prot_A-nodosum_M_contig1007.3.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1007.3.1
Unique Nameprot_A-nodosum_M_contig1007.3.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length346
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1007.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 99..283
e-value: 1.3E-54
score: 187.5
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 1..95
e-value: 1.7E-28
score: 101.3
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 174..232
e-value: 1.2E-6
score: 28.2
NoneNo IPR availablePANTHERPTHR48054:SF26LEUCINE-RICH REPEAT PROTEIN 1coord: 119..192
coord: 1..72
NoneNo IPR availablePANTHERPTHR48054RECEPTOR KINASE-LIKE PROTEIN XA21coord: 70..165
coord: 119..192
NoneNo IPR availablePANTHERPTHR48054RECEPTOR KINASE-LIKE PROTEIN XA21coord: 46..120
coord: 153..263
NoneNo IPR availablePANTHERPTHR48054:SF26LEUCINE-RICH REPEAT PROTEIN 1coord: 70..165
coord: 46..120
coord: 153..263
NoneNo IPR availablePANTHERPTHR48054RECEPTOR KINASE-LIKE PROTEIN XA21coord: 1..72
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 2..268

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1007contigA-nodosum_M_contig1007:17201..46149 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1007.3.1mRNA_A-nodosum_M_contig1007.3.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1007 17201..46149 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1007.3.1 ID=prot_A-nodosum_M_contig1007.3.1|Name=mRNA_A-nodosum_M_contig1007.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=346bp
GNLEALVYLGLENNRLTGPIPSELGNIVTLITLGLDNNQLSGPIPPELGK
LEALNDLWLSNNRLTGPIPPELGKLEALVDLCLEKNGLTGPIPPELGKLE
ALVRLCLERNGLTGPIPSSLGNLKVLQLLSLEDNQLSGPIPSELGNIATL
ITLGLDNNQLSGPIPPELGKLEALVYLWLDFNRLTGPIPSSLGNLKVLQR
LSLKNNQLSGPIPPELGKLEALVHLSLRNNGLTGSVPVQLVNLVSLQAIN
FSGNELSGPLPSYSQLKKLCIALGCSDYRHGDLLQRGATAKMTEITEGIT
DEETEEMSLRKPGLSAMRTGYAVTERAPRTVAERTADFDGEVMAWS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt