prot_A-nodosum_M_contig1027.3.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1027.3.1
Unique Nameprot_A-nodosum_M_contig1027.3.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length307
Homology
BLAST of mRNA_A-nodosum_M_contig1027.3.1 vs. uniprot
Match: D7G4B4_ECTSI (Ubiquitin-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4B4_ECTSI)

HSP 1 Score: 264 bits (675), Expect = 3.590e-82
Identity = 138/290 (47.59%), Postives = 181/290 (62.41%), Query Frame = 0
Query:   11 MTGRHMLLRVEEDMSMGKIFETFAACNELPAKDLRFWLNGETIPLAETPRTLGLQDGAEIRVILRLTGGKPVILLYPPTQLEASVHLELSSDWSFSVLYPKPLLRGPPRSDDTLSTFQVRCSKEGSESETCVWRVRASPDGSLMDLETGKDYPYLFWEAQSKDGRLAQKFKLEETPSFCVPGVQAGEFLDDALTRLGLSVRERCDMITYWLPQLEAYPFNVIYFVDVQHYGQTAKLQIFPGPDVVIRVFMAFRGTNTYEAREVCAELSNLQAPAREGFVAVEWGGMNLNG 300
            +TG+   +R     ++  + +       +P +  R    G+      T R   +++G+   ++L L   KPVILLYPP  ++ +V +ELS  WSFS LYPK     P       + ++       +  + C W V ASP GSL DL TG++YPYLFWEA S DGR+ + F L+ + SFCV G  AG FLD AL RLGL+VRERCDM+T WLPQLE+  FNVIYFV+V+ Y Q A+L I P PDV IRVFMAFRG + Y+A    A++  L++PAREGFVAVEWGGMNLNG
Sbjct:  165 LTGKQHTIRAFPSETVLDVKKKVQDTQGIPCEQQRIIYAGQQTSDDRTLRDCNIRNGSVAHLVLSLR--KPVILLYPPAPVDITVAVELSPLWSFSSLYPK---LQPRNLKQLAADYEAGSQANVAGGQQCKWNVHASPGGSLKDLSTGREYPYLFWEADSSDGRVTRSFGLDGSRSFCVAGEAAGVFLDVALERLGLNVRERCDMVTCWLPQLESSRFNVIYFVEVERYEQAARLTIVPTPDVTIRVFMAFRGAHAYDAELDTAKIEELRSPAREGFVAVEWGGMNLNG 449          
BLAST of mRNA_A-nodosum_M_contig1027.3.1 vs. uniprot
Match: A0A8H4VHY2_9AGAR (Ubiquitin-like domain-containing protein n=1 Tax=Agrocybe pediades TaxID=84607 RepID=A0A8H4VHY2_9AGAR)

HSP 1 Score: 153 bits (387), Expect = 2.630e-40
Identity = 107/333 (32.13%), Postives = 146/333 (43.84%), Query Frame = 0
Query:    4 ITVIFTFMTGRHMLLRVEEDMSMGKIFETFAACNELPA--KDLRFWLNGETIPLAETPRTLGLQDGAEIRVILRLTGGKPVILLYPPTQLEASVHLELSSDWSFSVLYPKPLLRGPPRSDDTLSTFQVRCSKEGSESETCVWRVRASPDGSLMDLETGKDYPYLFWEAQSKDGRLAQKFK----------------LEETPSFCVPGVQAGEFLDDALTRLGLSVRERCDMITYWLPQLEAYPFNVIYFVDVQHYGQTAKLQIFPGPDVVIRVFMAFRGTNTYEAREVCAELSNLQAPAREG--------------------FVAVEWGGMNL 298
            I V  T++    ++ +V+E + + K+ + F  C  +    ++ RF   G  I   +T  ++GLQDG EI V  R  GGKPVI L+ P  +EASV L L+  W FS +YP   +  P                E +  +   WRV+   +G L +L TG D  YLFWEA +  G  A K                  L +  S  +P  +   +LD AL  LGL    R   ITYWLP +  +      FV    Y Q A L + P PDVV RVFM F+G    E     ++ +N  A  RE                     F  VEWGGM +
Sbjct:   50 IRVTVTYL-DHSVVFKVKEHVVLSKVMKAF--CKRIGGCEQEYRFSYYGNVIMRYDTSASIGLQDGDEIIVQPRQVGGKPVIYLFSPLPVEASVKLALAPQWDFSAIYPVVSIEKP--------------GVEQAHHQEVTWRVQTQSNGDLKELNTGLDVAYLFWEAHTNPGSAAPKVSNAREGSIEAFNPNAALLNDDNSVVLPVSKVTPYLDQALHALGLHTEARTSFITYWLPSILKHTNIAFRFVPQASYEQAAPLTVSPAPDVVSRVFMVFQGVTDEEV----SQWANATAKVREDVSFWQTVVGIDRERTLDASLFRVVEWGGMEV 361          
BLAST of mRNA_A-nodosum_M_contig1027.3.1 vs. uniprot
Match: A0A7X5D8X7_9CLOT (Uncharacterized protein n=2 Tax=Bacteria TaxID=2 RepID=A0A7X5D8X7_9CLOT)

HSP 1 Score: 137 bits (345), Expect = 5.010e-36
Identity = 84/220 (38.18%), Postives = 114/220 (51.82%), Query Frame = 0
Query:   80 KPVILLYPPTQLEASVHLELSSDWSFSVLYPKPLLRGPPRSDDTLSTFQVRCSKEGSESETCVWRVRASPDGSLMDLETGKDYPYLFWEAQSKDGRLAQKFKLEETPSFCVPGVQAGEFLDDALTRLGLSVRERCDMITYWLPQLEAYPFNVIYFVDVQHYGQTAKLQIFPGPDVVIRVFMAFRGTNTYEAREVCAELSNLQAPAREGFVAVEWGGMNLN 299
            KPVI LYP       V LEL    +  + YP              +  + R + EGS      W+V+A PDG+L DL  G++Y YLFWE           ++ +    FC+ G    EFL+DAL +LGL+ +E  D ITYWLPQ++  P+N+I F     Y +TA+L + P PD +IRVFMA+   +      V  E   L A  REGF  VEWGG  ++
Sbjct:    5 KPVIYLYPKEPCVVEVALELEG--TVGMAYP--------------AFNEERSASEGS------WKVQADPDGTLSDLRVGREYGYLFWEGVGD-------WEPDFDRGFCIAGADTAEFLEDALRQLGLTDKEADDFITYWLPQMQGNPYNLIAFQGGA-YDRTARLTVDPQPDTIIRVFMAWMRLD----EPVVVEPQVLSAAPREGFAVVEWGGGEVS 190          
BLAST of mRNA_A-nodosum_M_contig1027.3.1 vs. uniprot
Match: A0A8H6WWT2_9AGAR (Ubiquitin family protein n=2 Tax=Mycena kentingensis (nom. inval.) TaxID=1325293 RepID=A0A8H6WWT2_9AGAR)

HSP 1 Score: 141 bits (355), Expect = 5.900e-35
Identity = 98/325 (30.15%), Postives = 136/325 (41.85%), Query Frame = 0
Query:   11 MTGRHMLLRVEEDMSMGKIFETFAACNELPAKDLRFWLNGETIPLAETPRTLGLQDGAEIRVILRLTGGKPVILLYPPTQLEASVHLELSSDWSFSVLYPKPLLRGPPRSDDTLSTFQVRCSKEGSESETCVWRVRASPDGSLMDLETGKDYPYLFWEAQS--------------------KDGRLAQKFKLEETPSFCVPGVQAGEFLDDALTRLGLSVRERCDMITYWLPQLEAYPFNVIYFVDVQHYGQTAKLQIFPGPDVVIRVFMAFRGTNTYEA---------------REVCAELSNLQAPAREGFVAVEWGGMNLNG 300
            +TGR + +  E   ++  I         LP    R   +G  +          +Q  +   ++ R+ GGKPV+ L  P +++A+V L L  DWSFS LYP   +  PP               +    ET +W VR   DG+L+D  TG +  YLFWEA++                    +    +  FK +   S  +P  +   +LD AL  LGL    R   ITYWLP L  +P  ++ F+    Y Q A L + P PDVV RVFM FRG    E                REV            E F  +EWGGM + G
Sbjct:  149 LTGRTITIPCERSDTVENIKFKIQDREGLPTNMQRLIFDGRQLEDGRMLSDYNVQRESTFHLVGRVVGGKPVVYLRAPEEVDATVRLSLVFDWSFSALYPVTSIEKPP---------------DACLHETVLWAVRTRADGTLLDKATGAEVSYLFWEAETNAPCQLSPPPSPVPGSIPAFRPAHASAAFKYDT--SVILPIARVPLYLDAALRALGLDTEARTSFITYWLPALLRHPHILLSFLPQDAYAQAAPLSVQPAPDVVTRVFMVFRGVAADEMGLWATEEEGRGAGIWREVVGVPQKEVQEDEELFRVLEWGGMEVKG 456          
BLAST of mRNA_A-nodosum_M_contig1027.3.1 vs. uniprot
Match: A0A7K3KJH3_9ACTN (Uncharacterized protein n=3 Tax=Bacteria TaxID=2 RepID=A0A7K3KJH3_9ACTN)

HSP 1 Score: 131 bits (329), Expect = 2.110e-33
Identity = 87/219 (39.73%), Postives = 109/219 (49.77%), Query Frame = 0
Query:   80 KPVILLYPPTQLEASVHLELSSDWSFSVLYPKPLLRGPPRSDDTLSTFQVRCSKEGSESETCVWRVRASPDGSLMDLETGKDYPYLFWEAQSKDGRLAQKFKLEETPSFCVPGVQAGEFLDDALTRLGLSVRERCDMITYWLPQLEAYPFNVIYFVDVQHYGQTAKLQIFPGPDVVIRVFMAFRGTNTYEAREVCAELSNLQAPAREGFVAVEWGGMNL 298
            KPVI LYP       V LE+    S S +YP      P    DT  T                WRV A PDG+L DL +G++  YLFWE  +        F  + +  FCV G     FL+DAL++LGL+ RE  D ITYWLP+++  P+N++ F     Y + A L I P PD VIRV MA+R         V  E   L APAR GF  VEWGG  +
Sbjct:   27 KPVIYLYPEQASVIDVTLEVEE--SLSCVYPAFASAQPT---DTGGT----------------WRVFAQPDGTLTDLSSGRELGYLFWEGDAG-------FSPDFSQGFCVSGDDMRAFLEDALSKLGLTDREAADFITYWLPRMQENPYNLVSFQG-DAYARVACLGIDPEPDTVIRVQMAWRPLEV----PVQIEPQELTAPARNGFTVVEWGGTQV 212          
BLAST of mRNA_A-nodosum_M_contig1027.3.1 vs. uniprot
Match: D7FJP3_ECTSI (Ubiquitin fusion protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJP3_ECTSI)

HSP 1 Score: 127 bits (318), Expect = 2.920e-33
Identity = 57/90 (63.33%), Postives = 72/90 (80.00%), Query Frame = 0
Query:  210 VRERCDMITYWLPQLEAYPFNVIYFVDVQHYGQTAKLQIFPGPDVVIRVFMAFRGTNTYEAREVCAELSNLQAPAREGFVAVEWGGMNLN 299
            +RERCDM+TYWLPQLE+  FNVIYFV+V+ Y + A+L I P PDV IR+FMAFRG + Y+     A++ +L+AP R+GFVAVEWGGMNLN
Sbjct:    1 MRERCDMVTYWLPQLESSAFNVIYFVNVERYEKAARLTIEPAPDVTIRIFMAFRGIDAYDKELDTAKMEDLRAPGRKGFVAVEWGGMNLN 90          
BLAST of mRNA_A-nodosum_M_contig1027.3.1 vs. uniprot
Match: D7FN69_ECTSI (Ubiquitin family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN69_ECTSI)

HSP 1 Score: 128 bits (322), Expect = 5.000e-33
Identity = 58/85 (68.24%), Postives = 66/85 (77.65%), Query Frame = 0
Query:  141 CVWRVRASPDGSLMDLETGKDYPYLFWEAQSKDGRLAQKFKLEETPSFCVPGVQAGEFLDDALTRLGLSVRERCDMITYWLPQLE 225
            C W V A+PDGSL D+ T ++YPYLFWEA S DG +   F LE+TPSFCV G  AG FLD AL RLGL+VRERCD+ITYWLPQLE
Sbjct:   74 CEWIVHANPDGSLTDISTSREYPYLFWEADSTDGLVCGNFGLEKTPSFCVAGNDAGLFLDVALERLGLNVRERCDVITYWLPQLE 158          
BLAST of mRNA_A-nodosum_M_contig1027.3.1 vs. uniprot
Match: UPI001FD7C1C3 (hypothetical protein n=1 Tax=Flavonifractor sp. AGMB03687 TaxID=2785133 RepID=UPI001FD7C1C3)

HSP 1 Score: 129 bits (323), Expect = 1.340e-32
Identity = 82/219 (37.44%), Postives = 110/219 (50.23%), Query Frame = 0
Query:   80 KPVILLYPPTQLEASVHLELSSDWSFSVLYPKPLLRGPPRSDDTLSTFQVRCSKEGSESETCVWRVRASPDGSLMDLETGKDYPYLFWEAQSKDGRLAQKFKLEETPSFCVPGVQAGEFLDDALTRLGLSVRERCDMITYWLPQLEAYPFNVIYFVDVQHYGQTAKLQIFPGPDVVIRVFMAFRGTNTYEAREVCAELSNLQAPAREGFVAVEWGGMNL 298
            KPVI LYP  + + SV L+   D +                  T  T++     +G       W V ASPDG+L D  TG+ Y  LFWE  S         + + +  FCV G     FL+DAL  LGL+ +E  + I YWLP++E  P+N+I F   + Y  +A L I P PD +IRVFMA++G +    + V  E   L AP R GF AVEWGG  +
Sbjct:   27 KPVIYLYPEEKTQVSVTLDFDGDMT-----------------STYPTYE-----DG-------WTVEASPDGTLTDPATGRQYYCLFWEGISPT-------EYDFSAGFCVAGENTAAFLEDALADLGLTEKEANEFIIYWLPKMEHNPYNLISF-QTEAYTDSAALTIDPAPDTLIRVFMAWQGLD----QPVEVEPQTLTAPNRTGFTAVEWGGAEI 204          
BLAST of mRNA_A-nodosum_M_contig1027.3.1 vs. uniprot
Match: UPI001F47E5A1 (hypothetical protein n=1 Tax=Pseudoflavonifractor phocaeensis TaxID=1870988 RepID=UPI001F47E5A1)

HSP 1 Score: 128 bits (322), Expect = 1.790e-32
Identity = 83/219 (37.90%), Postives = 111/219 (50.68%), Query Frame = 0
Query:   80 KPVILLYPPTQLEASVHLELSSDWSFSVLYPKPLLRGPPRSDDTLSTFQVRCSKEGSESETCVWRVRASPDGSLMDLETGKDYPYLFWEAQSKDGRLAQKFKLEETPSFCVPGVQAGEFLDDALTRLGLSVRERCDMITYWLPQLEAYPFNVIYFVDVQHYGQTAKLQIFPGPDVVIRVFMAFRGTNTYEAREVCAELSNLQAPAREGFVAVEWGGMNL 298
            KPVI LYP  + E  V +EL  D   +  YP                     S EGS      W V A+PDG+L D   GK+Y YL+WE          + + + +  FCV G     FL+DAL +LGL+ RE  + I YWLPQLE+ P+N+I F   + Y   A+L + P PD+++RVFMA++   +     V  E   L AP R GF  VEWGG  +
Sbjct:   27 KPVIYLYP--EEETLVTVELDYDGQLTCTYP---------------------SYEGS------WTVIAAPDGTLTD-GAGKEYNYLYWEG-------VDRTRYDFSQGFCVAGADIAAFLEDALAQLGLTRREANEFIVYWLPQLESNPYNLISFQG-EAYTSHARLSVTPAPDILLRVFMAWKPLES----PVEVEPQVLTAPERSGFTVVEWGGSKV 203          
BLAST of mRNA_A-nodosum_M_contig1027.3.1 vs. uniprot
Match: A0A067SQM9_GALM3 (Ubiquitin-like domain-containing protein n=1 Tax=Galerina marginata (strain CBS 339.88) TaxID=685588 RepID=A0A067SQM9_GALM3)

HSP 1 Score: 134 bits (336), Expect = 2.080e-32
Identity = 96/321 (29.91%), Postives = 136/321 (42.37%), Query Frame = 0
Query:   13 GRHMLLRVEEDMSMGKIFETFAACNELPAKDLRFWLNGETIPLAETPRTLGLQDGAEIRVILRLTGGKPVILLYPPTQLEASVHLELSSDWSFSVLYPKPLLRGPPRSDDTLSTFQVRCSKEGSESETCVWRVRASPDGSLMDLETGKDYPYLFWEAQSK--------------DGRLAQKFK-----LEETPSFCVPGVQAGEFLDDALTRLGLSVRERCDMITYWLPQLEAYPFNVIYFVDVQHYGQTAKLQIFPGPDVVIRVFMAFRGTNTYEAREVCAELSNLQAPA----------------REGFVAVEWGGMNL 298
            G    + V       KI  +F+         L+   N   I   +T  + G++DG  I  ++   GGKPVI L+ P+ LEASV L L+  W+ S +YP   ++  PR+  T               E   WRV+  P+G L  L TG D  YLFWEA +               + R A+ F      + +  S  VP  +   +LD+AL  LGL +  R   ITYWLP +  +      F+    Y   A L++ P PDVV RVFM F+G    +  +  A  S   A                   + F  +EWGGM +
Sbjct:  122 GSTFSISVTPTTKFDKILNSFSDKIGKERGSLKLIYNNSRIGGYDTVESCGIEDGDTIYCLVEQLGGKPVIYLFSPSALEASVKLSLAPQWNLSAIYPVVPIK--PRTAQT--------------HEEVSWRVKVHPNGELTALVTGLDVAYLFWEAHTDATVPTSPPPSPLLGESRQAEIFNPNEAVINDENSVVVPVEKITPYLDEALCCLGLHIEARTSFITYWLPSMLKHKNIAFRFIPQASYEHAAPLEVSPSPDVVTRVFMVFQGVADEDLGQWSAATSKAGADVSWWREVVGVDLERALDEKLFRVLEWGGMEV 426          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1027.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4B4_ECTSI3.590e-8247.59Ubiquitin-like domain-containing protein n=1 Tax=E... [more]
A0A8H4VHY2_9AGAR2.630e-4032.13Ubiquitin-like domain-containing protein n=1 Tax=A... [more]
A0A7X5D8X7_9CLOT5.010e-3638.18Uncharacterized protein n=2 Tax=Bacteria TaxID=2 R... [more]
A0A8H6WWT2_9AGAR5.900e-3530.15Ubiquitin family protein n=2 Tax=Mycena kentingens... [more]
A0A7K3KJH3_9ACTN2.110e-3339.73Uncharacterized protein n=3 Tax=Bacteria TaxID=2 R... [more]
D7FJP3_ECTSI2.920e-3363.33Ubiquitin fusion protein n=1 Tax=Ectocarpus silicu... [more]
D7FN69_ECTSI5.000e-3368.24Ubiquitin family protein n=1 Tax=Ectocarpus silicu... [more]
UPI001FD7C1C31.340e-3237.44hypothetical protein n=1 Tax=Flavonifractor sp. AG... [more]
UPI001F47E5A11.790e-3237.90hypothetical protein n=1 Tax=Pseudoflavonifractor ... [more]
A0A067SQM9_GALM32.080e-3229.91Ubiquitin-like domain-containing protein n=1 Tax=G... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.20.90coord: 2..81
e-value: 8.3E-13
score: 50.3
NoneNo IPR availableCDDcd01763Ubl_SUMO_likecoord: 4..73
e-value: 2.68719E-12
score: 59.1309
IPR000626Ubiquitin-like domainPROSITEPS50053UBIQUITIN_2coord: 4..79
score: 10.658268
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 4..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1027contigA-nodosum_M_contig1027:138807..140558 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1027.3.1mRNA_A-nodosum_M_contig1027.3.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1027 137581..140899 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1027.3.1 ID=prot_A-nodosum_M_contig1027.3.1|Name=mRNA_A-nodosum_M_contig1027.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=307bp
MQGITVIFTFMTGRHMLLRVEEDMSMGKIFETFAACNELPAKDLRFWLNG
ETIPLAETPRTLGLQDGAEIRVILRLTGGKPVILLYPPTQLEASVHLELS
SDWSFSVLYPKPLLRGPPRSDDTLSTFQVRCSKEGSESETCVWRVRASPD
GSLMDLETGKDYPYLFWEAQSKDGRLAQKFKLEETPSFCVPGVQAGEFLD
DALTRLGLSVRERCDMITYWLPQLEAYPFNVIYFVDVQHYGQTAKLQIFP
GPDVVIRVFMAFRGTNTYEAREVCAELSNLQAPAREGFVAVEWGGMNLNG
GGLHQY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin-like_dom
IPR029071Ubiquitin-like_domsf