prot_A-nodosum_M_contig101.20.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig101.20.1
Unique Nameprot_A-nodosum_M_contig101.20.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length226
Homology
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BLAST of mRNA_A-nodosum_M_contig101.20.1 vs. uniprot
Match: D7G086_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G086_ECTSI)

HSP 1 Score: 129 bits (325), Expect = 7.810e-31
Identity = 64/85 (75.29%), Postives = 75/85 (88.24%), Query Frame = 0 
Query:  142 PLFPGSSGDARGLRKMLELPARGVTVLCVDPPASYTGEAFLRSALLGRAATVHIHAGEGDGDLAACLARSLGIQFMSAKLQLSAL 226
            PL+PGSS DAR LR++L  PA GVTVLCVDPPASYTG+AF+RSALLGRAATVH+ AGEG G LA+CLAR LG++FM+ KLQ+SAL
Sbjct:    4 PLYPGSSADARALREVLSRPASGVTVLCVDPPASYTGDAFVRSALLGRAATVHVQAGEGYGSLASCLARGLGVEFMAIKLQMSAL 88
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BLAST of mRNA_A-nodosum_M_contig101.20.1 vs. uniprot
Match: A0A6H5JKL7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKL7_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 6.750e-30
Identity = 62/81 (76.54%), Postives = 71/81 (87.65%), Query Frame = 0 
Query:  142 PLFPGSSGDARGLRKMLELPARGVTVLCVDPPASYTGEAFLRSALLGRAATVHIHAGEGDGDLAACLARSLGIQFMSAKLQ 222
            PL+PGSS DAR LR+ML  PA GVTVLCVDPPASYTG+AF+RSALLGRAATVH+ AGEG G LA+CLAR LG++FM+ KLQ
Sbjct:    4 PLYPGSSADARALREMLSRPASGVTVLCVDPPASYTGDAFVRSALLGRAATVHVQAGEGYGSLASCLARGLGVEFMAIKLQ 84
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig101.20.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G086_ECTSI7.810e-3175.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JKL7_9PHAE6.750e-3076.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig101contigA-nodosum_M_contig101:382024..391648 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig101.20.1mRNA_A-nodosum_M_contig101.20.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig101 381832..391648 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig101.20.1 ID=prot_A-nodosum_M_contig101.20.1|Name=mRNA_A-nodosum_M_contig101.20.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=226bp
MYSASLRRAGAVSRLRAIRRLRVVRPLHHRAPERATQRRTTGVRGFCDQP
KSATTAAAEGAEAAWRSARSKFERWARVPSASSVAGAVALVPVVGGAWLV
TVYALRQQLCEHRLQQVEGDGSAGLRRRIRNAEGGSGRGQLPLFPGSSGD
ARGLRKMLELPARGVTVLCVDPPASYTGEAFLRSALLGRAATVHIHAGEG
DGDLAACLARSLGIQFMSAKLQLSAL
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