prot_A-nodosum_M_contig1021.3.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_A-nodosum_M_contig1021.3.1
Unique Name	prot_A-nodosum_M_contig1021.3.1
Type	polypeptide
Organism	Ascophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length	118

Homology

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BLAST of mRNA_A-nodosum_M_contig1021.3.1 vs. uniprot
Match: A0A6H5JUS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUS2_9PHAE)

HSP 1 Score: 139 bits (350), Expect = 2.550e-38
Identity = 65/109 (59.63%), Postives = 83/109 (76.15%), Query Frame = 0

Query:    1 VPIAPFETSWSTTGDDRGHETRHQVPLALCWAITMHKSQGQTMDKAVVDLGKSESTAGLTFVCLSRAKRLADLLIEPMPLERLSKIGDTPTLQLRLREEVRLNALAGET 109
            VPI+P +T+W     D G + R Q+PL LCWAITMHKSQGQT+ KAV+DLG  E+  GLTFVCLSRAKRL DL++EPM  +R+  +G++PT++ RL+EEVRL  LA  T
Sbjct:  169 VPISPVDTTWQ----DGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRLGELAQST 273

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BLAST of mRNA_A-nodosum_M_contig1021.3.1 vs. uniprot
Match: A0A6H5JMH2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMH2_9PHAE)

HSP 1 Score: 134 bits (336), Expect = 1.890e-37
Identity = 62/100 (62.00%), Postives = 77/100 (77.00%), Query Frame = 0

Query:   10 WSTTGDDRGHETRHQVPLALCWAITMHKSQGQTMDKAVVDLGKSESTAGLTFVCLSRAKRLADLLIEPMPLERLSKIGDTPTLQLRLREEVRLNALAGET 109
            WST   D G + R Q+PL LCWAITMHKSQGQT+ KAV+DLG  E+  GLTFVCLSRAKRL DL++EPM  +R+  +G++PT++ RL+EEVRL  LA  T
Sbjct:   67 WSTGRKDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRLGELAQST 166

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BLAST of mRNA_A-nodosum_M_contig1021.3.1 vs. uniprot
Match: A0A6H5KSF1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSF1_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 3.370e-37
Identity = 60/96 (62.50%), Postives = 76/96 (79.17%), Query Frame = 0

Query:   14 GDDRGHETRHQVPLALCWAITMHKSQGQTMDKAVVDLGKSESTAGLTFVCLSRAKRLADLLIEPMPLERLSKIGDTPTLQLRLREEVRLNALAGET 109
            G+D G + R Q+PL LCWAITMHKSQGQT+ KAV+DLG  E+  GLTFVCLSRAKRL DL++EPM  +R+  +G++PT++ RL+EEVRL  LA  T
Sbjct:    7 GEDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRLGELAQST 102

[Close]

BLAST of mRNA_A-nodosum_M_contig1021.3.1 vs. uniprot
Match: A0A6H5JFG8_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG8_9PHAE)

HSP 1 Score: 139 bits (350), Expect = 7.120e-37
Identity = 65/109 (59.63%), Postives = 83/109 (76.15%), Query Frame = 0

Query:    1 VPIAPFETSWSTTGDDRGHETRHQVPLALCWAITMHKSQGQTMDKAVVDLGKSESTAGLTFVCLSRAKRLADLLIEPMPLERLSKIGDTPTLQLRLREEVRLNALAGET 109
            VPI+P +T+W     D G + R Q+PL LCWAITMHKSQGQT+ KAV+DLG  E+  GLTFVCLSRAKRL DL++EPM  +R+  +G++PT++ RL+EEVRL  LA  T
Sbjct:  343 VPISPVDTTWQ----DGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRLGELAQST 447

[Close]

BLAST of mRNA_A-nodosum_M_contig1021.3.1 vs. uniprot
Match: A0A6H5K4U7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4U7_9PHAE)

HSP 1 Score: 139 bits (350), Expect = 9.240e-37
Identity = 65/109 (59.63%), Postives = 83/109 (76.15%), Query Frame = 0

Query:    1 VPIAPFETSWSTTGDDRGHETRHQVPLALCWAITMHKSQGQTMDKAVVDLGKSESTAGLTFVCLSRAKRLADLLIEPMPLERLSKIGDTPTLQLRLREEVRLNALAGET 109
            VPI+P +T+W     D G + R Q+PL LCWAITMHKSQGQT+ KAV+DLG  E+  GLTFVCLSRAKRL DL++EPM  +R+  +G++PT++ RL+EEVRL  LA  T
Sbjct:   60 VPISPVDTTWQ----DGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRLGELAQST 164

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BLAST of mRNA_A-nodosum_M_contig1021.3.1 vs. uniprot
Match: A0A6H5KCP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCP5_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 1.480e-36
Identity = 60/97 (61.86%), Postives = 77/97 (79.38%), Query Frame = 0

Query:   13 TGDDRGHETRHQVPLALCWAITMHKSQGQTMDKAVVDLGKSESTAGLTFVCLSRAKRLADLLIEPMPLERLSKIGDTPTLQLRLREEVRLNALAGET 109
            +G+D G + R Q+PL LCWAITMHKSQGQT+ KAV+DLG  E+  GLTFVCLSRAKRL DL++EPM  +R+  +G++PT++ RL+EEVRL  LA  T
Sbjct:    4 SGEDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRLGELAQST 100

[Close]

BLAST of mRNA_A-nodosum_M_contig1021.3.1 vs. uniprot
Match: A0A6H5KN08_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN08_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 3.130e-35
Identity = 60/97 (61.86%), Postives = 77/97 (79.38%), Query Frame = 0

Query:   13 TGDDRGHETRHQVPLALCWAITMHKSQGQTMDKAVVDLGKSESTAGLTFVCLSRAKRLADLLIEPMPLERLSKIGDTPTLQLRLREEVRLNALAGET 109
            +G+D G + R Q+PL LCWAITMHKSQGQT+ KAV+DLG  E+  GLTFVCLSRAKRL DL++EPM  +R+  +G++PT++ RL+EEVRL  LA  T
Sbjct:    4 SGEDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRLGELAQST 100

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BLAST of mRNA_A-nodosum_M_contig1021.3.1 vs. uniprot
Match: A0A6H5KFN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFN2_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 1.970e-33
Identity = 54/87 (62.07%), Postives = 71/87 (81.61%), Query Frame = 0

Query:   13 TGDDRGHETRHQVPLALCWAITMHKSQGQTMDKAVVDLGKSESTAGLTFVCLSRAKRLADLLIEPMPLERLSKIGDTPTLQLRLREE 99
            +G+D G + R Q+PL LCWAITMHKSQGQT+ KAV+DLG  E+  GLTFVCLSRAKRL DL++EPM  +R+  +G++PT++ RL+EE
Sbjct:    4 SGEDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEE 90

[Close]

BLAST of mRNA_A-nodosum_M_contig1021.3.1 vs. uniprot
Match: A0A6H5K214_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K214_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 4.660e-33
Identity = 58/94 (61.70%), Postives = 73/94 (77.66%), Query Frame = 0

Query:   16 DRGHETRHQVPLALCWAITMHKSQGQTMDKAVVDLGKSESTAGLTFVCLSRAKRLADLLIEPMPLERLSKIGDTPTLQLRLREEVRLNALAGET 109
            D G + R Q+PL LCWAITMHKSQGQT+ KAV+DLG  E+  GLTFVCLSRAKRL DL++EPM  +R+  +G++ T++ RL+EEVRL  LA  T
Sbjct:    4 DGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLIVEPMSFDRIGNLGNSSTMKGRLQEEVRLGELARTT 97

[Close]

BLAST of mRNA_A-nodosum_M_contig1021.3.1 vs. uniprot
Match: A0A6H5L976_9PHAE (ATP-dependent DNA helicase n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L976_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 4.870e-33
Identity = 63/114 (55.26%), Postives = 83/114 (72.81%), Query Frame = 0

Query:    1 VPIAPFETSWSTTGDDRGHETRHQVPLALCWAITMHKSQGQTMDKAVVDLGKSESTAGLTFVCLSRAKRLADLLIEPMPLERLSKIGDTPTLQLRLREEV-----RLNALAGET 109
            VPI+P +T+W     D G + R Q+PL LCWAITMHKSQGQT+ KAV+DLG  E+  GLTFVCLSRAKRL DL++EPM  +R+  +G++PT++ RL+EE      R NA+  E+
Sbjct: 1474 VPISPVDTTWQ----DGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEASDALDRQNAIFDES 1583

The following BLAST results are available for this feature:

BLAST of mRNA_A-nodosum_M_contig1021.3.1 vs. uniprot

BLAST of mRNA_A-nodosum_M_contig1021.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JUS2_9PHAE	2.550e-38	59.63	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JMH2_9PHAE	1.890e-37	62.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KSF1_9PHAE	3.370e-37	62.50	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JFG8_9PHAE	7.120e-37	59.63	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5K4U7_9PHAE	9.240e-37	59.63	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KCP5_9PHAE	1.480e-36	61.86	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KN08_9PHAE	3.130e-35	61.86	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5KFN2_9PHAE	1.970e-33	62.07	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K214_9PHAE	4.660e-33	61.70	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5L976_9PHAE	4.870e-33	55.26	ATP-dependent DNA helicase n=4 Tax=Ectocarpus sp. ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 12..72 e-value: 6.2E-6 score: 28.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 19..76
None	No IPR available	PANTHER	PTHR23274	DNA HELICASE-RELATED	coord: 9..77
None	No IPR available	PANTHER	PTHR23274:SF11	ATP-DEPENDENT DNA HELICASE PIF1	coord: 9..77
None	No IPR available	CDD	cd18809	SF1_C_RecD	coord: 28..71 e-value: 3.59358E-11 score: 52.9491

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
A-nodosum_M_contig1021	contig	A-nodosum_M_contig1021:19589..19942 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ascophyllum nodosum dioecious OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_A-nodosum_M_contig1021.3.1	mRNA_A-nodosum_M_contig1021.3.1	Ascophyllum nodosum dioecious	mRNA	A-nodosum_M_contig1021 19589..19942 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_A-nodosum_M_contig1021.3.1 ID=prot_A-nodosum_M_contig1021.3.1|Name=mRNA_A-nodosum_M_contig1021.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=118bp
VPIAPFETSWSTTGDDRGHETRHQVPLALCWAITMHKSQGQTMDKAVVDL
GKSESTAGLTFVCLSRAKRLADLLIEPMPLERLSKIGDTPTLQLRLREEV
RLNALAGETLRLHGGVE*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase