKIAQEGKDQGLPHKKIRQKLVLQGLEPELIDNVLNG
DMDSSGRDQGPLEPSSPPTSPMRRQVSTRKFHDMLETGISPAAVRQKMAM
AGCPPEEIKCFFATHPITTKVEEQEVA*
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