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Homology
BLAST of mRNA_A-nodosum_M_contig10.137.1 vs. uniprot
Match: D8LJW3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJW3_ECTSI) HSP 1 Score: 90.5 bits (223), Expect = 4.170e-21 Identity = 39/51 (76.47%), Postives = 47/51 (92.16%), Query Frame = 0 Query: 57 IGYQLDLDRSCMITSSEIDVPIDPATALPLVCQWFCDSCASTETGVVAATA 107
+GYQLDLDRSC+IT+S++D+PID T LP+VCQWFCDSC+ST TGVVAATA
Sbjct: 1 MGYQLDLDRSCLITASDVDIPIDSVTGLPVVCQWFCDSCSSTVTGVVAATA 51
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10.137.1 vs. uniprot
Analysis Date: 2022-09-16 ( Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match Name | E-value | Identity | Description | |
D8LJW3_ECTSI | 4.170e-21 | 76.47 | Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... | [more] |
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR001965 | Zinc finger, PHD-type | SMART | SM00249 | PHD_3 | coord: 17..96 e-value: 1.7E-4 score: 30.9 |
IPR013083 | Zinc finger, RING/FYVE/PHD-type | GENE3D | 3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | coord: 4..119 e-value: 9.1E-8 score: 33.6 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 114..144 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 120..144 |
IPR019786 | Zinc finger, PHD-type, conserved site | PROSITE | PS01359 | ZF_PHD_1 | coord: 18..95 |
IPR019787 | Zinc finger, PHD-finger | PROSITE | PS50016 | ZF_PHD_2 | coord: 15..98 score: 8.9738 |
IPR011011 | Zinc finger, FYVE/PHD-type | SUPERFAMILY | 57903 | FYVE/PHD zinc finger | coord: 14..98 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_A-nodosum_M_contig10.137.1 ID=prot_A-nodosum_M_contig10.137.1|Name=mRNA_A-nodosum_M_contig10.137.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=145bp MQQLEPQRNEPVEISSACIICGERDAVDDTEGVVSLSEESFTLRCNSCRR WYHPWCIGYQLDLDRSCMITSSEIDVPIDPATALPLVCQWFCDSCASTET GVVAATAKKSVGVRVKSTGRNSKHGAKKARKKSKDKQPRHQQHH* back to top
Annotated Terms
The following terms have been associated with this polypeptide:
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