prot_A-nodosum_M_contig103.17.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig103.17.1
Unique Nameprot_A-nodosum_M_contig103.17.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length214
Homology
BLAST of mRNA_A-nodosum_M_contig103.17.1 vs. uniprot
Match: A0A6H5L450_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L450_9PHAE)

HSP 1 Score: 248 bits (633), Expect = 2.070e-81
Identity = 121/149 (81.21%), Postives = 133/149 (89.26%), Query Frame = 0
Query:   65 VRTAQHAWEKSCYFNIDYKIDENDTVHDAISRMSAYNVGCLIVTKNGVVSGIISERDYVCKVSLLGRQSKDTKVKEICTQGQKMIVAKRSDTLETCVEKMITAGIRHLPVIDDDTGELFGLISVKDLVKEYIKDRDHLICKMLGLPTSS 213
            VRTAQHAWEKSCYFNIDYKIDE  TV+DAISRMSAYNVGCLIVTKNGVVSGIISERDYVCK++LLG+ SKDT VKEICT+G KM+ A RSDT+E CV+KMI A +RHLPVIDDDTGE+FGLIS  DLVKEY K+RD L+ KMLGLP SS
Sbjct:    4 VRTAQHAWEKSCYFNIDYKIDEASTVYDAISRMSAYNVGCLIVTKNGVVSGIISERDYVCKIALLGKSSKDTTVKEICTRGPKMVAAARSDTIEACVKKMIAADVRHLPVIDDDTGEVFGLIS--DLVKEYTKERDDLLMKMLGLPPSS 150          
BLAST of mRNA_A-nodosum_M_contig103.17.1 vs. uniprot
Match: D7FXG6_ECTSI (CBS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXG6_ECTSI)

HSP 1 Score: 195 bits (495), Expect = 6.740e-61
Identity = 94/117 (80.34%), Postives = 105/117 (89.74%), Query Frame = 0
Query:   97 MSAYNVGCLIVTKNGVVSGIISERDYVCKVSLLGRQSKDTKVKEICTQGQKMIVAKRSDTLETCVEKMITAGIRHLPVIDDDTGELFGLISVKDLVKEYIKDRDHLICKMLGLPTSS 213
            MSAYNVGCLIVTKNGVVSGIISERDYVCK++LLG+ SKDT VKEICT+G KM+ A RSDT+E CV+KMI A +RHLPVIDDDTGE+FGLISVKDLVKEY K+RD L+ KMLGLP SS
Sbjct:    1 MSAYNVGCLIVTKNGVVSGIISERDYVCKIALLGKASKDTTVKEICTRGPKMVAAARSDTIEACVKKMIAADVRHLPVIDDDTGEVFGLISVKDLVKEYTKERDDLLMKMLGLPPSS 117          
BLAST of mRNA_A-nodosum_M_contig103.17.1 vs. uniprot
Match: A0A835ZG49_9STRA (CBS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG49_9STRA)

HSP 1 Score: 194 bits (494), Expect = 1.040e-59
Identity = 88/144 (61.11%), Postives = 117/144 (81.25%), Query Frame = 0
Query:   65 VRTAQHAWEKSCYFNIDYKIDENDTVHDAISRMSAYNVGCLIVTKNGVVSGIISERDYVCKVSLLGRQSKDTKVKEICTQGQKMIVAKRSDTLETCVEKMITAGIRHLPVIDDDTGELFGLISVKDLVKEYIKDRDHLICKMLG 208
            VRTAQHAWEKSCY+NIDY ID+   V+DA+ RM+A+NVGCL+VT+     G+I+ERDYVCKV+LLGR S++T +KE+ T  +  +V +RSD+++TCV+KMITA +RHLPV+ DD  E+ GLISVKDLVKEY K++D L+ K+ G
Sbjct:   44 VRTAQHAWEKSCYYNIDYMIDQESKVYDAVQRMAAFNVGCLVVTEQSKPVGVITERDYVCKVALLGRNSRETFIKEVATALK--VVVRRSDSIDTCVKKMITADVRHLPVLSDDNDEIIGLISVKDLVKEYTKEKDELLTKLFG 185          
BLAST of mRNA_A-nodosum_M_contig103.17.1 vs. uniprot
Match: A0A7S1XTH5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XTH5_9STRA)

HSP 1 Score: 177 bits (450), Expect = 4.110e-53
Identity = 75/140 (53.57%), Postives = 113/140 (80.71%), Query Frame = 0
Query:   67 TAQHAWEKSCYFNIDYKIDENDTVHDAISRMSAYNVGCLIVTKNGVVSGIISERDYVCKVSLLGRQSKDTKVKEICTQGQKMIVAKRSDTLETCVEKMITAGIRHLPVIDDDTGELFGLISVKDLVKEYIKDRDHLICKM 206
            TA  AWEKSCYF ID+KI ++ +V++A+ + +AYN+GCL+V K   V+GIISERDYV K++LLGR+S DTKV E+CT G  M+VA+ +D+++ C+ KM+   IRHLPV++++TG++ G++SVKDL+KE +K++D +I K+
Sbjct:   34 TASTAWEKSCYFKIDFKISQDASVYEAVQKFAAYNIGCLVVMKGDEVAGIISERDYVTKIALLGRKSVDTKVSEVCTSGANMVVARTTDSVQECMGKMLARDIRHLPVVEEETGQVVGMLSVKDLIKELVKEKDEIITKL 173          
BLAST of mRNA_A-nodosum_M_contig103.17.1 vs. uniprot
Match: A0A7S1U998_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U998_9STRA)

HSP 1 Score: 177 bits (450), Expect = 7.160e-52
Identity = 75/140 (53.57%), Postives = 113/140 (80.71%), Query Frame = 0
Query:   67 TAQHAWEKSCYFNIDYKIDENDTVHDAISRMSAYNVGCLIVTKNGVVSGIISERDYVCKVSLLGRQSKDTKVKEICTQGQKMIVAKRSDTLETCVEKMITAGIRHLPVIDDDTGELFGLISVKDLVKEYIKDRDHLICKM 206
            TA  AWEKSCYF ID+KI ++ +V++A+ + +AYN+GCL+V K   V+GIISERDYV K++LLGR+S DTKV E+CT G  M+VA+ +D+++ C+ KM+   IRHLPV++++TG++ G++SVKDL+KE +K++D +I K+
Sbjct:  130 TASTAWEKSCYFKIDFKISQDASVYEAVQKFAAYNIGCLVVMKGDEVAGIISERDYVTKIALLGRKSVDTKVSEVCTSGANMVVARTTDSVQECMGKMLARDIRHLPVVEEETGQVVGMLSVKDLIKELVKEKDEIITKL 269          
BLAST of mRNA_A-nodosum_M_contig103.17.1 vs. uniprot
Match: A0A835YGF7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGF7_9STRA)

HSP 1 Score: 172 bits (435), Expect = 1.550e-50
Identity = 84/161 (52.17%), Postives = 120/161 (74.53%), Query Frame = 0
Query:   47 SAPGKGLRGFSGTAADDGVRTAQHAWEKSCYFNIDYKIDENDTVHDAISRMSAYNVGCLIVT-KNGVVSGIISERDYVCKVSLLGRQSKDTKVKEICTQGQKMIVAKRSDTLETCVEKMITAGIRHLPVIDDDTGELFGLISVKDLVKEYIKDRDHLICKM 206
            S PG    G + +  ++ + +A+ A EKSCYF ID+KIDE+ TV++A+ R +AYN+G L VT K G V GIISERDYVCK++LLGRQS+ TKVKE+ T G  +IVAK+SD+L  C+ KM+   IRHLPV+D+++G + G++S+KDL+KE   +++ LI K+
Sbjct:   37 SEPGSHSYGETPSTVNE-LSSARSALEKSCYFKIDFKIDEDATVYEAVQRFAAYNIGALAVTDKGGKVVGIISERDYVCKIALLGRQSQTTKVKEVATMGANIIVAKKSDSLHDCMRKMLARDIRHLPVLDEESGTVVGMLSIKDLIKEVAHEKEALIAKL 196          
BLAST of mRNA_A-nodosum_M_contig103.17.1 vs. uniprot
Match: A0A7R9UAT3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAT3_9STRA)

HSP 1 Score: 170 bits (430), Expect = 1.380e-49
Identity = 79/141 (56.03%), Postives = 111/141 (78.72%), Query Frame = 0
Query:   67 TAQHAWEKSCYFNIDYKIDENDTVHDAISRMSAYNVGCLIV-TKNGVVSGIISERDYVCKVSLLGRQSKDTKVKEICTQGQKMIVAKRSDTLETCVEKMITAGIRHLPVIDDDTGELFGLISVKDLVKEYIKDRDHLICKM 206
            TA +AWEKSCYF ID+KIDE+ +V++A+ R +AYN+GCL+V +K G V+GIISERDYV KV+LLGR+S D KV EICT    M+VA  SD+++ C+  M+   IRHLPV+ +D G++ G++SVKDL+KE +K++D +I K+
Sbjct:   72 TASNAWEKSCYFKIDFKIDEDASVYEAVQRFAAYNIGCLVVVSKEGKVAGIISERDYVTKVALLGRKSVDVKVSEICTSEANMVVANTSDSVQDCMGMMLARDIRHLPVVGED-GDVVGMLSVKDLIKELVKEKDEMISKL 211          
BLAST of mRNA_A-nodosum_M_contig103.17.1 vs. uniprot
Match: A0A6T9YKC1_9STRA (Hypothetical protein n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A6T9YKC1_9STRA)

HSP 1 Score: 158 bits (399), Expect = 3.200e-45
Identity = 78/181 (43.09%), Postives = 121/181 (66.85%), Query Frame = 0
Query:   24 QAPPSVSRGLQGAVLEVATGRGPSAPGKGLRGFSGTAADDGVRTAQHAWEKSCYFNIDYKIDENDTVHDAISRMSAYNVGCLIVTKN-GVVSGIISERDYVCKVSLLGRQSKDTKVKEICTQGQKMIVAKRSDTLETCVEKMITAGIRHLPVIDDDTGELFGLISVKDLVKEYIKDRDHLI 203
            QA P+ SR    A +  A     +AP    R FSG   +D V TA  AW+KSCY  +DY +++  TV+D + R++A+NVGCL+   N G ++G++SERDYVCK++LLG+ SKDT++KEI T+   +I A   D++E C++ M++  IRHLP++D  + ++ G+IS+KDLVK  + +++  I
Sbjct:    9 QALPAASRIGSAAAVRPAA----AAPRFTARTFSGPTVEDAV-TADDAWKKSCYVEMDYTVNDESTVYDFVQRLAAFNVGCLVTVDNDGNITGVVSERDYVCKIALLGKTSKDTRIKEISTKAANLITATPEDSVEDCMQMMLSKDIRHLPLLDSSSKKVVGIISIKDLVKTLLDEKEKAI 184          
BLAST of mRNA_A-nodosum_M_contig103.17.1 vs. uniprot
Match: A0A1Z5KQF6_FISSO (CBS domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQF6_FISSO)

HSP 1 Score: 157 bits (396), Expect = 5.610e-45
Identity = 81/149 (54.36%), Postives = 110/149 (73.83%), Query Frame = 0
Query:   56 FSGTAADDGVRTAQHAWEKSCYFNIDYKIDENDTVHDAISRMSAYNVGCLIVT-KNGVVSGIISERDYVCKVSLLGRQSKDTKVKEICTQGQKMIVAKRSDTLETCVEKMITAGIRHLPVIDDDTGELFGLISVKDLVKEYIKDRDHLI 203
             S T AD  V TA  A E S Y  I++KIDE+  V+DA+ R +A N+GCL+ T K G ++GIISERDY+CKV+LLGR SK+T ++EI T+G  +I AK ++T+ETC+EKM+T GIRHLPV+DD  G + GLIS+KDLVK  + +++  I
Sbjct:   23 MSATVAD--VSTADDALELSGYKEINFKIDEDAMVYDAVQRFAANNIGCLVTTDKAGNMTGIISERDYICKVALLGRTSKETPIREISTRGANIITAKGNETVETCMEKMMTKGIRHLPVVDD-AGSVTGLISIKDLVKTVVSEKEKTI 168          
BLAST of mRNA_A-nodosum_M_contig103.17.1 vs. uniprot
Match: B8C203_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C203_THAPS)

HSP 1 Score: 153 bits (387), Expect = 1.580e-43
Identity = 72/152 (47.37%), Postives = 108/152 (71.05%), Query Frame = 0
Query:   53 LRGFSGTAADDGVRTAQHAWEKSCYFNIDYKIDENDTVHDAISRMSAYNVGCLIVT-KNGVVSGIISERDYVCKVSLLGRQSKDTKVKEICTQGQKMIVAKRSDTLETCVEKMITAGIRHLPVIDDDTGELFGLISVKDLVKEYIKDRDHLI 203
            LRGF+ T  +    TA  AW KSCY  IDY + E+  V++A+ + +AYN+GCL+ T K+G +SG++SERDYVCKV+LLG+ SKD  +KEI T+   +I A  ++T+  C+ KM+   IRHLP++D+D G + G++S+KDLVK  +K+++  I
Sbjct:   27 LRGFAQTVKEG--LTATDAWNKSCYSEIDYTVSEDLPVYEAVQKFAAYNIGCLVTTDKDGKISGVVSERDYVCKVALLGKTSKDVSIKEISTKSANLITASPNETVSNCMAKMLMKDIRHLPLLDNDGG-VVGIVSIKDLVKSELKEKEEAI 175          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig103.17.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L450_9PHAE2.070e-8181.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXG6_ECTSI6.740e-6180.34CBS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835ZG49_9STRA1.040e-5961.11CBS domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S1XTH5_9STRA4.110e-5353.57Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S1U998_9STRA7.160e-5253.57Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A835YGF7_9STRA1.550e-5052.17Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7R9UAT3_9STRA1.380e-4956.03Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A6T9YKC1_9STRA3.200e-4543.09Hypothetical protein n=1 Tax=Asterionellopsis glac... [more]
A0A1Z5KQF6_FISSO5.610e-4554.36CBS domain-containing protein n=2 Tax=Fistulifera ... [more]
B8C203_THAPS1.580e-4347.37Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000644CBS domainSMARTSM00116cbs_1coord: 82..127
e-value: 0.76
score: 18.8
coord: 147..196
e-value: 3.7E-7
score: 39.8
IPR000644CBS domainPFAMPF00571CBScoord: 83..121
e-value: 4.8E-7
score: 30.1
coord: 138..194
e-value: 3.0E-9
score: 37.2
IPR000644CBS domainPROSITEPS51371CBScoord: 142..201
score: 11.938818
IPR046342CBS domain superfamilyGENE3D3.10.580.10coord: 68..208
e-value: 1.5E-33
score: 117.5
IPR046342CBS domain superfamilySUPERFAMILY54631CBS-domain paircoord: 84..200
NoneNo IPR availablePANTHERPTHR43080:SF2CBS DOMAIN-CONTAINING PROTEIN CBSX3, MITOCHONDRIALcoord: 84..195
NoneNo IPR availablePANTHERPTHR43080CBS DOMAIN-CONTAINING PROTEIN CBSX3, MITOCHONDRIALcoord: 84..195

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig103contigA-nodosum_M_contig103:193537..197036 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig103.17.1mRNA_A-nodosum_M_contig103.17.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig103 192935..197296 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig103.17.1 ID=prot_A-nodosum_M_contig103.17.1|Name=mRNA_A-nodosum_M_contig103.17.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=214bp
MIRNVVRTLGRAGATSLKTAQHSQAPPSVSRGLQGAVLEVATGRGPSAPG
KGLRGFSGTAADDGVRTAQHAWEKSCYFNIDYKIDENDTVHDAISRMSAY
NVGCLIVTKNGVVSGIISERDYVCKVSLLGRQSKDTKVKEICTQGQKMIV
AKRSDTLETCVEKMITAGIRHLPVIDDDTGELFGLISVKDLVKEYIKDRD
HLICKMLGLPTSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000644CBS_dom
IPR046342CBS_dom_sf