prot_A-nodosum_M_contig1.164.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1.164.1
Unique Nameprot_A-nodosum_M_contig1.164.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length204
Homology
BLAST of mRNA_A-nodosum_M_contig1.164.1 vs. uniprot
Match: A0A6H5KLE3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLE3_9PHAE)

HSP 1 Score: 220 bits (561), Expect = 1.520e-64
Identity = 102/192 (53.12%), Postives = 141/192 (73.44%), Query Frame = 0
Query:   14 PHLPTT-GRRTQEAKTVWNGRWLNLMCKHSPFQMDGVGEVAQCSWEGAYQVTLDHKSGIHTSNIPLDPSSWTYFGLCWKGVYYVWTVLCFGWCSSPYIYHTLSEAVTQYLRGKGISALAWLDGSWLTNEKATQHGSLQDQARAAHSATCLALTVFYKCGYFISFSECSLALSTRRVYLGVICDSQTRRFEVP 204
            PHL    G   ++ + +W+ RWLNLMC HSPF MDGVG+VAQC+W+GA+QVT+DHK+G H  ++ LDP SW YFG  W+G  YV+TVL FGWCS+P+IY +LSEAV +YLR + I  L W+D  +LTN ++T+  S ++Q +AA +A  +AL VFY+ GYF+S  +  L+ +T  V+LG+ICD++  RFEVP
Sbjct:  111 PHLVLPLGVEPKKPRLIWDARWLNLMCLHSPFSMDGVGKVAQCAWQGAHQVTIDHKAGYH--HVALDPDSWQYFGFEWEGEMYVFTVLAFGWCSAPFIYSSLSEAVARYLRARDIPVLTWIDDFYLTNFRSTRMLSSKEQFQAALTAAYVALEVFYRAGYFLSIKKSELSPTTCLVFLGIICDAERGRFEVP 300          
BLAST of mRNA_A-nodosum_M_contig1.164.1 vs. uniprot
Match: UPI001CF174B4 (uncharacterized protein LOC114948837 n=4 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF174B4)

HSP 1 Score: 95.9 bits (237), Expect = 2.000e-19
Identity = 62/196 (31.63%), Postives = 102/196 (52.04%), Query Frame = 0
Query:   12 STPHL--PTTGRRTQEAKTVWNGRWLNLMCKHSPFQMDGVGEVAQCSWEGAYQVTLDHKSGIHTSNIPLDPSSWTYFGLCWKGVYYVWTVLCFGWCSSPYIYHTLSEAVTQYLRGKGISALAWLDGSWLTNE-KATQHGSLQDQARAAHSATCLALTVFYKCGYFISFSECSLALSTRRVYLGVICDSQTRRFEVP 204
            ++PHL  P T   ++  +   + R+LNL  K  PF++D + ++ +    G +Q + D K+G    ++ L PSS T+FGL W GVY+V+  L FGW +S YIYH L  AVT   R  G+    ++D   +    +A    +L      A +A  +   +  + GYF++ ++     S    +LG +CDS  + F +P
Sbjct:  120 TSPHLVLPLTVEPSKP-RLCHDERFLNLWIKDLPFKLDHLTDLPRYVLPGHFQTSFDDKNGYQ--HVLLHPSSRTFFGLQWNGVYFVFCTLPFGWKASAYIYHNLGLAVTSAARSFGVPVSQYIDDRHVGQLCRAPASSTLSPNRVLAVAAAYILCYLLAEAGYFVAIAKSQCVPSIVIRFLGFLCDSGRQAFLLP 312          
BLAST of mRNA_A-nodosum_M_contig1.164.1 vs. uniprot
Match: UPI000A2A732A (uncharacterized protein LOC110252942 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A732A)

HSP 1 Score: 91.7 bits (226), Expect = 5.010e-18
Identity = 53/176 (30.11%), Postives = 92/176 (52.27%), Query Frame = 0
Query:   40 KHSPFQMDGVGEVAQCSWEGAYQVTLDHKSGIHTSNIPLDPSSWTYFGLCWKGVYYVWTVLCFGWCSSPYIYHTLSEAVTQYLRGKGISALAWLD-----------GSWLTNEKATQHGSLQDQARAAHSATCLALTVFYKCGYFISFSECSLALSTRRVYLGVICDSQTRRFEVP 204
            + +PF++D +  V Q  + G++   +D KSG    +I L   S  YFG+ WKG ++V T L FGW +SP++Y ++  +VT +LR +GI+   ++D           G W  + +       ++ A AA   TC   ++    GYF    +C+L  +    +LG+I D++ + F +P
Sbjct:    2 RETPFKLDTLVSVPQLVYRGSHLSKIDDKSGY--DHIFLSEDSQQYFGIEWKGWWFVCTTLPFGWKNSPFVYQSIGRSVTTFLRERGITCSLYIDDRLVGEIFSGEGHWSRSIELRDKKFSREAAGAALYVTC---SLLXSLGYFXGLKKCTLRPTVNIRFLGMIXDTEAQAFLIP 172          
BLAST of mRNA_A-nodosum_M_contig1.164.1 vs. uniprot
Match: UPI001CF3ACA9 (uncharacterized protein LOC122957467 n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF3ACA9)

HSP 1 Score: 91.3 bits (225), Expect = 7.330e-18
Identity = 57/175 (32.57%), Postives = 89/175 (50.86%), Query Frame = 0
Query:   33 RWLNLMCKHSPFQMDGVGEVAQCSWEGAYQVTLDHKSGIHTSNIPLDPSSWTYFGLCWKGVYYVWTVLCFGWCSSPYIYHTLSEAVTQYLRGKGISALAWLDG---SWLTNEKATQHGSLQDQARAAHSATCLALTVFYKCGYFISFSECSLALSTRRVYLGVICDSQTRRFEVP 204
            R+LNL  +  PF +D + ++ +   +G +Q T D KSG    ++ L   S TYFGL W+G Y+V+  L FGW +S Y+YH++    T ++R  G+    ++D      L   +     S  D  RA  +A  +A  V    GYFI   + +L  +   ++LG I DS    F +P
Sbjct:   17 RFLNLWIRGLPFSLDLITDLPRYVRKGNFQTTCDDKSGY--DHVLLSTESRTYFGLEWRGWYFVFNTLPFGWKASAYLYHSIGLVATSHIRSHGVPCSQYIDDRHFGQLQIRRDAPPCSWSDFQRA-QAALYIACYVLIDLGYFIGLQKSTLVPTQAPIFLGYIIDSVKSAFLMP 188          
BLAST of mRNA_A-nodosum_M_contig1.164.1 vs. uniprot
Match: UPI00077AD091 (uncharacterized protein LOC107355532 n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077AD091)

HSP 1 Score: 84.7 bits (208), Expect = 1.290e-15
Identity = 57/195 (29.23%), Postives = 93/195 (47.69%), Query Frame = 0
Query:   12 STPHL--PTTGRRTQEAKTVWNGRWLNLMCKHSPFQMDGVGEVAQCSWEGAYQVTLDHKSGIHTSNIPLDPSSWTYFGLCWKGVYYVWTVLCFGWCSSPYIYHTLSEAVTQYLRGKGISALAWLDGSWLTNEKATQHGSLQDQARAAHSATCLALTVFYKCGYFISFSECSLALSTRRVYLGVICDSQTRRFEVP 204
            S PHL  P T   T+  +   + R+LNL  +  PF++D + ++      G +Q T D K+G    ++ + P S  +F   W+G Y+ +  L FGW  S ++YH     VT   R  G+    ++D   +    ++     Q   + A +A  + L++    GYFI+  + S   ST   +LG I DS  + F VP
Sbjct:  154 SPPHLVLPLTVEPTKP-RLCHDERFLNLWTRDLPFKLDNLPDLPLHVLPGHFQTTFDDKNGYQ--HLKIHPDSQEFFSFSWRGYYFPFCTLPFGWKVSAFLYHNFGLVVTSAARSLGVPVSQYIDDRHVGQLFSSGLTVYQPCRKLALAAAFILLSLLVSAGYFINLVKSSPVPSTSVRFLGFISDSILQAFLVP 345          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1.164.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KLE3_9PHAE1.520e-6453.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI001CF174B42.000e-1931.63uncharacterized protein LOC114948837 n=4 Tax=Acrop... [more]
UPI000A2A732A5.010e-1830.11uncharacterized protein LOC110252942 n=1 Tax=Exaip... [more]
UPI001CF3ACA97.330e-1832.57uncharacterized protein LOC122957467 n=1 Tax=Acrop... [more]
UPI00077AD0911.290e-1529.23uncharacterized protein LOC107355532 n=1 Tax=Acrop... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 55..147
e-value: 5.3E-8
score: 34.2
NoneNo IPR availableGENE3D3.10.10.10HIV Type 1 Reverse Transcriptase, subunit A, domain 1coord: 77..99
e-value: 5.3E-8
score: 34.2
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 12..199

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1contigA-nodosum_M_contig1:2086752..2087363 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1.164.1mRNA_A-nodosum_M_contig1.164.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1 2086548..2087363 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1.164.1 ID=prot_A-nodosum_M_contig1.164.1|Name=mRNA_A-nodosum_M_contig1.164.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=204bp
MVYIGRSHLFPSTPHLPTTGRRTQEAKTVWNGRWLNLMCKHSPFQMDGVG
EVAQCSWEGAYQVTLDHKSGIHTSNIPLDPSSWTYFGLCWKGVYYVWTVL
CFGWCSSPYIYHTLSEAVTQYLRGKGISALAWLDGSWLTNEKATQHGSLQ
DQARAAHSATCLALTVFYKCGYFISFSECSLALSTRRVYLGVICDSQTRR
FEVP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043128Rev_trsase/Diguanyl_cyclase
IPR043502DNA/RNA_pol_sf