prot_A-nodosum_M_contig1031.7.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1031.7.1
Unique Nameprot_A-nodosum_M_contig1031.7.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length64
Homology
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BLAST of mRNA_A-nodosum_M_contig1031.7.1 vs. uniprot
Match: D7FTP3_ECTSI (Putative GPI-anchor transamidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTP3_ECTSI)

HSP 1 Score: 62.4 bits (150), Expect = 7.730e-10
Identity = 31/42 (73.81%), Postives = 36/42 (85.71%), Query Frame = 0 
Query:   10 SRPLSAFDHQVTLGALMNSLRSKSLLSTPTVELKGWTGPPLN 51
            S PL+   + VTLGALM+S+R KSLLS+PTVELKGWTGPPLN
Sbjct:  301 SAPLN-LRNDVTLGALMHSMRPKSLLSSPTVELKGWTGPPLN 341
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1031.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FTP3_ECTSI7.730e-1073.81Putative GPI-anchor transamidase n=2 Tax=Ectocarpu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1031contigA-nodosum_M_contig1031:10227..10981 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1031.7.1mRNA_A-nodosum_M_contig1031.7.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1031 10227..10983 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1031.7.1 ID=prot_A-nodosum_M_contig1031.7.1|Name=mRNA_A-nodosum_M_contig1031.7.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=64bp
GLLLRLGCASRPLSAFDHQVTLGALMNSLRSKSLLSTPTVELKGWTGPPL
NKIPVTDFFGSVLS
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