prot_A-nodosum_M_contig1018.24.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1018.24.1
Unique Nameprot_A-nodosum_M_contig1018.24.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length459
Homology
BLAST of mRNA_A-nodosum_M_contig1018.24.1 vs. uniprot
Match: D8LHV2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHV2_ECTSI)

HSP 1 Score: 438 bits (1126), Expect = 1.490e-147
Identity = 239/451 (52.99%), Postives = 287/451 (63.64%), Query Frame = 0
Query:    9 SASLPCLHFQALATFSSWVHRVARRETSGCRVDAAKVELYSIRDDGVEADGNFAQSGPLGNPRFPVRNEYLAGWALTQNNTDYLDRLLAMGYTVPGVSARLSTLSSDDGSSEDSRDRE---ELWGEATRALLHRVDVAHDRDQRRLAASSYWQRLQNAPRPSEHPPENAEAMSVTTD-----GSVFPSWAEVHALFEHDAGFVRRERERLMQEAAVSMPQ--GWRDGVVSRAWVASYRLSVFETRRQAQRFFSWAIPDEGALDCVLEPGKRVVEVGSGLGYWAHLLKMRSGDETRVRCFDPYAP-----TELITNLE---MGVEPSESNGDESASSESAGAENEDGEAEAWFGEERGPFTRTVRGSFEWIADDPGGFQNWSLFVCWPSDGQWPKACLQAFRGDDFFYVGEGEGGATRMPWKMLREEWQLERMVEIPRWPGFKDALWWYRRR 441
            +++LP   F   +        +    +   R  +A+  L         AD      G L NPR PV NEYLAGWALTQ +T  L R   MGYT  G           + S E+++  +    LWGEAT+AL+ RVD+ HD DQRRLAAS YWQRLQ+ P P E P  N       TD     G   P+WA+V ALFE D GFVRRE ER ++EA   MP   GW    VSR WVASY+LSVFETRRQAQRFFSW IPDEGALDC+LEPG RV+EVGSGLGYWA+LLK+RSGD++RVRCFDP+AP     TE+ T  +     VE +     E+  S    +  E+ E + WFGE R PF+   RGSF+ IA + G F+ WSL +CWPSDGQWP  CLQ F G+DFFYVGEGEGGATRMPW++LREEW+L R VEIP WPGF+DALWWY R+
Sbjct:   26 TSTLPLCSFAGSSRLRWQDDTIGHSSSGASRRGSARWRLRPSAAAADAADEGADYEGRLDNPRRPVPNEYLAGWALTQYDTACLQRFQDMGYTDCG---------DQESSPEETKGEKAGFRLWGEATKALMDRVDIVHDLDQRRLAASRYWQRLQSTP-PKEAPASNTGNKGKFTDLDPSPGLAAPTWADVDALFESDNGFVRRESERYIEEAREGMPSEGGWSGDRVSRQWVASYQLSVFETRRQAQRFFSWGIPDEGALDCILEPGNRVLEVGSGLGYWAYLLKLRSGDDSRVRCFDPFAPPARQRTEVSTTEDESGYSVEEAPPRSIENVPSPEPISMREE-EVDDWFGEGREPFSPAERGSFDRIAREDG-FRKWSLLICWPSDGQWPAGCLQEFAGNDFFYVGEGEGGATRMPWRVLREEWELVRRVEIPTWPGFRDALWWYTRK 464          
BLAST of mRNA_A-nodosum_M_contig1018.24.1 vs. uniprot
Match: A0A6H5JT97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT97_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 8.280e-11
Identity = 68/221 (30.77%), Postives = 98/221 (44.34%), Query Frame = 0
Query:  250 FSWAIPDEGALDCVLEPGKRVVEVGSGLGYWAHLLKMRSGDETRVRCFDPYAPTELITNL---EMGVEPSESNGDESASSESAGAENEDGEAEAWFGEERGPFTRTVRGSFEWIADDPGGFQNWSLFVCWPSDGQWPKA-----CLQAFRGDDFFYVGEGEGGATRM-----PW-KMLREEWQLERM--------VEIPRWPGFKDALWWYRRRGATPLPY 448
            F+WAIPDE AL  +   G  +VE+GSGLGYWA LL+ R  D   +  +D  A T    +        +   ++ D    S + G   ED  A+   G+E   F   V      + ++P   +  SLF+C+P D +         CL AF GD   +VGE  G +  M     PW +   +E Q E          V +P WP  +D L  ++R     + Y
Sbjct:   81 FAWAIPDERALRIIKHFGP-IVEIGSGLGYWAKLLRARGVD---INAYDKVAGTPDTASAAPDSSRTKGKSTSKDAKVKSAAEGVVKED--ADEGGGDETPSFWIKVNEGGPDVLEEPCN-EGRSLFLCYPDDFEGETESLGLRCLHAFEGDVVIHVGELFGDSVSMTPGQSPWGRTTSQECQEELASKFHCILKVPLPSWPHSRDTLTVWKRHSFCSIQY 294          
BLAST of mRNA_A-nodosum_M_contig1018.24.1 vs. uniprot
Match: D8LFK6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFK6_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 2.500e-10
Identity = 72/226 (31.86%), Postives = 101/226 (44.69%), Query Frame = 0
Query:  250 FSWAIPDEGALDCVLEPGKRVVEVGSGLGYWAHLLKMRSGDETRVRCFDPYAPTELITNLEMGVEPSESNG-----DESASSESAGAENEDGEAEAWFGEERGPFTRTVRGSFEWIADDPGGFQNWSLFVCWPSDGQWPKA-----CLQAFRGDDFFYVGEGEGGATRM-----PW-KMLREEWQLERM--------VEIPRWPGFKDALWWYRRRGATPLPYRQD 451
            F+WAIPDE AL  +   G  +VEVGSGLGYWA LL+ R  D   +  +D  A T    +     + S++ G     D    S + G   ED  A+   G E   F   V      + ++P   ++ SLF+C+P D +         CL AF GD   +VGE  G +  M     PW +   +E Q E          V +P WP  +D L  ++R     + Y  D
Sbjct:   82 FAWAIPDERALRIIKHFGP-IVEVGSGLGYWAKLLRARGVD---INPYDKVAGTPDTASA--APDSSQTKGKSTSKDAKVKSAAEGDGKED--ADEGGGGEAPSFWIKVNEGGPDVLEEPCN-EDRSLFLCYPDDFEGETESLGLRCLHAFEGDVVIHVGELFGDSVSMTPGQSPWGRTTSQECQEELASKFHCILKVPLPSWPHSRDTLTVWKRHSFCSIQYDDD 298          
BLAST of mRNA_A-nodosum_M_contig1018.24.1 vs. uniprot
Match: A0A8J5D1W5_9CHEL (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 n=1 Tax=Nymphon striatum TaxID=424472 RepID=A0A8J5D1W5_9CHEL)

HSP 1 Score: 58.5 bits (140), Expect = 1.920e-5
Identity = 60/235 (25.53%), Postives = 93/235 (39.57%), Query Frame = 0
Query:  225 GVVSRAWVASYRLSVFE--TRRQAQRFFSWAIPDEGALDCVLEPGKRVVEVGSGLGYWAHLLKMRSGDETRVRCFDP--YAPTELITNLEMGVEPSESNGDESASSESAGAENEDGEAEAWFGEERGPFTRTVRGSFEWIADDPGGFQNWSLFVCWPSDGQ---WPKACLQAFRGDDFFYVGEGEGGATRM-PW-KMLREEWQLE--------RMVEIPRWPGFKDALWWYRRRG 442
            G + R  +  +  SV E  + +  Q  FS++IP+E AL  V +  K ++ +GSG GYW HLL+    D   + CFD     P+E+        EP                                    TV  +F+             LF+ WP   +   +   CL  ++GD   +VGE  G    + PW +    E+QL         + +++P WPG  D+L  + R G
Sbjct:  553 GKIERLLLVKWIRSVEERDSSKSLQIKFSFSIPNEEALQAVKDLNKPIISMGSGTGYWEHLLENSGCD---IICFDKNNLYPSEMQYRHIQTGEP------------------------------------TVLKNFKKRV----------LFLSWPDADETSTFSMECLSEYQGDIIIHVGELFGSTQFVNPWGQSTTHEFQLALVKKFRKVKEIKLPNWPGHLDSLTIWNRIG 738          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1018.24.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LHV2_ECTSI1.490e-14752.99Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JT97_9PHAE8.280e-1130.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFK6_ECTSI2.500e-1031.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A8J5D1W5_9CHEL1.920e-525.53SWI/SNF-related matrix-associated actin-dependent ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 308..344
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 312..330
NoneNo IPR availablePANTHERPTHR39290FAMILY NOT NAMEDcoord: 235..441
IPR029063S-adenosyl-L-methionine-dependent methyltransferase superfamilySUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 256..299

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1018contigA-nodosum_M_contig1018:174876..181383 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1018.24.1mRNA_A-nodosum_M_contig1018.24.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1018 174605..181637 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1018.24.1 ID=prot_A-nodosum_M_contig1018.24.1|Name=mRNA_A-nodosum_M_contig1018.24.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=459bp
MWLVASLASASLPCLHFQALATFSSWVHRVARRETSGCRVDAAKVELYSI
RDDGVEADGNFAQSGPLGNPRFPVRNEYLAGWALTQNNTDYLDRLLAMGY
TVPGVSARLSTLSSDDGSSEDSRDREELWGEATRALLHRVDVAHDRDQRR
LAASSYWQRLQNAPRPSEHPPENAEAMSVTTDGSVFPSWAEVHALFEHDA
GFVRRERERLMQEAAVSMPQGWRDGVVSRAWVASYRLSVFETRRQAQRFF
SWAIPDEGALDCVLEPGKRVVEVGSGLGYWAHLLKMRSGDETRVRCFDPY
APTELITNLEMGVEPSESNGDESASSESAGAENEDGEAEAWFGEERGPFT
RTVRGSFEWIADDPGGFQNWSLFVCWPSDGQWPKACLQAFRGDDFFYVGE
GEGGATRMPWKMLREEWQLERMVEIPRWPGFKDALWWYRRRGATPLPYRQ
DTLPPAPM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases_sf