prot_A-nodosum_M_contig1016.12.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1016.12.1
Unique Nameprot_A-nodosum_M_contig1016.12.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length611
Homology
BLAST of mRNA_A-nodosum_M_contig1016.12.1 vs. uniprot
Match: A0A6H5L6N1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6N1_9PHAE)

HSP 1 Score: 149 bits (376), Expect = 4.410e-35
Identity = 79/162 (48.77%), Postives = 104/162 (64.20%), Query Frame = 0
Query:  457 LEEGDSLGLEQALRNGPTEMKLMSNGDLVLSFDGVAVWLAQGSKKRRGVLGWIWRKIRRRTTLRQCSKCRFTVTSSGQLEIRERRKLLWSGGLPKRNAKQNKG--------IPEATSRGSASAHAESCLGEVRSTYRLEVTDGGNAVLKLGDSEVVWKALSR 610
            LE+  S+GLE AL NG TE+++M NGDLVL+ +G  VW A+GSKKRR ++GWIWRKIRR+  +R C+ CR TV   G++E+RE  KLLWSGG  ++ A+Q K         +P A  R  A              +RL +TD GNA+L+   SEVVWKAL+R
Sbjct:  365 LEQRRSIGLEDALTNGSTELRVMPNGDLVLADNGRPVWTARGSKKRRSLVGWIWRKIRRQQAVRPCTACRLTVAPEGRVELREEGKLLWSGGQRQKKARQQKRQTTQQRKRVPRANDREGADGSG---------AFRLVITDDGNAILEREGSEVVWKALNR 517          
BLAST of mRNA_A-nodosum_M_contig1016.12.1 vs. uniprot
Match: D7G6H1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6H1_ECTSI)

HSP 1 Score: 118 bits (295), Expect = 1.620e-24
Identity = 178/619 (28.76%), Postives = 233/619 (37.64%), Query Frame = 0
Query:   12 TSAVCAWVVSTAVELSDLHALRAVGYLALSVEALIVTWFWPRLFP-ARRVERSSQRQHRHSHRRRRD-----------DATAQHAISPDSVRSRRGKSVERWGEQDDVSELWSDGGRNNELPSPVHSDGIPALASSRGGRGANKRRITRYNSEANPSTWENLLATRPTAIVGQDSIPAKLPGAKKDGSVTRQTRARVGWVRQTRVSWVRRIFLVLFTLSSTYLATCLFFSGTWNLIPVLGKPPNQGTVFVGVFPGSCGTAECCVVAGTRESGEIGGAKRGEREGVFCREWPKVDDEVRREEETRPRRTVEEARKEDEKERSKHKWEFWGREERGDMPKNGRQDSASDEAAAEDGADVDAAETERERVRLMNEKGREAAAATKVEEKTKTAGTTATPTAEEDVYRRREIAEAERLRKEEFVLSVEHVVARQQGLWERLWGGRKPGKNKGIAPETCSHALEEGDSLGLEQALRNGPTEMKLMSNGDLVLSFDGVAVWLAQGSKKRRGVLGWIWRKIRRRTTLRQCSKCRFTVTSSGQLEIRERRKLLWSGGLPKRNAKQ--------NKGIPEATSRGSASAHAESCLGEVRSTYRLEVTDGGNAVLKLGDSEVVWKALSR 610
            T+   AW   T    SDLH LRA GYL LSVEAL VT++WPRL+P A R    S  +HR  HRR R             AT    I+     +  GK+  RW    D S  W   G    L     S    +L S  GGR   +RR  R  S    S     L   P      ++ P K      DG +      RV    ++R+ + R + +VL TLS++YL T       W L+ +     +   V   V   +        ++ TR+              V  ++  +++   R E E   RR   E                          K  R+  A+ EA                      EK  E A A                             +A RLR+                              K  A       LE+  S+GLE AL NG TE+++M NGDLVL+ +G  VW A+GSKKRR ++GWIWRKIRR+                 Q E+RE  KLLWSGG  ++             K +P A  R  A              +RL VTD GNA+L+   SEVVWKAL R
Sbjct:    3 TAGCMAWARVT----SDLHPLRAAGYLILSVEALTVTFWWPRLYPPAGRKRSESSARHRRQHRRSRHLSRSGSADLFGGATPSPTINGQRSNTNGGKASSRW--SGDSSGWWESEGGLEGLSEAGRSSAPSSLVSI-GGR---RRRAARLQS--GQSGGGGFLGEEPL-----ETFPEKRSAV--DGDM------RVPLPPKSRMRYARPVLIVLLTLSASYLTT-------WLLLSI-----SSARVSTAVDEDA--------MSSTRDI-------------VAMKKGAEMERRTREEREEGARRMELEE-------------------------KALREAVAAKEAXXXXXXXXXXXXXXXXXXXDAEEKRLEEARAXXXXXXXXXXXXXXXXXXXXXXXX---XXQAARLREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKMAA------TLEQTRSIGLEDALSNGSTELRVMPNGDLVLADNGRPVWTARGSKKRRSLVGWIWRKIRRQ-----------------QAELREEGKLLWSGGQRQKXXXXXXXXXXXXRKRVPSANDREGADGS---------DMFRLIVTDDGNAILEREGSEVVWKALDR 503          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1016.12.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L6N1_9PHAE4.410e-3548.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6H1_ECTSI1.620e-2428.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036426Bulb-type lectin domain superfamilyGENE3D2.90.10.10coord: 455..609
e-value: 3.2E-8
score: 35.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 327..347
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 327..363
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1016contigA-nodosum_M_contig1016:238321..255525 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1016.12.1mRNA_A-nodosum_M_contig1016.12.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1016 237168..255705 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1016.12.1 ID=prot_A-nodosum_M_contig1016.12.1|Name=mRNA_A-nodosum_M_contig1016.12.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=611bp
MECFGLMDDPVTSAVCAWVVSTAVELSDLHALRAVGYLALSVEALIVTWF
WPRLFPARRVERSSQRQHRHSHRRRRDDATAQHAISPDSVRSRRGKSVER
WGEQDDVSELWSDGGRNNELPSPVHSDGIPALASSRGGRGANKRRITRYN
SEANPSTWENLLATRPTAIVGQDSIPAKLPGAKKDGSVTRQTRARVGWVR
QTRVSWVRRIFLVLFTLSSTYLATCLFFSGTWNLIPVLGKPPNQGTVFVG
VFPGSCGTAECCVVAGTRESGEIGGAKRGEREGVFCREWPKVDDEVRREE
ETRPRRTVEEARKEDEKERSKHKWEFWGREERGDMPKNGRQDSASDEAAA
EDGADVDAAETERERVRLMNEKGREAAAATKVEEKTKTAGTTATPTAEED
VYRRREIAEAERLRKEEFVLSVEHVVARQQGLWERLWGGRKPGKNKGIAP
ETCSHALEEGDSLGLEQALRNGPTEMKLMSNGDLVLSFDGVAVWLAQGSK
KRRGVLGWIWRKIRRRTTLRQCSKCRFTVTSSGQLEIRERRKLLWSGGLP
KRNAKQNKGIPEATSRGSASAHAESCLGEVRSTYRLEVTDGGNAVLKLGD
SEVVWKALSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036426Bulb-type_lectin_dom_sf