prot_A-nodosum_M_contig10.65.1 (polypeptide) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig10.65.1 vs. uniprot
Match: A0A6H5JCH7_9PHAE (RRM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCH7_9PHAE) HSP 1 Score: 335 bits (858), Expect = 5.240e-100 Identity = 324/744 (43.55%), Postives = 371/744 (49.87%), Query Frame = 0
Query: 13 SAFHGAGPYDDALNFRSFELALNDVPDITASCEELVSAEERVPEHSKPT-YSSPMAPLVPSGRSGITDETAAXXXXXXAARLE---------------------------RRLTPPQNSSSSDRLLRPSKPEP--QSW---HPLPPARDDASSLLSCSLSRADRGLDSRLRASSWHAADMRSRKSPSLSNGSSYHQQGTCFSLRSPKREAEPSKEEDKPSNEILDGSDVLQQISNVTSTEPSNEREVFVGGLRESEDSVHITEEELATYFSKFGIIESVSINRDDRTHRGRGFAFVKFFQESAALNAVVADASTHVIRGTTVSVQWSRGAKD---GGDRPRRXXXXXXXXXXXXXXSPPRNXXXXXXXXXXXXXXXXXXXXXXXXX-------CGGGCSRGFSPLRNRSQSH-VHPAGSGAGGMPFAYCGGGHGGDHLNQAMVCVVVPAQRAAALGLSHLPQHAM---GSCASRGTPPRDIHFPTLTQSTSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYLHHAPQGADQHEHHAIGSIGSHHHVGAKTS--------------------------------HSYGVPAPMHMPPLYHERRELSEPRGYQMPLNSGNGGTAGTGAAGIGVGSGGGRSMVDYKRSK-----FDLPP--PSTSYPPPGWSGDGTGMRGMSHDTI---RSQSPPIGMRTAHGTRNGGGAPRPTPPQPRGYDKQSQNYQSSRYGAVSG 667
SAFH D+LNF +FE AL D+ T+ + + E SKP + S A P T E AA + S+ RL R + PEP Q W P A DD + + + G DSRLR+ SWHA+D SR+SP G Y PKR + E+LDGSDVLQQISNVTSTEPSNEREVFVGGLRESED+VHITEEELATYF+KFG+IESVSINRDDRT RGRGFAFVKFFQE+AALNAVVADASTHVIRGTTVSVQWSRGAKD GGDRPRRXXXXXXXXXXXXXX P XXXXXXXX CG GCS GFSP+R+R H +H +G GG+P+ + GG HG +H NQ MVCVVVPAQRAAALG + P H G C SRGT P D HF +L QS +A XXXXXX XXXXXXXXXXX + G+ HH+ S SYG P MHMPP+ ER+ +EPR Y AG SG S +Y+RS P P Y G SG G + G + RSQSPP +R+ R GGGAPRP PR YD +Y S+RY G
Sbjct: 8 SAFHDVSVGRDSLNFHTFERALKDMDGDTSDAADPAEERAGLAEPSKPARHGSVFAVATPPA----TPEAAADRLEGEQHNXXXXXXXXXXXXXXXXXXXXXXXXXXXAGKPAVAMYRQMSAHRLFRAAPPEPKRQQWKVCEETPLAGDDTVAASAAASPMC--GEDSRLRSLSWHASDC-SRRSPPPPPGLEYSHSNRKNDRFFPKRIV------GRDDREVLDGSDVLQQISNVTSTEPSNEREVFVGGLRESEDAVHITEEELATYFAKFGVIESVSINRDDRTQRGRGFAFVKFFQEAAALNAVVADASTHVIRGTTVSVQWSRGAKDAGSGGDRPRRXXXXXXXXXXXXXXXPSNGSGRSCARPGMFPHKGGGXXXXXXXXXXXXAGACGVGCSHGFSPMRSRGAGHSMHGPSAGGGGVPYGFGGGRHG-EHHNQPMVCVVVPAQRAAALGFAPHPPHGFHSTGKCTSRGTAPCDGHFSSLAQSNAASXXXXXXHPGYASHTRSNSQPMSHGXXXXXXXXXXXXXXXXXXXHXXFXXXXXGAASGTPHHLLVNPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSYGAPPAMHMPPMPRERQGRAEPRDYP---------------AGASGSSGSSPSFGEYERSSQSESHLHSPHALPEWGYDDAGGSGAGRAVGGSMATALGVTRSQSPPPMVRS----RIGGGAPRPPSASPRAYDG---HYSSTRYNGRGG 715
BLAST of mRNA_A-nodosum_M_contig10.65.1 vs. uniprot
Match: D7FM19_ECTSI (RNA recognition motif. (A.k.a. RRM, RBD, or RNP domain) containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM19_ECTSI) HSP 1 Score: 169 bits (427), Expect = 2.920e-43 Identity = 128/300 (42.67%), Postives = 152/300 (50.67%), Query Frame = 0
Query: 13 SAFHGAGPYDDALNFRSFELALNDVPDITASCEELVSAEERVPEHSKPTYSSP--MAPLVPSGRSGITDETAAXXXXXXAARLERRLTPPQ----------------------NSSSSDRLLRPSKPEP--QSW---HPLPPARDDASSLLSCSLSRADRGLDSRLRASSWHAADMRSRKSP---SLSNGSSYHQQGTCFSLRSPKREAEPSKEEDKPSNEILDGSDVLQQISNVTSTEPSNEREVFVGGLRESEDSVHITEEELATYFSKFGIIESVSINRDDRTHRGRGFAFVKFFQE 280
SAFH A D+LNF +FELAL DV T+ + + E SKP M P+ D X +S+ RL R + PEP Q W P A D+ +S + + + G DSRLR+SSWHA L G + ++ F R R+ E+LDGSDVLQQISN+TSTEPSNEREVFVGGLRESED+VHITEEELATYF+KFG+IESVSINRDDRT RGRGFAFVKFFQE
Sbjct: 8 SAFHDASAGRDSLNFHTFELALKDVDGDTSDAADPAEQRAGLAEPSKPARRGSVFMVATPPATPEAAADSLEGEQRIHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMYRQTSAHRLFRAAPPEPKRQQWKVCEKTPLAGDETASTSAAAAPMS--GEDSRLRSSSWHAXXXXXXXXXXXXGLEYGHNNNKNDRFFPKRIVCRD----------DREVLDGSDVLQQISNLTSTEPSNEREVFVGGLRESEDAVHITEEELATYFAKFGVIESVSINRDDRTQRGRGFAFVKFFQE 295
BLAST of mRNA_A-nodosum_M_contig10.65.1 vs. uniprot
Match: D7FM18_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM18_ECTSI) HSP 1 Score: 135 bits (340), Expect = 1.950e-30 Identity = 137/355 (38.59%), Postives = 167/355 (47.04%), Query Frame = 0
Query: 363 CGGGCSRGFSPLRNRSQSH-VHPAGSGAGGMPFAYCGGGHGGDHLNQAMVCVVVPAQRAAALGLSHLPQHAM---GSCASRGTPPRDIHFPTLTQSTSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG--YLHH--APQGADQHEHHAIGSIGSHHHVGAKTS--------------------------------HSYGVPAPMHMPPLYHERRELSEPRGYQMPLNSGNGGTAGTGAAGIGVGSGGGRSMVDYKRSKFDLPPPSTSYPPPGWS-----GDGTGMRG-----MSHDTIRSQSPPIGMRTAHGTRNGGGAPRPTPPQPRGYDKQSQNYQSSRYGAVSG 667
CG GCS GFSP+R+R H +H +G GG+P+ Y GG HG +H NQ MVCVVVPAQRAAALGL+ P H + G C SRGT P D HF +L QS+ XXXXXXXXXXX XXXXXXX Y HH +P G H + G+ HH+ S SYG P MHMPP+ ER+ +EPR Y + +G S +Y+RS ++Y P W G G G G +H +RSQSPP +R+ RNGGGAPRP PR YD +Y S+RY G
Sbjct: 25 CGVGCSNGFSPMRSRGAGHSIHGPSAGGGGVPYGYGGGRHG-EHHNQPMVCVVVPAQRAAALGLAPHPPHGLHSTGKCTSRGTAPCDGHFSSLAQSSXXXXXXXXXXXXXHPGYASHTRSHSQPISHGXXXXXXXXXXYGHHGGSPHGNFDHXX-XXXAAGTPHHLSVSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRSYGGPPAMHMPPMPRERQGRAEPRDYP---------SGASGXXXXXXXXXXSPSFGEYERSSQSESHLHSAYALPEWGYDDAGGSGAGRAGGGAMATAHGVVRSQSPPPMVRS----RNGGGAPRPPSASPRAYDG---HYSSTRYNGRGG 361
BLAST of mRNA_A-nodosum_M_contig10.65.1 vs. uniprot
Match: A0A7J7L5F8_9MAGN (RRM domain-containing protein n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7L5F8_9MAGN) HSP 1 Score: 53.9 bits (128), Expect = 3.060e-5 Identity = 36/90 (40.00%), Postives = 50/90 (55.56%), Query Frame = 0
Query: 215 VTSTEPSNEREVFVGGLRESEDSVHITEEELATYFSKFGIIESVSINRDDRTHRGRGFAFVKFFQESAALNAVVADASTHVIRGTTVSVQ 304
+T T S ++F+ L S + T+EEL FS FG I+ VS+ RD RT R +GFAFV F ES A A+ A + +I G + V+
Sbjct: 13 ITQTHRSFSSQIFISRL-----SFYTTDEELNRLFSPFGQIKQVSLVRDPRTQRPKGFAFVTFAMESEAQKALEA-MNGRIIGGRLIFVE 96
BLAST of mRNA_A-nodosum_M_contig10.65.1 vs. uniprot
Match: A0A2R6PA78_ACTCC (Heterogeneous nuclear ribonucleoprotein like n=2 Tax=Actinidia TaxID=3624 RepID=A0A2R6PA78_ACTCC) HSP 1 Score: 57.8 bits (138), Expect = 4.270e-5 Identity = 46/129 (35.66%), Postives = 66/129 (51.16%), Query Frame = 0
Query: 187 REAEPSKEEDKPSNEILDGSDVLQQISNVTSTEPSNEREVFVGGLRESEDSVHITEEELATYFSKFGIIESVSINRDDRTHRGRGFAFVKFFQESAALNAVVADASTHVIRGTTVSVQWSRGAKDGGDR 315
+EA P EE+ N+ G QQ S S+ P + +++FVGGL + +T E L YF +FG I V I D +R RGF F+ F E AAL+ V + + + +V V+W+ KDG R
Sbjct: 78 KEATPKAEEN--GNQHCQGCLCYQQKS---SSSPLSNKKIFVGGLPPT-----LTAEALKQYFERFGAITDVVIIHDMENNRSRGFGFITFDSEEAALS--VLQSRYYELNKKSVEVKWAE-PKDGNKR 193 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10.65.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 5
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_A-nodosum_M_contig10.65.1 ID=prot_A-nodosum_M_contig10.65.1|Name=mRNA_A-nodosum_M_contig10.65.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=732bpback to top |