prot_A-nodosum_M_contig10273.10.1 (polypeptide) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig10273.10.1 vs. uniprot
Match: A0A6H5KJ16_9PHAE (DNA-directed RNA polymerase subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ16_9PHAE) HSP 1 Score: 94.7 bits (234), Expect = 5.640e-21 Identity = 47/64 (73.44%), Postives = 52/64 (81.25%), Query Frame = 0
Query: 1 MTFGGGYRAMNRAGMVDFSSPCLQMSFETTAGFLTRAAVAGQSDKLKSPSASIVMGHVGALGPG 64
MTF GGYR +NRAGM DFSSPCLQMSFETT F+ +AAVA SD+LKSPSA IVMG VG+ G G
Sbjct: 1797 MTFDGGYRPLNRAGMADFSSPCLQMSFETTTDFMAKAAVARSSDRLKSPSARIVMGRVGSFGTG 1860
BLAST of mRNA_A-nodosum_M_contig10273.10.1 vs. uniprot
Match: D7FNY3_ECTSI (DNA-directed RNA polymerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNY3_ECTSI) HSP 1 Score: 93.6 bits (231), Expect = 1.400e-20 Identity = 47/64 (73.44%), Postives = 51/64 (79.69%), Query Frame = 0
Query: 1 MTFGGGYRAMNRAGMVDFSSPCLQMSFETTAGFLTRAAVAGQSDKLKSPSASIVMGHVGALGPG 64
MTF GGYR +NRAGM DFSSPCLQMSFETT F+ +AAVA SD+LKSPSA IVMG VG G G
Sbjct: 568 MTFDGGYRPLNRAGMADFSSPCLQMSFETTTDFMAKAAVARSSDRLKSPSARIVMGRVGNFGTG 631
BLAST of mRNA_A-nodosum_M_contig10273.10.1 vs. uniprot
Match: A0A836C8M0_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8M0_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 8.800e-17 Identity = 44/64 (68.75%), Postives = 49/64 (76.56%), Query Frame = 0
Query: 1 MTFGGGYRAMNRAGMVDFSSPCLQMSFETTAGFLTRAAVAGQSDKLKSPSASIVMGHVGALGPG 64
MTF GGYRAMNR GM D +SP LQMSFETTA FL +AA+ + +KLKSPSA IVMG VG G G
Sbjct: 1588 MTFYGGYRAMNRIGMKDIASPFLQMSFETTASFLVQAALDSKVEKLKSPSARIVMGQVGDFGTG 1651
BLAST of mRNA_A-nodosum_M_contig10273.10.1 vs. uniprot
Match: A0A7R9ZT77_9STRA (DNA-directed RNA polymerase n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZT77_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 2.290e-16 Identity = 42/64 (65.62%), Postives = 49/64 (76.56%), Query Frame = 0
Query: 1 MTFGGGYRAMNRAGMVDFSSPCLQMSFETTAGFLTRAAVAGQSDKLKSPSASIVMGHVGALGPG 64
MT+ GGY AMNR GM D SSP LQMSFETTA FLT+AA++G D+LKSPSA+IV+G G G
Sbjct: 77 MTYSGGYTAMNRIGMKDTSSPFLQMSFETTATFLTQAALSGTCDQLKSPSANIVVGRPIRHGTG 140
BLAST of mRNA_A-nodosum_M_contig10273.10.1 vs. uniprot
Match: A0A7S2G4R6_9STRA (DNA-directed RNA polymerase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G4R6_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 4.660e-15 Identity = 42/65 (64.62%), Postives = 47/65 (72.31%), Query Frame = 0
Query: 1 MTFGGGYRAMNRAGMVD-FSSPCLQMSFETTAGFLTRAAVAGQSDKLKSPSASIVMGHVGALGPG 64
MTF GGYRA NR G+ + SSP LQMSFETTA FLT AAV G D+L+SPSA IVMG + G G
Sbjct: 114 MTFSGGYRAFNRLGIAEGSSSPYLQMSFETTATFLTEAAVRGDPDRLQSPSARIVMGQLAKQGTG 178
BLAST of mRNA_A-nodosum_M_contig10273.10.1 vs. uniprot
Match: A0A7S1GNJ0_CYCTE (DNA-directed RNA polymerase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GNJ0_CYCTE) HSP 1 Score: 72.4 bits (176), Expect = 2.470e-14 Identity = 38/64 (59.38%), Postives = 47/64 (73.44%), Query Frame = 0
Query: 1 MTFGGGYRAMNRAGMVDFSSPCLQMSFETTAGFLTRAAVAGQSDKLKSPSASIVMGHVGALGPG 64
MTF GG++AMNR GM D SSP LQMSFETTA F+T AA+ ++ L+SPSA+IV+G G G
Sbjct: 83 MTFDGGFKAMNRNGMNDISSPFLQMSFETTANFMTEAAMKASTEPLRSPSANIVVGRPVRHGTG 146
BLAST of mRNA_A-nodosum_M_contig10273.10.1 vs. uniprot
Match: A0A8J2WSH6_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WSH6_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 6.140e-14 Identity = 41/62 (66.13%), Postives = 46/62 (74.19%), Query Frame = 0
Query: 1 MTFGGGYRAMNRAGMVDFSSPCLQMSFETTAGFLTRAAVAGQSDKLKSPSASIVMGHVGALG 62
MT GGGYRAMNR M+D SSP LQMSFETTA FLT AA + D L+SPSASIV+G +G
Sbjct: 1544 MTAGGGYRAMNRGAMMDHSSPYLQMSFETTASFLTSAAQSSAVDTLQSPSASIVVGQPVKVG 1605
BLAST of mRNA_A-nodosum_M_contig10273.10.1 vs. uniprot
Match: A0A7S0PVI6_9STRA (DNA-directed RNA polymerase n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0PVI6_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 9.050e-14 Identity = 38/64 (59.38%), Postives = 48/64 (75.00%), Query Frame = 0
Query: 1 MTFGGGYRAMNRAGMVDFSSPCLQMSFETTAGFLTRAAVAGQSDKLKSPSASIVMGHVGALGPG 64
MT+ GG++AMNR GM + SS LQMSFETTA F+T AA+AG+ + LKSPSA+IV+G G G
Sbjct: 178 MTYEGGFKAMNRGGMEEISSAFLQMSFETTAAFMTNAALAGRKEYLKSPSANIVLGQPMKHGTG 241
BLAST of mRNA_A-nodosum_M_contig10273.10.1 vs. uniprot
Match: A0A1E7FJU9_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FJU9_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 2.140e-13 Identity = 40/64 (62.50%), Postives = 46/64 (71.88%), Query Frame = 0
Query: 1 MTFGGGYRAMNRAGMVDFSSPCLQMSFETTAGFLTRAAVAGQSDKLKSPSASIVMGHVGALGPG 64
MTFGG Y AMNR GM SSP LQMSFETTA FLT+AA+ G SD++ SPS++IV G G G
Sbjct: 1605 MTFGGDYTAMNRNGMQTMSSPFLQMSFETTAQFLTQAALTGSSDEMNSPSSNIVAGRPIRHGTG 1668
BLAST of mRNA_A-nodosum_M_contig10273.10.1 vs. uniprot
Match: A0A2H9TQD1_9FUNG (DNA-directed RNA polymerase subunit n=1 Tax=Paramicrosporidium saccamoebae TaxID=1246581 RepID=A0A2H9TQD1_9FUNG) HSP 1 Score: 72.4 bits (176), Expect = 3.990e-13 Identity = 40/64 (62.50%), Postives = 45/64 (70.31%), Query Frame = 0
Query: 1 MTFGGGYRAMNRAGMVDFSSPCLQMSFETTAGFLTRAAVAGQSDKLKSPSASIVMGHVGALGPG 64
MT GGGYR NR GM SP LQM+FETT GFL +AA+ G+ D LKSPS+ IVMG ALG G
Sbjct: 1533 MTCGGGYRPFNRMGMSTAPSPLLQMTFETTLGFLRQAALVGEWDDLKSPSSRIVMGLPVALGTG 1596 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10273.10.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_A-nodosum_M_contig10273.10.1 ID=prot_A-nodosum_M_contig10273.10.1|Name=mRNA_A-nodosum_M_contig10273.10.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=75bpback to top |