prot_A-nodosum_M_contig1008.2.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1008.2.1
Unique Nameprot_A-nodosum_M_contig1008.2.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length291
Homology
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BLAST of mRNA_A-nodosum_M_contig1008.2.1 vs. uniprot
Match: D8LD29_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD29_ECTSI)

HSP 1 Score: 217 bits (552), Expect = 3.380e-64
Identity = 141/294 (47.96%), Postives = 175/294 (59.52%), Query Frame = 0 
Query:   31 RLAVKAYRDAYLAVKLSQVQEGTGRGAVLGPPGGDAKAVGLLAEMESEEWGKGLLTESNRSAARVKADSYLALLAKCK--ASEEAARYGGMSKMLQGFAGGREGGIKGGGTAAG---------GMMEALVSGAG------------------------GAIGGGAGSVPDKEQMVKMAKKMTLVVKKQLREPSTQHLVCSFLKKAEPDTVKSLADAVGVP-VNEGLATRVSKYLKGADGKTLESWIDLGEIAAGVFRRLSQLSVLWSRGIALAGVWLVWVWLRACFAPILLTEA 288
            RLA +AYRDAYL+V+LS        G   GP  GDAKA+GL+AEME+ +WG+G LTE++RSAAR KAD +L  LA     A    A  GG+  M  G            G             G+M+ + +G G                          +GGGA   PD +QM+KMAKKM+  VKKQLR P TQ +VC+FL +A+P+T+ SLA   G P  NE +   +S YL+ ADGKTLESWID GEIA   FRRL Q SVLWSRGIALAG+WLVWVW+RACFAPI++ +A
Sbjct:  152 RLAQRAYRDAYLSVELSN------DGGAAGPAAGDAKALGLMAEMEAGDWGQGWLTEADRSAARSKADKHLTALASMAPPARSTPAGSGGLFDMFGGGXXXXXXXXXXXGXXXXXXXXLXXXPGLMDMMGAGTGXXXXXXXXXXXXXXXXLMGXXXAKSGLGGGADG-PDPKQMLKMAKKMSKGVKKQLRNPGTQQMVCAFLNQAKPETLMSLATTAGFPGANEAIVNGLSGYLQKADGKTLESWIDYGEIATCAFRRLKQFSVLWSRGIALAGIWLVWVWVRACFAPIVVQKA 438
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1008.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LD29_ECTSI3.380e-6447.96Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1008contigA-nodosum_M_contig1008:52555..69303 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1008.2.1mRNA_A-nodosum_M_contig1008.2.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1008 51968..70032 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1008.2.1 ID=prot_A-nodosum_M_contig1008.2.1|Name=mRNA_A-nodosum_M_contig1008.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=291bp
METDKKAEVTAGGEGEGEGEGGEAVKGERLRLAVKAYRDAYLAVKLSQVQ
EGTGRGAVLGPPGGDAKAVGLLAEMESEEWGKGLLTESNRSAARVKADSY
LALLAKCKASEEAARYGGMSKMLQGFAGGREGGIKGGGTAAGGMMEALVS
GAGGAIGGGAGSVPDKEQMVKMAKKMTLVVKKQLREPSTQHLVCSFLKKA
EPDTVKSLADAVGVPVNEGLATRVSKYLKGADGKTLESWIDLGEIAAGVF
RRLSQLSVLWSRGIALAGVWLVWVWLRACFAPILLTEAKA*
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