prot_A-nodosum_M_contig10.116.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig10.116.1
Unique Nameprot_A-nodosum_M_contig10.116.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length446
Homology
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BLAST of mRNA_A-nodosum_M_contig10.116.1 vs. uniprot
Match: D7FM50_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM50_ECTSI)

HSP 1 Score: 160 bits (404), Expect = 1.040e-40
Identity = 184/429 (42.89%), Postives = 238/429 (55.48%), Query Frame = 0 
Query:    1 MAAPQFSVGVNADPILVEQTIDKTLDQIIKERRDKQGAGAGRGSKTAAGGGKKDAAKRKAGQVAKSVGTGKAKREAALAKKRGISKTSKPESLQIDAQVQRNKGKQAKKKVVKDAEALVASTKGASKAKARKKRSKAVAGGGVTNKAMTA--AQEKRGGPRPGGKKQGAGPGGPTQAPPDLSGKGFNMGVRGGKRQXXXXXXXXXXXXXXXXXXXXXXXXVGXAGGSVGVGDVRAMAAAQPITAKGTRKPRRKKQAGDTGDASSTTFTFTPDRNLQISFLSGSGGGSGRXGGKYPGGSYVHGSPDGVGRHSTDASKSFRFQPRSAVGAISS------ASAFSPSSPPFDNDFRNGGGGRVGGGAGRYTPPART-----GSGNGSRRVGPKDAVRAKTHAMDRMMTSTKNSRALTMAARRNRQGESYKGG 416
            M+AP+FSVGV+ADP++VEQTIDKTL++II ERR +  A     SK AA      AAK+K   VAKSVGT KAKR+AAL+KKRGIS ++KP   +I+A+VQR K +Q+KKK  ++A+ LVAST+G SKAKA+K           + K+  A  A+ KRGG RPGGKKQ        QA  ++  KGFN+GV+G  ++XXXXXXXXXXXXXXXXXXXXXXXX  X        D +A+ A         +   R                F PD N+QISF S   GGS  X      G++V GSP+G                               +  F+P+  P +N  R  GG +       YTPPA T     G     RR GPKD  R++ + +DR++ +T+ +RA T+ ARRN  G    GG
Sbjct:    1 MSAPKFSVGVDADPMMVEQTIDKTLEEIINERRKEVKATPTTKSKKAA------AAKQK---VAKSVGTSKAKRDAALSKKRGISASAKPSPAKIEAEVQRTKTQQSKKKARQNADVLVASTRGVSKAKAKKAXXXXXXXXXASKKSTAAGSARSKRGGARPGGKKQXXXXXXXXQAAQNIKSKGFNIGVKGTSKKXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXDAQAVVA--------PKANMRXXXXXXXXXXXXANAPFKPDHNMQISFHS---GGSXXXXXXVTQGAFVFGSPNGXXXXXXXXXXXXXXXXXXXXXXXXXXPTSFLSPTFNPAPQPINNGLRGSGGVKKA----TYTPPAPTRRIFSGGVGDVRRAGPKDVRRSQGNPVDRVVRATRKARAGTLDARRN--GRQANGG 401
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10.116.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FM50_ECTSI1.040e-4042.89Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 334..445
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 257..281
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..315
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 389..403
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 190..206

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig10contigA-nodosum_M_contig10:1084610..1097505 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig10.116.1mRNA_A-nodosum_M_contig10.116.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig10 1084402..1099871 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig10.116.1 ID=prot_A-nodosum_M_contig10.116.1|Name=mRNA_A-nodosum_M_contig10.116.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=446bp
MAAPQFSVGVNADPILVEQTIDKTLDQIIKERRDKQGAGAGRGSKTAAGG
GKKDAAKRKAGQVAKSVGTGKAKREAALAKKRGISKTSKPESLQIDAQVQ
RNKGKQAKKKVVKDAEALVASTKGASKAKARKKRSKAVAGGGVTNKAMTA
AQEKRGGPRPGGKKQGAGPGGPTQAPPDLSGKGFNMGVRGGKRQQQQQQQ
QLQAPAGRRTRRRRGGGGVGGAGGSVGVGDVRAMAAAQPITAKGTRKPRR
KKQAGDTGDASSTTFTFTPDRNLQISFLSGSGGGSGRGGGKYPGGSYVHG
SPDGVGRHSTDASKSFRFQPRSAVGAISSASAFSPSSPPFDNDFRNGGGG
RVGGGAGRYTPPARTGSGNGSRRVGPKDAVRAKTHAMDRMMTSTKNSRAL
TMAARRNRQGESYKGGAGSGGRGARGARGGNEEAPRRVIILGNRH*
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