mRNA_A-nodosum_M_contig103.17.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig103.17.1 vs. uniprot
Match: A0A6H5L450_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L450_9PHAE) HSP 1 Score: 249 bits (636), Expect = 8.240e-78 Identity = 121/149 (81.21%), Postives = 133/149 (89.26%), Query Frame = 3
Query: 453 VRTAQHAWEKSCYFNIDYKIDENDTVHDAISRMSAYNVGCLIVTKNGVVSGIISERDYVCKVSLLGRQSKDTKVKEICTQGQKMIVAKRSDTLETCVEKMITAGIRHLPVIDDDTGELFGLISVKDLVKEYIKDRDHLICKMLGLPTSS 899
VRTAQHAWEKSCYFNIDYKIDE TV+DAISRMSAYNVGCLIVTKNGVVSGIISERDYVCK++LLG+ SKDT VKEICT+G KM+ A RSDT+E CV+KMI A +RHLPVIDDDTGE+FGLIS DLVKEY K+RD L+ KMLGLP SS
Sbjct: 4 VRTAQHAWEKSCYFNIDYKIDEASTVYDAISRMSAYNVGCLIVTKNGVVSGIISERDYVCKIALLGKSSKDTTVKEICTRGPKMVAAARSDTIEACVKKMIAADVRHLPVIDDDTGEVFGLIS--DLVKEYTKERDDLLMKMLGLPPSS 150
BLAST of mRNA_A-nodosum_M_contig103.17.1 vs. uniprot
Match: D7FXG6_ECTSI (CBS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXG6_ECTSI) HSP 1 Score: 196 bits (498), Expect = 1.050e-57 Identity = 94/117 (80.34%), Postives = 105/117 (89.74%), Query Frame = 3
Query: 549 MSAYNVGCLIVTKNGVVSGIISERDYVCKVSLLGRQSKDTKVKEICTQGQKMIVAKRSDTLETCVEKMITAGIRHLPVIDDDTGELFGLISVKDLVKEYIKDRDHLICKMLGLPTSS 899
MSAYNVGCLIVTKNGVVSGIISERDYVCK++LLG+ SKDT VKEICT+G KM+ A RSDT+E CV+KMI A +RHLPVIDDDTGE+FGLISVKDLVKEY K+RD L+ KMLGLP SS
Sbjct: 1 MSAYNVGCLIVTKNGVVSGIISERDYVCKIALLGKASKDTTVKEICTRGPKMVAAARSDTIEACVKKMIAADVRHLPVIDDDTGEVFGLISVKDLVKEYTKERDDLLMKMLGLPPSS 117
BLAST of mRNA_A-nodosum_M_contig103.17.1 vs. uniprot
Match: A0A835ZG49_9STRA (CBS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG49_9STRA) HSP 1 Score: 194 bits (494), Expect = 4.490e-56 Identity = 89/149 (59.73%), Postives = 118/149 (79.19%), Query Frame = 3
Query: 453 VRTAQHAWEKSCYFNIDYKIDENDTVHDAISRMSAYNVGCLIVTKNGVVSGIISERDYVCKVSLLGRQSKDTKVKEICTQGQKMIVAKRSDTLETCVEKMITAGIRHLPVIDDDTGELFGLISVKDLVKEYIKDRDHLICKMLGLPTSS 899
VRTAQHAWEKSCY+NIDY ID+ V+DA+ RM+A+NVGCL+VT+ G+I+ERDYVCKV+LLGR S++T +KE+ T + +V +RSD+++TCV+KMITA +RHLPV+ DD E+ GLISVKDLVKEY K++D L+ K+ G S
Sbjct: 44 VRTAQHAWEKSCYYNIDYMIDQESKVYDAVQRMAAFNVGCLVVTEQSKPVGVITERDYVCKVALLGRNSRETFIKEVATALK--VVVRRSDSIDTCVKKMITADVRHLPVLSDDNDEIIGLISVKDLVKEYTKEKDELLTKLFGGNLSG 190
BLAST of mRNA_A-nodosum_M_contig103.17.1 vs. uniprot
Match: A0A7S1XTH5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XTH5_9STRA) HSP 1 Score: 177 bits (449), Expect = 1.630e-49 Identity = 75/140 (53.57%), Postives = 113/140 (80.71%), Query Frame = 3
Query: 459 TAQHAWEKSCYFNIDYKIDENDTVHDAISRMSAYNVGCLIVTKNGVVSGIISERDYVCKVSLLGRQSKDTKVKEICTQGQKMIVAKRSDTLETCVEKMITAGIRHLPVIDDDTGELFGLISVKDLVKEYIKDRDHLICKM 878
TA AWEKSCYF ID+KI ++ +V++A+ + +AYN+GCL+V K V+GIISERDYV K++LLGR+S DTKV E+CT G M+VA+ +D+++ C+ KM+ IRHLPV++++TG++ G++SVKDL+KE +K++D +I K+
Sbjct: 34 TASTAWEKSCYFKIDFKISQDASVYEAVQKFAAYNIGCLVVMKGDEVAGIISERDYVTKIALLGRKSVDTKVSEVCTSGANMVVARTTDSVQECMGKMLARDIRHLPVVEEETGQVVGMLSVKDLIKELVKEKDEIITKL 173
BLAST of mRNA_A-nodosum_M_contig103.17.1 vs. uniprot
Match: A0A7S1U998_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U998_9STRA) HSP 1 Score: 177 bits (449), Expect = 2.840e-48 Identity = 75/140 (53.57%), Postives = 113/140 (80.71%), Query Frame = 3
Query: 459 TAQHAWEKSCYFNIDYKIDENDTVHDAISRMSAYNVGCLIVTKNGVVSGIISERDYVCKVSLLGRQSKDTKVKEICTQGQKMIVAKRSDTLETCVEKMITAGIRHLPVIDDDTGELFGLISVKDLVKEYIKDRDHLICKM 878
TA AWEKSCYF ID+KI ++ +V++A+ + +AYN+GCL+V K V+GIISERDYV K++LLGR+S DTKV E+CT G M+VA+ +D+++ C+ KM+ IRHLPV++++TG++ G++SVKDL+KE +K++D +I K+
Sbjct: 130 TASTAWEKSCYFKIDFKISQDASVYEAVQKFAAYNIGCLVVMKGDEVAGIISERDYVTKIALLGRKSVDTKVSEVCTSGANMVVARTTDSVQECMGKMLARDIRHLPVVEEETGQVVGMLSVKDLIKELVKEKDEIITKL 269
BLAST of mRNA_A-nodosum_M_contig103.17.1 vs. uniprot
Match: A0A835YGF7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGF7_9STRA) HSP 1 Score: 171 bits (434), Expect = 5.200e-47 Identity = 84/161 (52.17%), Postives = 120/161 (74.53%), Query Frame = 3
Query: 399 SAPGKGLRGFSGTAADDGVRTAQHAWEKSCYFNIDYKIDENDTVHDAISRMSAYNVGCLIVT-KNGVVSGIISERDYVCKVSLLGRQSKDTKVKEICTQGQKMIVAKRSDTLETCVEKMITAGIRHLPVIDDDTGELFGLISVKDLVKEYIKDRDHLICKM 878
S PG G + + ++ + +A+ A EKSCYF ID+KIDE+ TV++A+ R +AYN+G L VT K G V GIISERDYVCK++LLGRQS+ TKVKE+ T G +IVAK+SD+L C+ KM+ IRHLPV+D+++G + G++S+KDL+KE +++ LI K+
Sbjct: 37 SEPGSHSYGETPSTVNE-LSSARSALEKSCYFKIDFKIDEDATVYEAVQRFAAYNIGALAVTDKGGKVVGIISERDYVCKIALLGRQSQTTKVKEVATMGANIIVAKKSDSLHDCMRKMLARDIRHLPVLDEESGTVVGMLSIKDLIKEVAHEKEALIAKL 196
BLAST of mRNA_A-nodosum_M_contig103.17.1 vs. uniprot
Match: A0A7R9UAT3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAT3_9STRA) HSP 1 Score: 169 bits (429), Expect = 4.390e-46 Identity = 79/141 (56.03%), Postives = 111/141 (78.72%), Query Frame = 3
Query: 459 TAQHAWEKSCYFNIDYKIDENDTVHDAISRMSAYNVGCLIV-TKNGVVSGIISERDYVCKVSLLGRQSKDTKVKEICTQGQKMIVAKRSDTLETCVEKMITAGIRHLPVIDDDTGELFGLISVKDLVKEYIKDRDHLICKM 878
TA +AWEKSCYF ID+KIDE+ +V++A+ R +AYN+GCL+V +K G V+GIISERDYV KV+LLGR+S D KV EICT M+VA SD+++ C+ M+ IRHLPV+ +D G++ G++SVKDL+KE +K++D +I K+
Sbjct: 72 TASNAWEKSCYFKIDFKIDEDASVYEAVQRFAAYNIGCLVVVSKEGKVAGIISERDYVTKVALLGRKSVDVKVSEICTSEANMVVANTSDSVQDCMGMMLARDIRHLPVVGED-GDVVGMLSVKDLIKELVKEKDEMISKL 211
BLAST of mRNA_A-nodosum_M_contig103.17.1 vs. uniprot
Match: A0A6T9YKC1_9STRA (Hypothetical protein n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A6T9YKC1_9STRA) HSP 1 Score: 157 bits (398), Expect = 6.960e-42 Identity = 78/181 (43.09%), Postives = 121/181 (66.85%), Query Frame = 3
Query: 330 QAPPSVSRGLQGAVLEVATGRGPSAPGKGLRGFSGTAADDGVRTAQHAWEKSCYFNIDYKIDENDTVHDAISRMSAYNVGCLIVTKN-GVVSGIISERDYVCKVSLLGRQSKDTKVKEICTQGQKMIVAKRSDTLETCVEKMITAGIRHLPVIDDDTGELFGLISVKDLVKEYIKDRDHLI 869
QA P+ SR A + A +AP R FSG +D V TA AW+KSCY +DY +++ TV+D + R++A+NVGCL+ N G ++G++SERDYVCK++LLG+ SKDT++KEI T+ +I A D++E C++ M++ IRHLP++D + ++ G+IS+KDLVK + +++ I
Sbjct: 9 QALPAASRIGSAAAVRPAA----AAPRFTARTFSGPTVEDAV-TADDAWKKSCYVEMDYTVNDESTVYDFVQRLAAFNVGCLVTVDNDGNITGVVSERDYVCKIALLGKTSKDTRIKEISTKAANLITATPEDSVEDCMQMMLSKDIRHLPLLDSSSKKVVGIISIKDLVKTLLDEKEKAI 184
BLAST of mRNA_A-nodosum_M_contig103.17.1 vs. uniprot
Match: A0A1Z5KQF6_FISSO (CBS domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQF6_FISSO) HSP 1 Score: 156 bits (395), Expect = 1.170e-41 Identity = 81/149 (54.36%), Postives = 110/149 (73.83%), Query Frame = 3
Query: 426 FSGTAADDGVRTAQHAWEKSCYFNIDYKIDENDTVHDAISRMSAYNVGCLIVT-KNGVVSGIISERDYVCKVSLLGRQSKDTKVKEICTQGQKMIVAKRSDTLETCVEKMITAGIRHLPVIDDDTGELFGLISVKDLVKEYIKDRDHLI 869
S T AD V TA A E S Y I++KIDE+ V+DA+ R +A N+GCL+ T K G ++GIISERDY+CKV+LLGR SK+T ++EI T+G +I AK ++T+ETC+EKM+T GIRHLPV+DD G + GLIS+KDLVK + +++ I
Sbjct: 23 MSATVAD--VSTADDALELSGYKEINFKIDEDAMVYDAVQRFAANNIGCLVTTDKAGNMTGIISERDYICKVALLGRTSKETPIREISTRGANIITAKGNETVETCMEKMMTKGIRHLPVVDD-AGSVTGLISIKDLVKTVVSEKEKTI 168
BLAST of mRNA_A-nodosum_M_contig103.17.1 vs. uniprot
Match: A0A6C0DQH1_9ZZZZ (CBS domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0DQH1_9ZZZZ) HSP 1 Score: 152 bits (385), Expect = 2.100e-40 Identity = 71/148 (47.97%), Postives = 102/148 (68.92%), Query Frame = 3
Query: 459 TAQHAWEKSCYFNIDYKIDENDTVHDAISRMSAYNVGCLIVT-KNGVVSGIISERDYVCKVSLLGRQSKDTKVKEICTQGQKMIVAKRSDTLETCVEKMITAGIRHLPVIDDDTGELFGLISVKDLVKEYIKDRDHLICKMLGLPTSS 899
+A A++ SCY ID+KI E++ ++A+ R SA+N+GCL VT K V G++SERDY+ KVS LG+ K KVKEICT +I+AK+ DT+E C+ KM+ IRHL VID+ E G+IS+KDL+KE +KD++ +I ++ L T
Sbjct: 16 SALSAFKNSCYHKIDFKISEDNNANNAVQRFSAFNIGCLAVTDKENNVVGVLSERDYINKVSALGKDDKTVKVKEICTYKPNLIIAKKGDTIEQCMNKMLVKDIRHLLVIDESNNEFIGMISIKDLIKEIMKDKNDIITRLTDLTTGK 163 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig103.17.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig103.17.1 >prot_A-nodosum_M_contig103.17.1 ID=prot_A-nodosum_M_contig103.17.1|Name=mRNA_A-nodosum_M_contig103.17.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=214bp MIRNVVRTLGRAGATSLKTAQHSQAPPSVSRGLQGAVLEVATGRGPSAPGback to top mRNA from alignment at A-nodosum_M_contig103:192935..197296- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig103.17.1 ID=mRNA_A-nodosum_M_contig103.17.1|Name=mRNA_A-nodosum_M_contig103.17.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=4362bp|location=Sequence derived from alignment at A-nodosum_M_contig103:192935..197296- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig103:192935..197296- >mRNA_A-nodosum_M_contig103.17.1 ID=mRNA_A-nodosum_M_contig103.17.1|Name=mRNA_A-nodosum_M_contig103.17.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=642bp|location=Sequence derived from alignment at A-nodosum_M_contig103:192935..197296- (Ascophyllum nodosum dioecious)back to top |