prot_A-nodosum_M_contig1029.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1029.1.1
Unique Nameprot_A-nodosum_M_contig1029.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length122
Homology
BLAST of mRNA_A-nodosum_M_contig1029.1.1 vs. uniprot
Match: A0A8H6Y342_9AGAR (Transcription factor n=1 Tax=Mycena sanguinolenta TaxID=230812 RepID=A0A8H6Y342_9AGAR)

HSP 1 Score: 122 bits (305), Expect = 1.760e-31
Identity = 60/122 (49.18%), Postives = 83/122 (68.03%), Query Frame = 0
Query:    1 MRKFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPTHKKAVMKIFQYLLHTKEWGIRYGGQGCGLCMKAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQELTASGTSEAEYV 122
            M++ PYREAVG+LMW A  TRPDIA  V  ++++  NPGPTH +AV ++F+YL  TK+W + YG    GL  + Y+D+D G   + RR++SG   ++  GAISW S+ QEL    T+EAEYV
Sbjct:   72 MKRIPYREAVGSLMWAAVGTRPDIAFVVGVLSKYLNNPGPTHWEAVKRVFRYLQGTKDWRLTYGAGKAGL--EGYSDAD-GMSQENRRAISGYAFIIDGGAISWSSKKQELVTLSTTEAEYV 190          
BLAST of mRNA_A-nodosum_M_contig1029.1.1 vs. uniprot
Match: UPI001E1BCD31 (secreted RxLR effector protein 161-like n=1 Tax=Daphnia magna TaxID=35525 RepID=UPI001E1BCD31)

HSP 1 Score: 119 bits (299), Expect = 6.100e-31
Identity = 61/122 (50.00%), Postives = 84/122 (68.85%), Query Frame = 0
Query:    1 MRKFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPTHKKAVMKIFQYLLHTKEWGIRYGGQGCGLCMKAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQELTASGTSEAEYV 122
            M+  PY+EAVGAL++ +T TRPDI+ AV  VA+F +NPG  H KAV +I +Y+  T+ +GI Y  Q  G  +  YTD+D+G  LD R S SG VL+ + G+ISW SR QE T+  T+E+E+V
Sbjct:   32 MKNIPYKEAVGALLYLSTTTRPDISYAVGQVAKFSQNPGIQHWKAVKRIIRYIAGTRTYGILYS-QEKGEMVTGYTDADYGGDLDDRTSTSGCVLLCSSGSISWFSRKQECTSLSTTESEFV 152          
BLAST of mRNA_A-nodosum_M_contig1029.1.1 vs. uniprot
Match: A0A438CHZ0_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438CHZ0_VITVI)

HSP 1 Score: 113 bits (283), Expect = 7.280e-29
Identity = 60/122 (49.18%), Postives = 80/122 (65.57%), Query Frame = 0
Query:    1 MRKFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPTHKKAVMKIFQYLLHTKEWGIRYGGQGCGLCMKAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQELTASGTSEAEYV 122
            M+K PY  AVG+LM+  T TRPDI+ AV  + R+  +PG  H KA  K+ +YL  TK++ + Y  +   L +  Y+DSD+G CLD+ +S SG V MLA GAISW S  Q +TAS T EAE+V
Sbjct:    1 MKKIPYASAVGSLMYAQTCTRPDISFAVGMLGRYQSDPGFEHWKAAKKVMRYLQGTKDYMLTYK-RSEQLEVVGYSDSDYGGCLDSLKSTSGFVFMLANGAISWKSEKQSITASSTMEAEFV 121          
BLAST of mRNA_A-nodosum_M_contig1029.1.1 vs. uniprot
Match: UPI001C9BC1AB (secreted RxLR effector protein 161-like n=1 Tax=Venturia canescens TaxID=32260 RepID=UPI001C9BC1AB)

HSP 1 Score: 114 bits (284), Expect = 9.450e-29
Identity = 58/122 (47.54%), Postives = 79/122 (64.75%), Query Frame = 0
Query:    1 MRKFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPTHKKAVMKIFQYLLHTKEWGIRYGGQGCGLCMKAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQELTASGTSEAEYV 122
            M++ PYREAVG LM+ A +TRPDI  AV  V+RF  NPG  H KAV +I +Y+  TK  GI+Y G    +   AY+D+DF   +DTRRS +G + ++A G + W S  Q+  +  T+EAEYV
Sbjct:   32 MQEMPYREAVGCLMFAAILTRPDIMYAVSQVSRFLNNPGKEHWKAVKRILRYIQGTKYMGIKYSGSH--IDFTAYSDADFAGDVDTRRSTTGYITLMAGGPVIWSSHRQKCISRSTTEAEYV 151          
BLAST of mRNA_A-nodosum_M_contig1029.1.1 vs. uniprot
Match: A0A2I0WQL2_9ASPA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0WQL2_9ASPA)

HSP 1 Score: 110 bits (276), Expect = 9.580e-29
Identity = 59/122 (48.36%), Postives = 77/122 (63.11%), Query Frame = 0
Query:    1 MRKFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPTHKKAVMKIFQYLLHTKEWGIRYGGQGCGLCMKAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQELTASGTSEAEYV 122
            M K PY  AVG+LM+    TRPDIA  V  + R+  NPG  H KAV ++ +YL  T+++ + Y  +   L +  Y+DSDF  CLD+RRS SG + MLA GAISW S  Q L AS T EAE++
Sbjct:    1 MDKIPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWKAVKRVMRYLKRTRDFMLTYQ-RSDHLEIVGYSDSDFAGCLDSRRSTSGYIFMLAGGAISWKSVKQTLIASSTMEAEFI 121          
BLAST of mRNA_A-nodosum_M_contig1029.1.1 vs. uniprot
Match: A0A5B7BVE6_DAVIN (Uncharacterized protein (Fragment) n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B7BVE6_DAVIN)

HSP 1 Score: 112 bits (280), Expect = 1.390e-28
Identity = 60/122 (49.18%), Postives = 78/122 (63.93%), Query Frame = 0
Query:    1 MRKFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPTHKKAVMKIFQYLLHTKEWGIRYGGQGCGLCMKAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQELTASGTSEAEYV 122
            M+  PY  AVG+LM+  T TRPDI+ AV  + RF  NPG  H KA  K+ +YL  TK++ + Y  +   L +  Y+DSDF  CLD+R+S SG V +LA GAISW S  Q + AS T EAE+V
Sbjct:   49 MKDIPYASAVGSLMYAQTCTRPDISFAVGMLGRFQSNPGMEHWKAAKKVMRYLQGTKDYMLTYR-RSDQLDVIGYSDSDFAGCLDSRKSTSGFVFLLASGAISWKSVKQSIIASSTMEAEFV 169          
BLAST of mRNA_A-nodosum_M_contig1029.1.1 vs. uniprot
Match: A0A4S4K468_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A4S4K468_9APHY)

HSP 1 Score: 116 bits (290), Expect = 3.490e-28
Identity = 60/122 (49.18%), Postives = 85/122 (69.67%), Query Frame = 0
Query:    1 MRKFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPTHKKAVMKIFQYLLHTKEWGIRYGGQGCGLCMKAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQELTASGTSEAEYV 122
            MRK PYREA+G+LM+ A  TRPDI+ A+  +A+F +NPG TH +AV ++F+YLL TK   ++YGG   GL  + Y D+D GA  + R +++G V ++  GA+SW S+ QEL    T+EAEYV
Sbjct:  242 MRKIPYREAIGSLMYAAVGTRPDISFAISTLAQFSQNPGWTHWEAVKRVFRYLLGTKNLVLQYGGVQRGL--EGYVDAD-GASQEHRHAITGYVFLVDGGAVSWSSKKQELVTLSTTEAEYV 360          
BLAST of mRNA_A-nodosum_M_contig1029.1.1 vs. uniprot
Match: A0A445FBE9_GLYSO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Glycine soja TaxID=3848 RepID=A0A445FBE9_GLYSO)

HSP 1 Score: 117 bits (292), Expect = 5.520e-28
Identity = 60/122 (49.18%), Postives = 78/122 (63.93%), Query Frame = 0
Query:    1 MRKFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPTHKKAVMKIFQYLLHTKEWGIRYGGQGCGLCMKAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQELTASGTSEAEYV 122
            M+  PY  AVG+LM+    TRPDIA AV  + R+  NPG  H KA  K+ +YL  TK++ + Y    C L +  Y+DSDF  C+D+RRS SG + MLA GA+SW S  Q LTA+ T EAE+V
Sbjct: 1340 MKNIPYASAVGSLMYAQVCTRPDIAFAVGVLGRYQSNPGIDHWKAAKKVMRYLQGTKDYMLMYRQTDC-LEVIGYSDSDFAGCVDSRRSTSGYIFMLASGAVSWRSAKQTLTATSTMEAEFV 1460          
BLAST of mRNA_A-nodosum_M_contig1029.1.1 vs. uniprot
Match: A0A445FAJ6_GLYSO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Glycine soja TaxID=3848 RepID=A0A445FAJ6_GLYSO)

HSP 1 Score: 117 bits (292), Expect = 5.600e-28
Identity = 60/122 (49.18%), Postives = 78/122 (63.93%), Query Frame = 0
Query:    1 MRKFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPTHKKAVMKIFQYLLHTKEWGIRYGGQGCGLCMKAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQELTASGTSEAEYV 122
            M+  PY  AVG+LM+    TRPDIA AV  + R+  NPG  H KA  K+ +YL  TK++ + Y    C L +  Y+DSDF  C+D+RRS SG + MLA GA+SW S  Q LTA+ T EAE+V
Sbjct: 2114 MKNIPYASAVGSLMYAQVCTRPDIAFAVGVLGRYQSNPGIDHWKAAKKVMRYLQGTKDYMLMYRQTDC-LEVIGYSDSDFAGCVDSRRSTSGYIFMLASGAVSWRSAKQTLTATSTMEAEFV 2234          
BLAST of mRNA_A-nodosum_M_contig1029.1.1 vs. uniprot
Match: A0A438J4D7_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Vitis vinifera TaxID=29760 RepID=A0A438J4D7_VITVI)

HSP 1 Score: 111 bits (277), Expect = 6.330e-28
Identity = 57/122 (46.72%), Postives = 76/122 (62.30%), Query Frame = 0
Query:    1 MRKFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPTHKKAVMKIFQYLLHTKEWGIRYGGQGCGLCMKAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQELTASGTSEAEYV 122
            M +FPY  AVG+LM+    TRPDIA  V  + R+  NPG  H K   ++ +YL  TK++ + Y  +   L +  Y+DSDF  CLD+RRS SG + MLA GA+SW S  Q L AS T EAE++
Sbjct:    1 MERFPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWKKAKRVMRYLQRTKDYMLTYR-RSSHLEIVGYSDSDFAGCLDSRRSTSGYIFMLAGGAVSWKSVKQTLIASSTMEAEFI 121          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1029.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8H6Y342_9AGAR1.760e-3149.18Transcription factor n=1 Tax=Mycena sanguinolenta ... [more]
UPI001E1BCD316.100e-3150.00secreted RxLR effector protein 161-like n=1 Tax=Da... [more]
A0A438CHZ0_VITVI7.280e-2949.18Retrovirus-related Pol polyprotein from transposon... [more]
UPI001C9BC1AB9.450e-2947.54secreted RxLR effector protein 161-like n=1 Tax=Ve... [more]
A0A2I0WQL2_9ASPA9.580e-2948.36Retrovirus-related Pol polyprotein from transposon... [more]
A0A5B7BVE6_DAVIN1.390e-2849.18Uncharacterized protein (Fragment) n=1 Tax=Davidia... [more]
A0A4S4K468_9APHY3.490e-2849.18Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A445FBE9_GLYSO5.520e-2849.18Retrovirus-related Pol polyprotein from transposon... [more]
A0A445FAJ6_GLYSO5.600e-2849.18Retrovirus-related Pol polyprotein from transposon... [more]
A0A438J4D7_VITVI6.330e-2846.72Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 10..94
NoneNo IPR availablePANTHERPTHR11439:SF308SUBFAMILY NOT NAMEDcoord: 10..94
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 73..122
e-value: 4.74659E-20
score: 77.5085

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1029contigA-nodosum_M_contig1029:154492..154857 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1029.1.1mRNA_A-nodosum_M_contig1029.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1029 154492..154881 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1029.1.1 ID=prot_A-nodosum_M_contig1029.1.1|Name=mRNA_A-nodosum_M_contig1029.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=122bp
MRKFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPTHKKAVMKIF
QYLLHTKEWGIRYGGQGCGLCMKAYTDSDFGACLDTRRSVSGAVLMLAKG
AISWHSRMQELTASGTSEAEYV
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