prot_A-nodosum_M_contig102.70.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig102.70.1
Unique Nameprot_A-nodosum_M_contig102.70.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length157
Homology
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BLAST of mRNA_A-nodosum_M_contig102.70.1 vs. uniprot
Match: A0A6H5KFW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFW8_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 1.320e-11
Identity = 43/110 (39.09%), Postives = 61/110 (55.45%), Query Frame = 0 
Query:   56 DCRVAGHYNTAICKSTAQDSNTDANPIEDDSTDVS------AGVPDFDLEELMKGLNIGSPR-KTSGASSTVGS--EINEMKLIMALRKQMGEEDFKAIFDCRNPRIGDL 156
            D R A H    +   TA+D        EDD  D++      A + D +L++++  +  G  R KT    S  G   E++E K+IM LR++MGEEDF A+FD RNPRIGD+
Sbjct:   36 DRREARHAAGRVLACTAKDEGNKGVADEDDPLDLNLDDFSEAEISDAELDKMLHAVEHGISRHKTKALGSKAGQRGEVDEAKMIMLLRQKMGEEDFYAVFDPRNPRIGDV 145
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BLAST of mRNA_A-nodosum_M_contig102.70.1 vs. uniprot
Match: D8LEU1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEU1_ECTSI)

HSP 1 Score: 64.3 bits (155), Expect = 1.220e-9
Identity = 40/109 (36.70%), Postives = 61/109 (55.96%), Query Frame = 0 
Query:   58 RVAGHYNTAICKSTAQDSNTDANPIEDDSTDVS------AGVPDFDLEELMKGLNIG----SPRKTSGASSTVGSEINEMKLIMALRKQMGEEDFKAIFDCRNPRIGDL 156
            R A H    +   TA+D        EDD  D++      A + D +L+++++ +  G     P+   G +   G E++E K+IM LR++MGEEDF A+FD RNPRIGD+
Sbjct:  103 REARHAAGRVLACTAKDEANKGVADEDDPLDLNLDDFSEAEISDAELDKMLQAVEHGISRHKPKALDGEAGRRG-EVDEAKMIMLLRQKMGEEDFYAVFDPRNPRIGDV 210
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig102.70.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KFW8_9PHAE1.320e-1139.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LEU1_ECTSI1.220e-936.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig102contigA-nodosum_M_contig102:352369..373226 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig102.70.1mRNA_A-nodosum_M_contig102.70.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig102 351992..373262 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig102.70.1 ID=prot_A-nodosum_M_contig102.70.1|Name=mRNA_A-nodosum_M_contig102.70.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=157bp
MNCVICCLLLLYKAGAFITHVSLSNRAMSSSWQEERKSLTNCRARQQPKL
RSQKSDCRVAGHYNTAICKSTAQDSNTDANPIEDDSTDVSAGVPDFDLEE
LMKGLNIGSPRKTSGASSTVGSEINEMKLIMALRKQMGEEDFKAIFDCRN
PRIGDL*
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