prot_A-nodosum_M_contig1006.5.4 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1006.5.4
Unique Nameprot_A-nodosum_M_contig1006.5.4
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length1429
Homology
BLAST of mRNA_A-nodosum_M_contig1006.5.4 vs. uniprot
Match: D7G8X5_ECTSI (Similar to Fe65 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8X5_ECTSI)

HSP 1 Score: 313 bits (801), Expect = 2.770e-84
Identity = 510/1455 (35.05%), Postives = 633/1455 (43.51%), Query Frame = 0
Query:   51 AAGSPVSSAAADATEDAVLNLPSGWQQCMDSSGAIYFWNVDSGETTWEMPAGAIYRRKESLAPDSSALSSSGDAAG-TPKQVATGAAERDRVASDATSDTASEPDEGE-------DEDGGVKRSADIAP---------ATLVSSATAENDKXXXXXXXXXXXXNTPLSSA-AELDRTGGKSRSRKVGDGDQGANEER---------SVADDVAQAAAGLSCVDDLLAGIEAEMLSGTGDGGGN--------RGAGDADKGDKDPTEEIDSAKEDFSPLRAISSGLDVRAQQSYAELVASFA-AAEGEGGDVGRQA-DGMDVKRRLALELGAVLRARLSDWREGG-LDGAFLVRKLEEMAVQARSSLLYDRATTESTQTDDVPPAVDVSSDGACIAASTAVDSSKSFGGVAPPSEAGDNMPVDQERATLQKAAPKRNKSKEKSKKGRRLGSGLIQSNSVINGKKKDNEGKAASENREGGSEGNEDSCHAPVDAASKNGSTVAPGAKTTEALREAETIEKLRWADEVSAAXXXXXXXXXXXXK------EAEARERAVXXXXXXXXXXXXXXXXXXXXXXXXAVDGQASSPPRQQG-----------------DGDGHQDEMVPSVGDESREEGEIVVLPKAPDISEPVGRASEGEVSVSLSQNDAKEKNNDGDRTVGARPIGAPSAKHVVASEAGMAPVVNSLLP---SGWAVVWDDLHGANYYHNLATNETTWVLPSTRATEAPRASPAEEDPPAPSPPSPNGVKIPTGSVSRETSPEGGKGERRXXXXXXXXXXXXXXXXXXQTGDE-------------QAGDSSPTRGRGDMKKTTTLEQEISTEGNGSSAASTKASPTDKISIGEKEKAASAEPGARRAAEELPRLVVWRSQPRTWARPGVRYAGGAIDLRKFLRKNRRRLPPGTEGRRALLSISHFGWNSHGASMPSASLRDPRPRASRSLTASRPDGVPGSGKLTVELEMFMHFSREGECHEERTRPLFRRSDRLRACQPEDAFVVRVEGKVSEQTRRCATRLSRFRRQLVKMSLTLPAPSPSVPRPLSAFVRLPCPGTRAFPLTWQCYLPPRVSSSKRLGRGGIRSPWAAVWDKIQNAYYYHNTETNETTWVRPSASAVEEKRVVEDGVTPKISQEKNPTQDENIENVSHTALDSDPASQAPSASASGAVDMRPSTLVWWSDAGDVWNGESLSGLLLGYGPRRYRNLGGGYYMITLGSGPEWAAAAVAALGQGVADPVAEARVDWICCTASAPGYGLFLRWAGDDDEQKLFDVPDELFDDPPPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSVGSISKKRKGAASLIDKWKAVASTAGEEAEREAERQEKMERWKARAAALDPDNPNFMPLGRKRR 1428
            A+ S VS+      E     LP+GWQQCMD++G +YFWN ++G+T+W+ P G    RK S A  SSA+ +  +A    P+ VA  A+      SDATSDTASE +E +        ED G  R                + V   T E +K              P  S  +  DR   + R R    G++   EE          + + DV  AA   + +DDLLAGIEAE+L G GDG G+        +G+   + GD   T E    +EDF+PL+ ++ GLDVRAQ+++AEL A  A AAEG+G + G    +  D   RL +EL AVLRARLSDWR+G  +DG        E A+ A SS    R          V P+V + +                              P  Q R    K                RLG                                                S+  P   + +A+R A   EKL+WADEVSAA XXXXXXXXXXX       +AE+  +                          A    A+S  R+                   D  G  D          +E+GE+ V+P A          +EG  + S +++DA                  PS      SE+G+    +  LP   SGW+ V+D  H A YYHNL T+ET+WVLP+T A     + PA                    S + E     G GERR                    GDE              AG S  T+    ++K ++  ++++     S AAS++AS  +K +      AA+ E  +    E L R+        TW                                  +   +H  +  H       S  DP                                                                   G   +++                     P+P PS   P +                         S               A   K  +A     TE +  T   P+ASA                                       A++AP+ S    VD+RP TLVWWSDAGDVWNG SLSGLL GYGPRRYRNLGGGYYM TL  GPEWA AAVAALGQGVADPVA AR+DW+ CTASAPGYGLFLR++G+DDEQKLFDVPDE FD     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        S GSI KKRKGAA+LIDKWKAVASTAGEEAE+EAE+QEKMERWKARAAA+DPDNPNF P+G++RR
Sbjct:   86 ASASSVSTPDPSPAESVTYTLPTGWQQCMDNAGLVYFWNTETGDTSWDPPEGT--ERKVSKA--SSAVDTPSEAPPIVPEAVADAASREAPAGSDATSDTASEAEEDKAVAXXXXXEDEGASRXXXXXXXXXXXXXXXVSEVCVDTEEVEKGAVSGEQEVADSAIPKRSPRSATDRPAAQDR-RMAAVGEEQKGEEELPQQSKSTGTGSSDVPVAA--TAGIDDLLAGIEAELLLGAGDGEGDLDGDKDEVKGSAVEENGDTRATGE----EEDFAPLQEVAPGLDVRAQEAHAELAALLAVAAEGKGEEAGLSVVEATDPSVRLGIELAAVLRARLSDWRQGECMDGI-------EAALTAPSSFSSSRRWRWRL----VQPSVRLLA------------------------------PQHQRRPDSLKV---------------RLGR-----------------------------------------------SSPLPLMSSPQAVRAARNAEKLKWADEVSAAAXXXXXXXXXXXXXXXXXAKAESEAKVAVIGTVEEGVTDSEGSNSDRRGKHAASGDDATSDKRKNATSTDTLATARAIVEGTIDLGGVGDXXXXXXXXXXKEDGEVTVVPAA----------TEGGAATSGAKDDA------------------PSVPAPDTSESGIVIAKDPTLPDVPSGWSAVFDTTHQAYYYHNLTTDETSWVLPATVA----ESHPAXXXXXXXXXXXXXXXXXSKKSKADEGDASTGGGERRSESSNRSRRRG-------SPGDEXXXXXXXXXXXSNSAGKSVETK----LEKRSSRRRDVA-----SGAASSEASQDEKPAPAASTDAAAKEGDSASIPESLSRI-----DNSTWV--------------------------------PVWDDNHQAFYYHDTVTDETSW-DPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------XXXXXXXXXXXXXXXXTPGGAQQRS---------------------PSPEPSTASPNAE------------------------SXXXXXXXXXXXXXVTADAPKAHSA-----TEEDVATAATPAASAA--------------------------------------AAEAPTTSV---VDLRPCTLVWWSDAGDVWNGVSLSGLLGGYGPRRYRNLGGGYYMTTLERGPEWATAAVAALGQGVADPVAAARMDWVSCTASAPGYGLFLRFSGEDDEQKLFDVPDEYFDXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGSSATGKSGGSIGKKRKGAANLIDKWKAVASTAGEEAEKEAEKQEKMERWKARAAAMDPDNPNFTPIGKRRR 1237          
BLAST of mRNA_A-nodosum_M_contig1006.5.4 vs. uniprot
Match: A0A6H5JJN1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJN1_9PHAE)

HSP 1 Score: 174 bits (441), Expect = 2.430e-40
Identity = 270/806 (33.50%), Postives = 352/806 (43.67%), Query Frame = 0
Query:    1 MGLVYYGSDSDEEGSSDRDGSSPTGSAAKTNEDRGVGLXXXXXXXXXAAEAAGSPVSSAAADATEDAVLNLPSGWQQCMDSSGAIYFWNVDSGETTWEMPAGAIYRRKESLAPDSSALSSSGDAAG-TPKQVATGAAERDRVASDATSDTASEPDE-------GEDEDGGVKRSADI------APATLVSSATAENDKXXXXXXXXXXXX--------NTPLSSA---AELDRTGGKSRSRKVGDGDQGANE----ERSV---ADDVAQAAAGLSCVDDLLAGIEAEMLSGTGDGGGNRGAGDADKGDKDPTEEIDSAK-----EDFSPLRAISSGLDVRAQQSYAELVASFA-AAEGEGGDVGRQA-DGMDVKRRLALELGAVLRARLSDWREG---------GLDGAFLVRKLEEMAVQARSSL------LYDRATTESTQTDDVPPAVDVSSDGACIAASTAVDSSKSFGGVA--PPSEAGDNMPVDQERATLQKAAPKRNKSKEKSKKGRRLGSGLIQSNSVINGKKKDNEGKAASENREGGSEGNEDSCHAPVDAASKNGSTVAPGAKTTEALREAETIEKLRWADEVSAAXXXXXXXXXXXXKEAEARERAVXXXXXXXXXXXXXXXXXXXXXXXXAVDGQASSPPRQQGDGDGHQDEMVPSVGDESREEGEIVVLPKAPDISEPVGRASEGEVS----------VSLSQNDAKEKNNDGDRTVGARP----IGAPSAKH---VVASEAGMAPVVNSLLPSGWAVVWDDLHGANYYHNLATNETTWVLPSTRATEAPRAS 733
            MGL++YGSDS+EE                                     A+ S VS+      E     LP+GWQQCMD++G +YFWN ++G+T+W+ P G     +  ++  SSA+ +  +A    P+ VA  A+      SDATSDTASE +E       G   D G  R++        A A  VS    + ++                     +P S+A   A  DR     R   VG+  +G  E     +S    + DV  AA   + +DDLLAGIEAE+L G GDG G    GD D+      EE    +     +DF+PLR ++ GLD RAQ+++AEL A  A AAEG+G + G       D   RL +EL AVLRARLSDWR+G         GLDG F V KLEEMA +ARS+L         RAT +S       P +  S D     A  AV S+ S   VA  PP +A +             A     KSK  SKK  R+     ++ S  NG     E  +     +G +EG   S HA  D AS   ST +       A+R A   EKL+WADEVSA XXXXXXXXXXXX          XXXXXXX                   D Q S+  R++     H      +  D+         L  A  I E  G    G V                            T GA+     + AP  +    V+A +  +  V     PSGW+ V+D  H A YYHNL T+ET+WVLP+T A   P  S
Sbjct:   62 MGLLHYGSDSEEE------------------------------EPPAQKPASASSVSTPDPSPAESLTYTLPTGWQQCMDNAGLVYFWNTETGDTSWDPPEGT----QTKVSKTSSAVDTPSEALPIVPEAVADAASREAPAGSDATSDTASEAEEDKAVALAGVTVDEGANRASTNSSGVAGAAAPAVSKVGVDTEEVEEGAVSGGQEAADRGATPKGSPRSAADPPAAQDR-----RMTAVGEEQKGGEELPQQSKSTGTGSSDVPVAA--TAGIDDLLAGIEAELLLGGGDGEGKLD-GDKDEAKDSAVEENGDTRSTGEEQDFAPLREVAPGLDARAQKAHAELAALLAVAAEGKGEEAGSSVVQATDPSVRLGIELAAVLRARLSDWRQGKCMDRIGVGGLDGTFFVLKLEEMAAEARSALGPSSCPTAHRATGQSQS--QTRPELAASMDAITPGAMGAVSSAGSLPDVADPPPGDAAERDAT---------AVSDGKKSKGHSKKRPRVRGAATKAASADNG-----EAVSTRSVDDGVAEGVPAS-HATDDNASS--STASGXXXXXXAVRAARNAEKLKWADEVSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGTVEKE----------VTDSQGSNSDRRRK----HAASGDDATSDKRNHATSTDTLATARAIVE--GTIDLGGVGDXXXXXXXXXXXXXXXXXXXXXXXXXATAGAKDDAASVPAPDTRESGIVIAKDPTLPDV-----PSGWSAVFDTTHQAYYYHNLTTDETSWVLPATVAESHPADS 785          
BLAST of mRNA_A-nodosum_M_contig1006.5.4 vs. uniprot
Match: A0A7S3USF4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3USF4_HETAK)

HSP 1 Score: 80.5 bits (197), Expect = 3.420e-14
Identity = 42/99 (42.42%), Postives = 58/99 (58.59%), Query Frame = 0
Query: 1174 GDVWNGESLSGLLLGYGPRRYRNLGGGYYMITLGSGPEWAAAAVAALGQGVADPVAEARVDWICCTASAPGYGLFLRWAGDDDEQKLFDVPDELFDDPP 1272
            GD+W G  ++GL  G GPR +R LG GYY++T  + PE A AAV    +     + +AR DW  C        +F+RW G+ D  ++FD+P E FDDPP
Sbjct:    1 GDLWRGHQVAGLFPGCGPRAFRALGQGYYLVTFAA-PERAGAAVVLAAEEGPRALVQARSDWAKCKRD-----VFIRWVGEQDPDEVFDLPKEDFDDPP 93          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1006.5.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G8X5_ECTSI2.770e-8435.05Similar to Fe65 n=1 Tax=Ectocarpus siliculosus Tax... [more]
A0A6H5JJN1_9PHAE2.430e-4033.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3USF4_HETAK3.420e-1442.42Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1290..1321
NoneNo IPR availableGENE3D2.20.70.10coord: 1070..1116
e-value: 1.1E-7
score: 33.3
coord: 686..729
e-value: 1.5E-7
score: 32.8
NoneNo IPR availableGENE3D2.20.70.10coord: 69..113
e-value: 1.2E-9
score: 39.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 837..854
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1112..1157
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 721..854
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1387..1411
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1123..1157
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 417..669
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 269..289
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 922..948
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 474..494
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1351..1370
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 815..836
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..65
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 113..127
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1347..1428
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 209..229
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1298..1312
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 253..290
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 601..625
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1298..1318
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 98..237
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 735..749
NoneNo IPR availablePANTHERPTHR47852OS06G0298400 PROTEINcoord: 1066..1155
coord: 42..187
coord: 1284..1427
IPR001202WW domainSMARTSM00456ww_5coord: 1073..1106
e-value: 2.2E-4
score: 30.6
coord: 70..102
e-value: 1.9E-8
score: 44.0
coord: 691..724
e-value: 2.1E-6
score: 37.3
IPR001202WW domainPFAMPF00397WWcoord: 71..100
e-value: 7.5E-9
score: 35.5
coord: 692..722
e-value: 8.5E-9
score: 35.3
coord: 1076..1104
e-value: 1.3E-7
score: 31.6
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 75..100
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 696..722
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 1078..1104
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 69..102
score: 14.0676
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 690..724
score: 11.8809
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 1072..1106
score: 11.0929
IPR001202WW domainCDDcd00201WWcoord: 72..100
e-value: 1.40178E-8
score: 49.8338
IPR001202WW domainCDDcd00201WWcoord: 693..722
e-value: 5.65505E-5
score: 39.4334
IPR001202WW domainCDDcd00201WWcoord: 1076..1104
e-value: 5.91597E-6
score: 42.1298
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 1073..1105
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 66..100
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 690..724

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1006contigA-nodosum_M_contig1006:46421..51701 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1006.5.4mRNA_A-nodosum_M_contig1006.5.4Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1006 46416..52148 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1006.5.4 ID=prot_A-nodosum_M_contig1006.5.4|Name=mRNA_A-nodosum_M_contig1006.5.4|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1429bp
MGLVYYGSDSDEEGSSDRDGSSPTGSAAKTNEDRGVGLAFKTNEDRDAAE
AAGSPVSSAAADATEDAVLNLPSGWQQCMDSSGAIYFWNVDSGETTWEMP
AGAIYRRKESLAPDSSALSSSGDAAGTPKQVATGAAERDRVASDATSDTA
SEPDEGEDEDGGVKRSADIAPATLVSSATAENDKGDPDGGVSRSVENTPL
SSAAELDRTGGKSRSRKVGDGDQGANEERSVADDVAQAAAGLSCVDDLLA
GIEAEMLSGTGDGGGNRGAGDADKGDKDPTEEIDSAKEDFSPLRAISSGL
DVRAQQSYAELVASFAAAEGEGGDVGRQADGMDVKRRLALELGAVLRARL
SDWREGGLDGAFLVRKLEEMAVQARSSLLYDRATTESTQTDDVPPAVDVS
SDGACIAASTAVDSSKSFGGVAPPSEAGDNMPVDQERATLQKAAPKRNKS
KEKSKKGRRLGSGLIQSNSVINGKKKDNEGKAASENREGGSEGNEDSCHA
PVDAASKNGSTVAPGAKTTEALREAETIEKLRWADEVSAAAAAAVAAAAR
EKKEAEARERAVSAAAAAAVAAAAREKKEAEARERAAVDGQASSPPRQQG
DGDGHQDEMVPSVGDESREEGEIVVLPKAPDISEPVGRASEGEVSVSLSQ
NDAKEKNNDGDRTVGARPIGAPSAKHVVASEAGMAPVVNSLLPSGWAVVW
DDLHGANYYHNLATNETTWVLPSTRATEAPRASPAEEDPPAPSPPSPNGV
KIPTGSVSRETSPEGGKGERREEKKTSKSSKRRQKKSGGQTGDEQAGDSS
PTRGRGDMKKTTTLEQEISTEGNGSSAASTKASPTDKISIGEKEKAASAE
PGARRAAEELPRLVVWRSQPRTWARPGVRYAGGAIDLRKFLRKNRRRLPP
GTEGRRALLSISHFGWNSHGASMPSASLRDPRPRASRSLTASRPDGVPGS
GKLTVELEMFMHFSREGECHEERTRPLFRRSDRLRACQPEDAFVVRVEGK
VSEQTRRCATRLSRFRRQLVKMSLTLPAPSPSVPRPLSAFVRLPCPGTRA
FPLTWQCYLPPRVSSSKRLGRGGIRSPWAAVWDKIQNAYYYHNTETNETT
WVRPSASAVEEKRVVEDGVTPKISQEKNPTQDENIENVSHTALDSDPASQ
APSASASGAVDMRPSTLVWWSDAGDVWNGESLSGLLLGYGPRRYRNLGGG
YYMITLGSGPEWAAAAVAALGQGVADPVAEARVDWICCTASAPGYGLFLR
WAGDDDEQKLFDVPDELFDDPPPDPAVAVAVAVDGDTASHTIASAEAEAA
REEAEAAREEEEANAAAAAAVAATEAAEAAGSEAAAKAVAKVPASASLPK
KRKTNKGSGTGTSSVGSISKKRKGAASLIDKWKAVASTAGEEAEREAERQ
EKMERWKARAAALDPDNPNFMPLGRKRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR036020WW_dom_sf