prot_A-nodosum_M_contig1017.3.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1017.3.1
Unique Nameprot_A-nodosum_M_contig1017.3.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length1132
Homology
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BLAST of mRNA_A-nodosum_M_contig1017.3.1 vs. uniprot
Match: D7G0P3_ECTSI (Imm downregulated 18 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0P3_ECTSI)

HSP 1 Score: 316 bits (809), Expect = 1.270e-88
Identity = 226/483 (46.79%), Postives = 287/483 (59.42%), Query Frame = 0 
Query:  675 SHTEMIPTSMVMDQISAIQRVIDSIDERVAVIEGINMDRDVEVSPQATPEGLTAEQAAAFV-----RKAKEETQSRLIAEMLALEERVDKRAQEEAKRLRDEREADATRSSMRRVSATVSAYTTDLATRLEELQADHEKQGTEVARAAEEIVATDTSVKNLGSELVVLGEVANKMSIAVDDKADQTDVEALKLAMQKLDAT--NKAQGASA-ATREAEALDALQTALNNMSIRMEGSIQKLQKTQSSAGTIKMKPLLDRVMQELTAAGMLPDPDLGEGAIGRSLCLSCNRPMNMAMEHRPKTFTSQFRG-TLGSRMEHAAFRSPK-VEKPAAIWRGGFRMPASK--GNQHDWIRT----------------RTAGRSGATSGQRFSQGGTVMNAQQ-------PPSDFRFG--GESARYDANFVEEKLPGLPNVRDSVRREGRPSSGGIPSSRGTRAV----------KLRATSEAPYRGRFV 1110
            S  E I   ++ D+I  ++R +  + ERVA +E             A   GL+ E+AAA       R A EETQ+RL AEM ALEERVD+RA+EEA+           R +MRRVSATVSAYT DLATRL+ L+++HE+QG  V R AEE+ A +  ++ LGSELV LG+VAN +S+ VD KADQTDVEALK AMQ+LDAT   KA+G+SA A R+AEA+ ALQ A  +MS  MEGSI+KLQ+ Q++AG+IK+KPLLDRV++ELT AGMLPDPD G+GA+GRS+CLSCNRPM +A +     F SQFRG TLGSRME  +  +P  + KP+ IWRGGF+MP  +   + H+  R                  TAG  G                         PPSD   G  G  A  D      +LPG+PN+ DS    GR + GG     G   V           L A+S+AP+RGRFV
Sbjct:  432 SRIEEILAGVLGDEIPTLRRDLGGVTERVAHLEA------TVAEDGAGGAGLSVEEAAAAAADAASRLANEETQARLAAEMSALEERVDRRAREEARXXXXXXXXAEARGAMRRVSATVSAYTADLATRLDGLKSEHEEQGAVVTRTAEELAAAEAGLRTLGSELVGLGQVANSVSMVVDGKADQTDVEALKHAMQRLDATVTAKARGSSATAARDAEAMGALQVAFRDMSASMEGSIRKLQQAQAAAGSIKVKPLLDRVVKELTEAGMLPDPDAGQGAVGRSMCLSCNRPMTVAGDQSSSRFASQFRGGTLGSRMEKMSSNNPMHINKPSVIWRGGFKMPPHRVPASAHERQRXXXXXXXXXXXXXXXXXETAGAVGDGXXXXXXXXXXXXXXXXXXXXQILPPSDEVLGPGGIDASRDG-----RLPGIPNMLDSTSAGGRETGGGAGVVGGVVGVGGRNKRVSVGSLAASSDAPHRGRFV 903
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1017.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G0P3_ECTSI1.270e-8846.79Imm downregulated 18 n=2 Tax=Ectocarpus TaxID=2879... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 736..771
NoneNo IPR availableCOILSCoilCoilcoord: 799..819
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 560..591
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1070..1131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1017contigA-nodosum_M_contig1017:149127..157648 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1017.3.1mRNA_A-nodosum_M_contig1017.3.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1017 149034..158295 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1017.3.1 ID=prot_A-nodosum_M_contig1017.3.1|Name=mRNA_A-nodosum_M_contig1017.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1132bp
MAGEDQEDVAVIEDVITEPAVPATPREQRVGSTGDLPLTFKLQSSCTLQE
AWPISLLDEGDLKDGGKNLVVFTIDVHHLDEIVKVMHTQINILKQTILDL
CQGAALDNSNRADEVRILRSKIDALEKVPPSLPATSESLDEQNRQRFSNV
EGRIGALEQAALDLRQQKIHDEPKSLGSSKFLEQRLSNLETTIHGRSSDD
IALENTATNSGSALALGDETIGRSGGGGADDEGATNLEATIHGKSSDEIA
LGDTAAKSGSALALGGETIDRSRGGDADDESATNLEATIRGRSSDEIALG
DTAANSGSALALSNEKIDRSRGGAADDESATNLRATIRGRSLDEIALGDT
AANSGAALALGDEKIDRSGGGDARDENANGNESVAKRSNIPDCLVRSVSL
LQDQVSSLLEDKRSAELADRLATLETKLVAFGTWEEEAVAQRRQALVRLL
RRAAFLRDMLIAEGITEGQEVTSEEGDTWCNVADEDPAEGREEEMRDETK
AETHDLWLMACERVAWLDAHAVASVPMYDTPCDGNISVDDAFRRSGSSLR
NDQIDREVDGMNTDSPEDSARGSTLVNHIPRANPDDDGHGMMASLEPMEG
SLNEVCPGGDQKGGGGASRDEQNLEILSCWMDAIENRIYQMITDRRNMQL
QMEQARARSASVVVATSTGDSDDQSHTEMIPTSMVMDQISAIQRVIDSID
ERVAVIEGINMDRDVEVSPQATPEGLTAEQAAAFVRKAKEETQSRLIAEM
LALEERVDKRAQEEAKRLRDEREADATRSSMRRVSATVSAYTTDLATRLE
ELQADHEKQGTEVARAAEEIVATDTSVKNLGSELVVLGEVANKMSIAVDD
KADQTDVEALKLAMQKLDATNKAQGASAATREAEALDALQTALNNMSIRM
EGSIQKLQKTQSSAGTIKMKPLLDRVMQELTAAGMLPDPDLGEGAIGRSL
CLSCNRPMNMAMEHRPKTFTSQFRGTLGSRMEHAAFRSPKVEKPAAIWRG
GFRMPASKGNQHDWIRTRTAGRSGATSGQRFSQGGTVMNAQQPPSDFRFG
GESARYDANFVEEKLPGLPNVRDSVRREGRPSSGGIPSSRGTRAVKLRAT
SEAPYRGRFVPGPRAGGSSGTRPIVSNGRRI*
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