prot_A-nodosum_M_contig1005.11.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1005.11.1
Unique Nameprot_A-nodosum_M_contig1005.11.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length98
Homology
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BLAST of mRNA_A-nodosum_M_contig1005.11.1 vs. uniprot
Match: D8LMY3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMY3_ECTSI)

HSP 1 Score: 102 bits (255), Expect = 1.470e-26
Identity = 55/85 (64.71%), Postives = 75/85 (88.24%), Query Frame = 0 
Query:   13 QEMADRLSELEGLAGARSDSGTLLREHQEEMLVKMREIRQALASESGELESVKAANEEMAKLRELIKRKDYRILHLTRALDAAST 97
            +EM ++LS+LEGLAG  +D  TLL++HQ+EML K+REIR A+A+E+GEL+SVK AN E+AKLRE+IKR+DYRILHL+RAL+A ++
Sbjct:    6 KEMTEQLSKLEGLAGG-NDGHTLLQQHQKEMLAKLREIRAAMATETGELDSVKEANAEVAKLREVIKRRDYRILHLSRALEAGAS 89
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1005.11.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LMY3_ECTSI1.470e-2664.71Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 64..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1005contigA-nodosum_M_contig1005:94588..97740 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1005.11.1mRNA_A-nodosum_M_contig1005.11.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1005 90771..98594 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1005.11.1 ID=prot_A-nodosum_M_contig1005.11.1|Name=mRNA_A-nodosum_M_contig1005.11.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=98bp
MARNSTEGGAWWQEMADRLSELEGLAGARSDSGTLLREHQEEMLVKMREI
RQALASESGELESVKAANEEMAKLRELIKRKDYRILHLTRALDAAST*
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