prot_A-nodosum_M_contig10243.2.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig10243.2.1
Unique Nameprot_A-nodosum_M_contig10243.2.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length52
Homology
BLAST of mRNA_A-nodosum_M_contig10243.2.1 vs. uniprot
Match: D8LR02_ECTSI (Beta-(1,2)-xylosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR02_ECTSI)

HSP 1 Score: 97.1 bits (240), Expect = 3.150e-22
Identity = 47/52 (90.38%), Postives = 47/52 (90.38%), Query Frame = 0
Query:    1 ARFVTPCFHTGLVRAYSDFVIRGLALQGETRYASPPSKKVVVTWMARRSSVQ 52
            AR VTPCFHT LVRAYSDFVIRGL LQG T YASPPSKKVVVTWMARRSSVQ
Sbjct:  406 ARMVTPCFHTALVRAYSDFVIRGLDLQGMTSYASPPSKKVVVTWMARRSSVQ 457          
BLAST of mRNA_A-nodosum_M_contig10243.2.1 vs. uniprot
Match: A0A6H5JCY8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCY8_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 2.850e-18
Identity = 47/71 (66.20%), Postives = 47/71 (66.20%), Query Frame = 0
Query:    1 ARFVTPCFHTGLVRAYSDFVIR-------------------GLALQGETRYASPPSKKVVVTWMARRSSVQ 52
            AR VTPCFHT LVRAYSDFVIR                   GL LQG T YASPPSKKVVVTWMARRSSVQ
Sbjct:  125 ARMVTPCFHTALVRAYSDFVIRLVFCSNNNLVFVSKTVRGRGLDLQGMTSYASPPSKKVVVTWMARRSSVQ 195          
BLAST of mRNA_A-nodosum_M_contig10243.2.1 vs. uniprot
Match: F0YEW7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YEW7_AURAN)

HSP 1 Score: 58.5 bits (140), Expect = 1.140e-8
Identity = 31/48 (64.58%), Postives = 36/48 (75.00%), Query Frame = 0
Query:    5 TPCFHTGLVRAYSDFVIRGLALQGETRYASPPS--KKVVVTWMARRSS 50
            T C  + +VRAYSDFVIRGL LQG  RYA+P    K VVVT++ARRSS
Sbjct:  477 TRCKASSVVRAYSDFVIRGLGLQGAARYAAPDGDPKDVVVTFLARRSS 524          
BLAST of mRNA_A-nodosum_M_contig10243.2.1 vs. uniprot
Match: A0A8J2WYB3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WYB3_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 1.550e-8
Identity = 31/51 (60.78%), Postives = 38/51 (74.51%), Query Frame = 0
Query:    1 ARFVTPCFHTGLVRAYSDFVIRGLALQGETRYASPPS-KKVVVTWMARRSS 50
            A F T C  + +VRAYSDFVIR L LQ  TRY + P+ ++VVVT+MARRSS
Sbjct:  381 ASFNTKCARSSIVRAYSDFVIRALGLQLRTRYHTKPNPQRVVVTFMARRSS 431          
BLAST of mRNA_A-nodosum_M_contig10243.2.1 vs. uniprot
Match: A0A7S2MDM3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MDM3_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 1.390e-7
Identity = 30/50 (60.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:    1 ARFVTPCFHTGLVRAYSDFVIRGLALQGETRYASPPSKKVVVTWMARRSS 50
            A + TPC HT LVRAY+D+V+RGL L  E   A   SK V VTWMARR+S
Sbjct:  415 ASWQTPCKHTPLVRAYADYVVRGLELVQEP--ALWTSKTVTVTWMARRAS 462          
BLAST of mRNA_A-nodosum_M_contig10243.2.1 vs. uniprot
Match: A0A482SEX5_9ARCH (Glycosyltransferase family 61 protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SEX5_9ARCH)

HSP 1 Score: 54.3 bits (129), Expect = 3.050e-7
Identity = 29/51 (56.86%), Postives = 36/51 (70.59%), Query Frame = 0
Query:    1 ARFVTPCFHTGLVRAYSDFVIRGLALQGETRYA-SPPSKKVVVTWMARRSS 50
            A + TPC  T L+RA++DFVIRGL LQ  T YA S PSK V V+++ RR S
Sbjct:   65 ASWDTPCKRTALMRAWADFVIRGLGLQAYTHYAMSQPSKVVRVSYLTRRPS 115          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10243.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LR02_ECTSI3.150e-2290.38Beta-(1,2)-xylosyltransferase n=1 Tax=Ectocarpus s... [more]
A0A6H5JCY8_9PHAE2.850e-1866.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
F0YEW7_AURAN1.140e-864.58Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A8J2WYB3_9STRA1.550e-860.78Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2MDM3_9STRA1.390e-760.00Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A482SEX5_9ARCH3.050e-756.86Glycosyltransferase family 61 protein n=1 Tax=arch... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig10243contigA-nodosum_M_contig10243:6385..6944 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig10243.2.1mRNA_A-nodosum_M_contig10243.2.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig10243 6385..6944 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig10243.2.1 ID=prot_A-nodosum_M_contig10243.2.1|Name=mRNA_A-nodosum_M_contig10243.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=52bp
ARFVTPCFHTGLVRAYSDFVIRGLALQGETRYASPPSKKVVVTWMARRSS
VQ
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