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Homology
BLAST of mRNA_A-nodosum_M_contig10054.2.1 vs. uniprot
Match: A0A6H5KKF7_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKF7_9PHAE) HSP 1 Score: 102 bits (254), Expect = 1.500e-20 Identity = 51/92 (55.43%), Postives = 69/92 (75.00%), Query Frame = 0 Query: 1 MFSSDPKHLIKTSSAKGKLPKTEIRRRTLDPRWSSKTCQLTVSDPVALRHSHVCLIVMNREQG--VKDEILGVANFSLAEATWVNSQRPAPA 90
+FSSDPKHL+K S A GK PKT ++++TL +W+ + QL +SDPV LRHSHV L+VM++E+G K E++GVAN SLAE W+N+ PA A
Sbjct: 384 VFSSDPKHLVKASPA-GKPPKTTVKKKTLRAKWNKYSFQLAISDPVLLRHSHVSLVVMDKERGRNSKGEVIGVANLSLAEVLWINNSPPASA 474
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10054.2.1 vs. uniprot
Analysis Date: 2022-09-16 ( Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
| Match Name | E-value | Identity | Description | |
|---|
| A0A6H5KKF7_9PHAE | 1.500e-20 | 55.43 | C2 domain-containing protein n=1 Tax=Ectocarpus sp... | [more] |
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR000008 | C2 domain | PFAM | PF00168 | C2 | coord: 10..82
e-value: 3.2E-5
score: 24.2 |
| IPR035892 | C2 domain superfamily | GENE3D | 2.60.40.150 | C2 domain | coord: 1..88
e-value: 6.4E-6
score: 27.9 |
| IPR035892 | C2 domain superfamily | SUPERFAMILY | 49562 | C2 domain (Calcium/lipid-binding domain, CaLB) | coord: 5..79 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 249..268 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 87..125 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 245..268 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 99..114 |
| None | No IPR available | CDD | cd00030 | C2 | coord: 3..78
e-value: 1.05066E-4
score: 38.9723 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_A-nodosum_M_contig10054.2.1 ID=prot_A-nodosum_M_contig10054.2.1|Name=mRNA_A-nodosum_M_contig10054.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=301bp
MFSSDPKHLIKTSSAKGKLPKTEIRRRTLDPRWSSKTCQLTVSDPVALRH
SHVCLIVMNREQGVKDEILGVANFSLAEATWVNSQRPAPAPAATGRPAAR
QSSIASSRSGLQSSPALARGPGPVAPENRTLFATVGDIYCDAEGDADDFD
DTGIDFDGVDLEEEDADVGAARGSVEEIPAFDLLLVRNGLPRGRIRGRCS
LLLGPEKDGGGGEFLGGERGFRRRGHRDDIGCWWAGRRVWRGGRRRTESQ
TGAVRSQQGRSETPLSRAPASSPIPRLAWLLCKRGGGVNFRHKAGVQCTY
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Annotated Terms
The following terms have been associated with this polypeptide:
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