prot_A-nodosum_M_contig10.173.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig10.173.1
Unique Nameprot_A-nodosum_M_contig10.173.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length190
Homology
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BLAST of mRNA_A-nodosum_M_contig10.173.1 vs. uniprot
Match: A0A6H5JGY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGY4_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 4.670e-13
Identity = 34/50 (68.00%), Postives = 42/50 (84.00%), Query Frame = 0 
Query:    1 DALGDLQTKLAHIQWRKYMNDNDIRKALDLTKRMHDRDLVLQLAVDREWE 50
            DAL DL TKLAHIQWR++ ND  IRKAL+ TKR+ +RD++LQL+VDRE E
Sbjct:   42 DALSDLHTKLAHIQWRRHANDKSIRKALETTKRLQERDMMLQLSVDREGE 91
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10.173.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JGY4_9PHAE4.670e-1368.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 79..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig10contigA-nodosum_M_contig10:1713784..1715685 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig10.173.1mRNA_A-nodosum_M_contig10.173.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig10 1713784..1715685 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig10.173.1 ID=prot_A-nodosum_M_contig10.173.1|Name=mRNA_A-nodosum_M_contig10.173.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=190bp
DALGDLQTKLAHIQWRKYMNDNDIRKALDLTKRMHDRDLVLQLAVDREWE
RERRAEAIIRDELSRKAVLSETFLKDWEKQEEKNRKQQLKETKLRLKTIR
RAERVLRPKKESGSKLAFLDKESIPLEDGHHRVLSGKGEKDSRMDLKDKL
GTLKRGVKEKRRELIRAGKEGRKYGSYAASFKTGRGSIL*
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