prot_A-nodosum_M_contig1012.8.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1012.8.1
Unique Nameprot_A-nodosum_M_contig1012.8.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length413
Homology
BLAST of mRNA_A-nodosum_M_contig1012.8.1 vs. uniprot
Match: D7G2R5_ECTSI (DUF2040 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2R5_ECTSI)

HSP 1 Score: 336 bits (862), Expect = 4.760e-109
Identity = 228/395 (57.72%), Postives = 269/395 (68.10%), Query Frame = 0
Query:    1 MRKSGLKFGLIGSASSLKK-------EGGKAKPIGSKPPPRRRPAGATAVFDVDSDEDREPQE-DPRGVAAVNKRLSAISAKQERQAKKDFEDALQADPSVFDYDGVYDGMKNSQESKVAAATVSREKEKRQPKYIGNLLKQAKVRALESDRIFERKLQKEREEQDKVEGEATMKFVTSAYKKKLVEQRKWELQQRLEDEKEQRQDVTNKGMDGFYSSLITKNIAMGGGGEKSASLAASRTEPNRQGGAGNDEVHRGGSGEKA------------------GAGHERATDDNKEGVDGGVGSTSKADSNLEGDDGPTAKMVDPRATAANVKEDRNPRDDEASAAQASSAFSENAEDGEE-DGARKRARVEATAGGAPEYGETREVLEAGRGDDGG 368
            MRKSG+KFGLIG+ASSLKK         G+ +PIGSKP PRRRPAG+T+VFD +SD++ E  + D  GV AVNKRL+AISAKQE+QAKK++EDALQADPSVFDYD VYDGMK S+ESKVAAATV+REKEKRQPKYIGNLLKQAK+RA+ESDRIF+RKLQKERE QDK+EGEATMKFVTSAYKKKL+EQ+KWELQQ+LEDE+EQR DVT  GM GFYS+LITKNIAMGG  EKSA+ A +         A  DE       E+A                  G     A+   +EG DGG   +S   ++  G  GPTA+MVDPRA      E +  R DEA    +  +     + GE  D   KRAR+   AG A + G+      A  GDDGG
Sbjct:    1 MRKSGVKFGLIGTASSLKKGSSSAAGAAGRGRPIGSKPAPRRRPAGSTSVFDANSDDEEEDSKGDLSGVTAVNKRLAAISAKQEKQAKKEYEDALQADPSVFDYDRVYDGMKESRESKVAAATVAREKEKRQPKYIGNLLKQAKMRAVESDRIFDRKLQKEREAQDKLEGEATMKFVTSAYKKKLMEQKKWELQQQLEDEREQRNDVTKTGMGGFYSNLITKNIAMGGDVEKSANSAFTAGSKRH---AATDEYEMQDGNEQAXXXXXXXXXXXXXXXXXEGGPANGASQGGREGRDGGDADSSPGRTDESG--GPTARMVDPRAG-----EQKKSRRDEAGVRDSERSGRRRGDSGEAVDNVAKRARL---AGEASDGGD------ASVGDDGG 376          
BLAST of mRNA_A-nodosum_M_contig1012.8.1 vs. uniprot
Match: A0A835YZI8_9STRA (Coiled-coil domain-containing protein 55-domain containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZI8_9STRA)

HSP 1 Score: 175 bits (443), Expect = 1.150e-48
Identity = 115/223 (51.57%), Postives = 150/223 (67.26%), Query Frame = 0
Query:    7 KFGLIGSASSLKKEGGKAKPIGSKPPPRRRPAG--ATAVFDVDSDEDREP-QEDPRGVAAVNKRLSAISAKQERQAKKDFEDALQADPSVFDYDGVYDGMKNSQESKVAAATVSR--EKEKR-QPKYIGNLLKQAKVRALESDRIFERKLQKEREEQDKVEGEATMKFVTSAYKKKLVEQRKWELQQRLEDEKEQRQDVTNK---GMDGFYSSLITKNIAMGG 220
            ++GL+G+A +LK +   AK   +   PR+ PA   A A F  DSD D     EDP   AAVN+RL+A  A++ R+ +K    A+  DPSVFDYDGVYD +   ++ K AAA  +R  +K KR QP+YIGNLL+QAK+R +E DR+++RKL KEREE DK  G A MKFVTSAYK KL+EQ+KWE+ Q  E E+E + +   K   GM  FYS+L+TKNIAMGG
Sbjct:    3 RYGLLGNAKTLKAQSVAAKTAKA---PRKAPARGPAVAAFGDDSDSDGGAGAEDPTSRAAVNRRLAAEQAERARRMEKVAVQAVMDDPSVFDYDGVYDEVSKGRDDKAAAAAAARGNDKTKRLQPRYIGNLLEQAKLRTVEQDRVYDRKLAKEREEGDKEFGAAEMKFVTSAYKAKLMEQKKWEVAQEREAEREAQAEADMKRGGGMTAFYSNLLTKNIAMGG 222          
BLAST of mRNA_A-nodosum_M_contig1012.8.1 vs. uniprot
Match: A0A8K1FKC2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FKC2_PYTOL)

HSP 1 Score: 128 bits (321), Expect = 4.190e-30
Identity = 96/225 (42.67%), Postives = 135/225 (60.00%), Query Frame = 0
Query:    4 SGLKFGLIGSASSLKKEGGKAKPIGSKPPPRRRPAGATAVFDVDSDEDREP---QEDPRGVAAVNKRLSAISAKQERQAKKD--FEDALQADPSVFDYDGVYDGMKNSQESKVAAATVSREKEKRQPKYIGNLLKQAKVRALESDRIFERKLQKEREEQDKVEGEATMKFVTSAYKKKLVEQRKWELQQRLEDEKEQRQDVTNKG---MDGFYSSLITKNIAMGG 220
            SG ++GLI S     K+GGK + +        +PA     FD  ++    P   Q DPR      +R+   +A+  +QA  D   E AL  DPSVFDYDGVYD +++S++ KV+     RE EK Q KYIG L+++AKVR +E DR+ ER+L KERE  D   G+   K ++++YK+KL E ++W+ +    D KE  +DVT +G   M GFYS+L+TKNIAMGG
Sbjct:   16 SGKQYGLIVS----NKKGGKKELL--------KPASVFGGFDDANEATTTPGDAQMDPR------RRVVHEAARSVQQALVDRLHEKALAEDPSVFDYDGVYDEIQSSRQDKVSRRKAQRETEKAQSKYIGTLMEKAKVREIELDRVRERRLLKEREADDAQYGDKE-KLISASYKRKLQEMKRWDEEDARLDAKEAAEDVTKRGNEAMVGFYSNLLTKNIAMGG 221          
BLAST of mRNA_A-nodosum_M_contig1012.8.1 vs. uniprot
Match: A0A7S1XVS8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XVS8_9STRA)

HSP 1 Score: 122 bits (307), Expect = 8.900e-29
Identity = 74/137 (54.01%), Postives = 100/137 (72.99%), Query Frame = 0
Query:   86 ALQADPSVFDYDGVYDGMKNSQESKVAAATVSREKEKRQPKYIGNLLKQAKVRALESDRIFERKLQKEREEQDKVEG--EATMKFVTSAYKKKLVEQRKWELQQRLEDEKEQRQDVTNKGMDGFYSSLITKNIAMGG 220
            AL  D SVFDYDGVYD M ++++S  AAA  + E+++R+ KY  NLLKQA++R L+SDRI+ERKL++E  E  ++ G  +   KFV +AY+K+L E+  WE  +R E E+E R DVT  GM GFYS+L+TKNIAMGG
Sbjct:    4 ALTEDASVFDYDGVYDSMTSARDS--AAAAQASERKERKSKYTENLLKQAQMRKLQSDRIYERKLRREAAEVAEMHGGVKDEDKFVGAAYRKQLEEREAWEKAEREEAEREARNDVTKTGMMGFYSNLLTKNIAMGG 138          
BLAST of mRNA_A-nodosum_M_contig1012.8.1 vs. uniprot
Match: A0A7S3HBP6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HBP6_9STRA)

HSP 1 Score: 123 bits (308), Expect = 5.280e-28
Identity = 76/190 (40.00%), Postives = 116/190 (61.05%), Query Frame = 0
Query:   31 PPPRRRPAGATAVFDVDSDEDREPQEDPRGVAAVNKRLSAISAKQERQAKKDFEDALQADPSVFDYDGVYDGMKNSQESKVAAATVSREKEKRQPKYIGNLLKQAKVRALESDRIFERKLQKEREEQDKVEGEATMKFVTSAYKKKLVEQRKWELQQRLEDEKEQRQDVTNKGMDGFYSSLITKNIAMGG 220
            PP + +P    ++FD D  +     ED   V+    R++A  A++    ++    A  A+P ++DYDG YD  K  +++K   +     K+  + +Y+ NLL  +K+R  E +R+FE+ L KER+ +D   G+   KFVT+AYKKKL+E +KWE + RL DE EQR DV   GM+GFY++L+TKN+AMGG
Sbjct:   22 PPAQIKPR--LSMFDRDDSD-----EDSSAVSNDVSRVNAQLARRNAILEQTMSAAASAEPDIYDYDGAYDSFKAKEQAKHQLSQPIATKDAPKARYVNNLLATSKMREKEKERVFEKNLLKERKVEDAEFGDKD-KFVTAAYKKKLLEDKKWEYEDRLADEVEQRTDVRKSGMEGFYANLLTKNVAMGG 203          
BLAST of mRNA_A-nodosum_M_contig1012.8.1 vs. uniprot
Match: A0A662Y6L8_9STRA (DUF2040 domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y6L8_9STRA)

HSP 1 Score: 120 bits (302), Expect = 1.450e-27
Identity = 77/171 (45.03%), Postives = 109/171 (63.74%), Query Frame = 0
Query:   68 LSAISAKQERQAKKDFEDALQADPSVFDYDGVYDGMKNSQESKVAAATVSREKEKRQPKYIGNLLKQAKVRALESDRIFERKLQKEREEQDKVEGEATMKFVTSAYKKKLVEQRKWELQQRLEDEKEQRQDVTNKG---MDGFYSSLITKNIAMGGGGEKSASLAASRTEP 235
            L A  + Q+ Q ++    AL  DPSVFDYD VYD MK++++S+V    V RE EK+QPKYIG LL QAK+R +E++RI ER+L  ER+  D + G+   K V+++YK+KL E ++W+ +       E R DVT +G   M GFY++L  KNIAMGG    + S   ++ EP
Sbjct:   45 LEAARSLQQSQVERTRAQALADDPSVFDYDAVYDDMKSARQSEVTKRAVQREAEKKQPKYIGTLLAQAKIREVENERIRERRLLHERKADDALYGDKE-KLVSASYKRKLQEMKRWDEEDARLANLEDRDDVTKQGEHAMAGFYANL-NKNIAMGGSTANARSAYTAKEEP 213          
BLAST of mRNA_A-nodosum_M_contig1012.8.1 vs. uniprot
Match: A0A1V9ZKX0_9STRA (DUF2040 domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZKX0_9STRA)

HSP 1 Score: 119 bits (299), Expect = 2.750e-27
Identity = 76/153 (49.67%), Postives = 105/153 (68.63%), Query Frame = 0
Query:   78 QAKKDFEDALQADPSVFDYDGVYDGMKNSQESKVAAATVSREKEKRQPKYIGNLLKQAKVRALESDRIFERKLQKEREEQDKVEGEATMKFVTSAYKKKLVEQRKWELQQRLEDEKEQRQDVTNKG---MDGFYSSLITKNIAMGGGGEKSAS 227
            +A++  ++AL +DP+VFDYDGVYD M+  +  + AA  V       Q KYI  LL++AK+R +E DRI ER+L KEREE DK+ G+ T KF+TS+YK+KL+E ++WE +     E E  QDVT +G   M GFY++L+T NIAMGG  EK+ S
Sbjct:   59 KAERAVQEALASDPNVFDYDGVYDSMQAERVKQKAAKKVEGVP---QSKYINVLLEKAKIREIEHDRIRERRLLKEREEDDKLHGD-TEKFITSSYKRKLMEAKRWEEEDARLAEIEAAQDVTKRGELGMAGFYANLLTNNIAMGGTIEKATS 207          
BLAST of mRNA_A-nodosum_M_contig1012.8.1 vs. uniprot
Match: A0A7S4E5L4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E5L4_9STRA)

HSP 1 Score: 117 bits (293), Expect = 4.080e-26
Identity = 73/165 (44.24%), Postives = 103/165 (62.42%), Query Frame = 0
Query:   64 VNKRLSAISAKQERQAKKDFEDALQADPSVFDYDGVYDGMKNSQESKVAAATVSREKEKRQP--KYIGNLLKQAKVRALESDRIFERKLQKEREEQDKVEGEATMKFVTSAYKKKLVEQRKWELQQRLEDEKEQRQDVTNKGMDGFYSSLITKNIAMGGGGEKSA 226
            V +++  + A Q ++A      A   DPS++DYDGVYD MK  +  K++A +        +P  +YIG+L + AKVR  E DR++ER+L KE +EQDK     T +FVT+AYKK+L E RKW+ + R  DE E+R      GM GFYS+L+T+NIA G   EK+A
Sbjct:   52 VAQQMRDLGAAQRKRAXXQAAQAAAVDPSIYDYDGVYDQMKEDERKKISARSGLSNTNHSKPGARYIGSLKQAAKVREREFDRVYERQLLKE-QEQDKDTYGDTERFVTAAYKKQLQESRKWDAEDRRMDEVEERTSAQTSGMAGFYSNLLTRNIAAGADVEKAA 215          
BLAST of mRNA_A-nodosum_M_contig1012.8.1 vs. uniprot
Match: D5AE85_PICSI (DUF2040 domain-containing protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=D5AE85_PICSI)

HSP 1 Score: 117 bits (292), Expect = 5.730e-26
Identity = 75/182 (41.21%), Postives = 111/182 (60.99%), Query Frame = 0
Query:   70 AISAKQERQAKKDFEDALQADPSVFDYDGVYDGMKNSQESKVAAATVSREKEKRQPKYIGNLLKQAKVRALESDRIFERKLQKEREEQDKVEGEATMKFVTSAYKKKLVEQRKWELQQRLEDEKEQRQDVTNKG-MDGFYSSLITKNIAMGGGGEKS-ASLAASRTEPNRQGGAGNDEVHRG 249
            A   K  R  ++  ++AL+ DPS+FDYDGVYD MK        A  +  ++ KR+PKYIG L+++AK+R  E + ++ER+L KER ++D +  +   KFVT+AYKKKL EQ KW  ++RL + +E+  DVT K  M  FY +L+ KN+A G    K+  ++  SR     +G A   E+H G
Sbjct:   47 ASKKKSHRDVEQQHKEALEQDPSIFDYDGVYDEMKGK-----TARPLQEDRIKREPKYIGKLMEKAKIRQQEQEIVYERQLAKERNKEDHLYADKE-KFVTAAYKKKLAEQAKWLEEERLRELREEANDVTKKSDMSDFYRNLLKKNVAFGANSSKTEVAVMPSRQHVESEGKAQPSELHLG 222          
BLAST of mRNA_A-nodosum_M_contig1012.8.1 vs. uniprot
Match: A0A1W0A4N0_9STRA (DUF2040 domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A4N0_9STRA)

HSP 1 Score: 115 bits (289), Expect = 7.080e-26
Identity = 73/163 (44.79%), Postives = 109/163 (66.87%), Query Frame = 0
Query:   68 LSAISAKQERQAKKDFEDALQADPSVFDYDGVYDGMKNSQESKVAAATVSREKEKRQPKYIGNLLKQAKVRALESDRIFERKLQKEREEQDKVEGEATMKFVTSAYKKKLVEQRKWELQQRLEDEKEQRQDVTNKG---MDGFYSSLITKNIAMGGGGEKSAS 227
            + A+ AK   +A++  ++AL +DP+ FDYD VYD ++  +  +  A  ++      Q KYIG L+++AKVR +E DRI ER+L KEREE DK+ G+   KF+TS+YK+KL+E ++WE +     + E+ QDVT +G   M GFY++L+T NIAMGG  EK+ S
Sbjct:   50 MQAVVAKS--KAERAVQEALASDPNAFDYDDVYDSIQAQRTKQKEAKKINNAP---QSKYIGVLMEKAKVREIEHDRIRERRLLKEREEDDKLHGDKE-KFITSSYKRKLMEAKRWEEEDARLAKLEEAQDVTKRGQLGMAGFYANLLTNNIAMGGNMEKATS 206          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1012.8.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2R5_ECTSI4.760e-10957.72DUF2040 domain-containing protein n=2 Tax=Ectocarp... [more]
A0A835YZI8_9STRA1.150e-4851.57Coiled-coil domain-containing protein 55-domain co... [more]
A0A8K1FKC2_PYTOL4.190e-3042.67Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S1XVS8_9STRA8.900e-2954.01Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S3HBP6_9STRA5.280e-2840.00Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A662Y6L8_9STRA1.450e-2745.03DUF2040 domain-containing protein n=2 Tax=Nothophy... [more]
A0A1V9ZKX0_9STRA2.750e-2749.67DUF2040 domain-containing protein n=1 Tax=Achlya h... [more]
A0A7S4E5L4_9STRA4.080e-2644.24Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
D5AE85_PICSI5.730e-2641.21DUF2040 domain-containing protein n=1 Tax=Picea si... [more]
A0A1W0A4N0_9STRA7.080e-2644.79DUF2040 domain-containing protein n=1 Tax=Thrausto... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 175..202
NoneNo IPR availableCOILSCoilCoilcoord: 384..404
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..60
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..62
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 300..314
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 183..200
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 247..268
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 356..372
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 183..386
NoneNo IPR availablePANTHERPTHR30060INNER MEMBRANE PROTEINcoord: 24..410
NoneNo IPR availablePANTHERPTHR30060:SF0COILED-COIL PROTEIN (DUF2040)-RELATEDcoord: 24..410
IPR018612Nuclear speckle splicing regulatory protein 1, N-terminalPFAMPF09745DUF2040coord: 80..201
e-value: 4.3E-33
score: 113.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1012contigA-nodosum_M_contig1012:82290..88327 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1012.8.1mRNA_A-nodosum_M_contig1012.8.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1012 82290..88327 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1012.8.1 ID=prot_A-nodosum_M_contig1012.8.1|Name=mRNA_A-nodosum_M_contig1012.8.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=413bp
MRKSGLKFGLIGSASSLKKEGGKAKPIGSKPPPRRRPAGATAVFDVDSDE
DREPQEDPRGVAAVNKRLSAISAKQERQAKKDFEDALQADPSVFDYDGVY
DGMKNSQESKVAAATVSREKEKRQPKYIGNLLKQAKVRALESDRIFERKL
QKEREEQDKVEGEATMKFVTSAYKKKLVEQRKWELQQRLEDEKEQRQDVT
NKGMDGFYSSLITKNIAMGGGGEKSASLAASRTEPNRQGGAGNDEVHRGG
SGEKAGAGHERATDDNKEGVDGGVGSTSKADSNLEGDDGPTAKMVDPRAT
AANVKEDRNPRDDEASAAQASSAFSENAEDGEEDGARKRARVEATAGGAP
EYGETREVLEAGRGDDGGRKGTEVATGENITEEAEKAAVAKARKEAAIKA
ARERFLSRKKGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018612NSRP1_N