prot_A-nodosum_M_contig1.138.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1.138.1
Unique Nameprot_A-nodosum_M_contig1.138.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length188
Homology
BLAST of mRNA_A-nodosum_M_contig1.138.1 vs. uniprot
Match: A0A6H5KWV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWV2_9PHAE)

HSP 1 Score: 216 bits (550), Expect = 4.920e-64
Identity = 110/182 (60.44%), Postives = 133/182 (73.08%), Query Frame = 0
Query:    7 VDEKWFYMFKQGQRYYLGAGEELPVHKVKHKSHIQKVMFLAVVGRPRWDTVANRSFDGKIGIFPFTRRVPAQRSSRNRAAGTMETKMVEVTKAVYKQKMLDEVFPAIKRTWPGGPSPVSVQQDNAPAHKINDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLFFFNSIQSLQDRTTLRTV 188
            +DEKWFY+ KQGQRYY   GE LP+ KV+HKSH+ KVMFLA V RPR+D+  +R FDGKIGI+PFT +  AQR+ RN AAGTM T  VEV + +YK K+ + VFP I+  +P  P  +  QQ+NAP H+  +DPD+VAA       I L+NQPPNSPD NILDL FFNSIQSLQDRTT  TV
Sbjct:   60 LDEKWFYICKQGQRYYFYEGEHLPIRKVQHKSHVIKVMFLAAVARPRYDSSRSRQFDGKIGIYPFTVQRAAQRNGRNMAAGTMVTHSVEVNRTLYK-KLNNNVFPDIRAKFPSSPI-IFAQQENAPGHRAMEDPDVVAAAGQGAGRIELVNQPPNSPDCNILDLGFFNSIQSLQDRTTPTTV 239          
BLAST of mRNA_A-nodosum_M_contig1.138.1 vs. uniprot
Match: UPI000B906F28 (uncharacterized protein LOC110892967 n=1 Tax=Helianthus annuus TaxID=4232 RepID=UPI000B906F28)

HSP 1 Score: 196 bits (499), Expect = 1.080e-59
Identity = 101/190 (53.16%), Postives = 132/190 (69.47%), Query Frame = 0
Query:    1 MRNVVMVDEKWFYMFKQGQRYYLGAGEELPVHKVKHKSHIQKVMFLAVVGRPRWDTVANRSFDGKIGIFPFTRRVPAQRSSRNRAAGTMETK-MVEVTKAVYKQKMLDEVFPAIKRTWPGGPS-PVSVQQDNAPAHKINDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLFFFNSIQSLQDRTTLRTV 188
            M NVV +DEKWFY+ K  +RYYL  GE+ P+   K K  I KVMFLA V RPR+DT  N  F GKIGIFPFT+  PA+RSS+NR AGT+ETK ++ V K V +  ++D+V PAI+  WP G + P+ +QQDNA  H   DD   +   + DG++IRL  QPPNSPD N+LDL FF++IQSLQ++  L ++
Sbjct:   14 MFNVVHIDEKWFYLSKPSKRYYLLPGEDEPLRTCKSKKFITKVMFLAAVARPRFDTSGNERFSGKIGIFPFTKLEPAKRSSKNRVAGTLETKPILSVIKEVTRSWLIDKVLPAIRDKWPQGHTGPIFIQQDNAKPHNNIDDEQFIQEASRDGFDIRLRFQPPNSPDLNVLDLGFFHAIQSLQEQEVLGSI 203          
BLAST of mRNA_A-nodosum_M_contig1.138.1 vs. uniprot
Match: UPI000B8F2756 (uncharacterized protein LOC110913170 n=1 Tax=Helianthus annuus TaxID=4232 RepID=UPI000B8F2756)

HSP 1 Score: 199 bits (505), Expect = 7.450e-59
Identity = 104/190 (54.74%), Postives = 132/190 (69.47%), Query Frame = 0
Query:    1 MRNVVMVDEKWFYMFKQGQRYYLGAGEELPVHKVKHKSHIQKVMFLAVVGRPRWDTVANRSFDGKIGIFPFTRRVPAQRSSRNRAAGTMETK-MVEVTKAVYKQKMLDEVFPAIKRTWPGGPS-PVSVQQDNAPAHKINDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLFFFNSIQSLQDRTTLRTV 188
            M NVV +DEKWFYM K  + YYL  GE+ P+ K K K  I KVMFLA V RPR+DT+ N  F GKIGIFPFT+  PA+RSS+NR AGTMETK ++ VTK V +  ++D+V PAI+  WP G + P+ +QQDNA  H   DD   V   +  G++IRL  QPPNSPD N+LDL FF +IQSLQ++  L ++
Sbjct:  164 MFNVVHIDEKWFYMSKPSKSYYLVPGEDEPLRKCKSKKFITKVMFLAAVARPRFDTLGNEIFSGKIGIFPFTKLEPAKRSSKNRVAGTMETKPILSVTKEVTRSWLIDKVLPAIRDKWPQGHTGPIFIQQDNAKPHISIDDEQFVQEASRGGFDIRLRFQPPNSPDLNVLDLGFFRAIQSLQEQEVLGSI 353          
BLAST of mRNA_A-nodosum_M_contig1.138.1 vs. uniprot
Match: UPI001C264D25 (uncharacterized protein LOC121774216 n=2 Tax=Salvia splendens TaxID=180675 RepID=UPI001C264D25)

HSP 1 Score: 194 bits (493), Expect = 3.130e-57
Identity = 101/190 (53.16%), Postives = 127/190 (66.84%), Query Frame = 0
Query:    1 MRNVVMVDEKWFYMFKQGQRYYLGAGEELPVHKVKHKSHIQKVMFLAVVGRPRWDTVANRSFDGKIGIFPFTRRVPAQRSSRNRAAGTMETKMVE-VTKAVYKQKMLDEVFPAIKRTWPGGPSP-VSVQQDNAPAHKINDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLFFFNSIQSLQDRTTLRTV 188
            M NVV +DEKWFYM K   RYYL   E+ P    K K +I KVMF+  V RP++D     ++DGK+GIFPFT  +PAQR S+NRA GTMETK +  VTKAV +  ++ ++ PAIK  WP G S  + +QQDNA  H    DP+  A   +DG++I+LI QPPNSPDTNILDL FF +IQSLQ     +TV
Sbjct:  128 MHNVVHIDEKWFYMTKVSDRYYLLPDEDEPYRSCKSKRYITKVMFMCAVSRPQFDANGQATYDGKVGIFPFTEVLPAQRKSKNRARGTMETKAINSVTKAVMRDCLIHKIIPAIKAKWPVGASKDIYIQQDNATPHITAMDPEFQAVAKSDGFDIQLICQPPNSPDTNILDLGFFRAIQSLQHEKPCKTV 317          
BLAST of mRNA_A-nodosum_M_contig1.138.1 vs. uniprot
Match: UPI000B909CC2 (uncharacterized protein LOC110944619 n=1 Tax=Helianthus annuus TaxID=4232 RepID=UPI000B909CC2)

HSP 1 Score: 187 bits (476), Expect = 3.150e-57
Identity = 98/190 (51.58%), Postives = 128/190 (67.37%), Query Frame = 0
Query:    1 MRNVVMVDEKWFYMFKQGQRYYLGAGEELPVHKVKHKSHIQKVMFLAVVGRPRWDTVANRSFDGKIGIFPFTRRVPAQRSSRNRAAGTMETK-MVEVTKAVYKQKMLDEVFPAIKRTWPGGPS-PVSVQQDNAPAHKINDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLFFFNSIQSLQDRTTLRTV 188
            M NVV +DEKWFYM K  + YYL  GE+ P+   K K  I KVMFLA V RPR+DT+ N  F GK+GIFPFT+  PA+RSS+NR  G METK ++ VTK V +  ++D+V PAI+  WP   + P+ +QQDNA      DD   V   +  G++IRL  QPPNSPD N+LDL FF++IQSLQ++  L ++
Sbjct:   14 MFNVVHIDEKWFYMSKSSKGYYLVPGEDEPLRTCKSKKFITKVMFLAAVARPRFDTLGNEIFSGKVGIFPFTKLEPAKRSSKNRVTGNMETKPILSVTKEVTRSWLIDKVLPAIRDKWPQDHTGPIFIQQDNAKPQISIDDEQFVQEASRGGFDIRLSFQPPNSPDLNVLDLGFFHAIQSLQEQEVLGSI 203          
BLAST of mRNA_A-nodosum_M_contig1.138.1 vs. uniprot
Match: UPI000CD8BE7B (uncharacterized protein LOC111908693 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD8BE7B)

HSP 1 Score: 193 bits (490), Expect = 6.890e-57
Identity = 99/190 (52.11%), Postives = 131/190 (68.95%), Query Frame = 0
Query:    1 MRNVVMVDEKWFYMFKQGQRYYLGAGEELPVHKVKHKSHIQKVMFLAVVGRPRWDTVANRSFDGKIGIFPFTRRVPAQRSSRNRAAGTMETK-MVEVTKAVYKQKMLDEVFPAIKRTWPGGPS-PVSVQQDNAPAHKINDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLFFFNSIQSLQDRTTLRTV 188
            M NVV +DEKWFYM K  +RYYL  GE+ P+   K K  I KVMFLA V RPR+D+  N  F GKIGI+PFT  VPA+RSS+NR AGT+ETK ++ V K + K  ++++V   I+  WP G + P+ +QQDN   H   +D + + A + DG++IRL  QPPNSPD N+LDL FF +IQSLQ++  LRT+
Sbjct:  168 MFNVVHIDEKWFYMSKPSKRYYLVPGEDEPLRTCKSKKFITKVMFLAAVARPRFDSSGNEVFSGKIGIYPFTTLVPAKRSSKNRVAGTLETKPILSVNKEITKSWLIEKVLSDIRAKWPRGHTGPIFIQQDNVKPHVDVNDSEFLEAASRDGFDIRLCFQPPNSPDLNVLDLGFFRAIQSLQEQEALRTI 357          
BLAST of mRNA_A-nodosum_M_contig1.138.1 vs. uniprot
Match: UPI000E6FC8C0 (uncharacterized protein LOC113311561 n=1 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E6FC8C0)

HSP 1 Score: 189 bits (481), Expect = 1.000e-56
Identity = 99/191 (51.83%), Postives = 131/191 (68.59%), Query Frame = 0
Query:    1 MRNVVMVDEKWFYMFKQGQRYYLGAGEELPVHKVKHKSHIQKVMFLAVVGRPRWDTVANRSFDGKIGIFPFTRRVPAQRSSRNRAAGTMETK-MVEVTKAVYKQKMLDEVFPAIKRTWPGGPS--PVSVQQDNAPAHKINDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLFFFNSIQSLQDRTTLRTV 188
            M N V +DEKWFYM K+ Q+YYL   E+ P+   K K  I KVMFLAVV RPR+D+  N  F GKIGIFPFT + PAQR+S+NR AGTMETK ++ VTK V +  ++++VFPA++  WP   +  P+ +QQDNA  H   +D + +   + DG++IRL  QPPNSPD N+LDL +F +IQSLQ R    T+
Sbjct:    1 MYNYVHIDEKWFYMTKESQKYYLLPEEDEPLRSCKSKCFITKVMFLAVVARPRYDSANNEEFSGKIGIFPFTFQEPAQRNSKNRTAGTMETKEILSVTKDVIRSCLINKVFPAMRSKWPRSSNMDPIFIQQDNARPHINPNDQEFLEDASKDGFDIRLSFQPPNSPDFNVLDLGYFRAIQSLQYRCAPSTI 191          
BLAST of mRNA_A-nodosum_M_contig1.138.1 vs. uniprot
Match: UPI001C27372B (uncharacterized protein LOC121774291 n=1 Tax=Salvia splendens TaxID=180675 RepID=UPI001C27372B)

HSP 1 Score: 193 bits (491), Expect = 1.170e-56
Identity = 98/190 (51.58%), Postives = 131/190 (68.95%), Query Frame = 0
Query:    1 MRNVVMVDEKWFYMFKQGQRYYLGAGEELPVHKVKHKSHIQKVMFLAVVGRPRWDTVANRSFDGKIGIFPFTRRVPAQRSSRNRAAGTMETKMV-EVTKAVYKQKMLDEVFPAIKRTWPGGPSP-VSVQQDNAPAHKINDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLFFFNSIQSLQDRTTLRTV 188
            M N V +DEKWFY+ K  QRYYL   E  P    K+K++I K+MF+  V RP +       FDGKIGIFPFT +VPA+R+S+NR AGT+ETK +  +TK V KQ +++++ PAI   WP G S  +++QQDNA  H  N DPD  AA T +G+NI+++ QPPNSPDTN+ DL +F +IQSLQ +TT  T+
Sbjct:  159 MHNTVHIDEKWFYITKGSQRYYLAPEENEPHRTCKNKNYISKIMFMCAVTRPLFSDNGEVLFDGKIGIFPFTEQVPAKRNSKNRYAGTLETKPIASITKEVTKQCIINKIIPAIMEKWPEGRSKFITIQQDNAKPHIANHDPDFRAAATQNGFNIQIVQQPPNSPDTNVNDLGWFRAIQSLQLQTTCNTL 348          
BLAST of mRNA_A-nodosum_M_contig1.138.1 vs. uniprot
Match: A0A6P6X993_COFAR (uncharacterized protein LOC113741020 n=2 Tax=Coffea TaxID=13442 RepID=A0A6P6X993_COFAR)

HSP 1 Score: 190 bits (482), Expect = 1.420e-56
Identity = 97/183 (53.01%), Postives = 128/183 (69.95%), Query Frame = 0
Query:    1 MRNVVMVDEKWFYMFKQGQRYYLGAGEELPVHKVKHKSHIQKVMFLAVVGRPRWDTVANRSFDGKIGIFPFTRRVPAQRSSRNRAAGTMETK-MVEVTKAVYKQKMLDEVFPAIKRTWPGGP--SPVSVQQDNAPAHKINDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLFFFNSIQSLQ 180
            M N+V +DEKWFYM K+ ++YYL   EE P+   + K  I KVMFLA V RPR+D   N+ FDGKIGIFPF  + PA+R+S+NR AGT+ETK ++ VTK VY++ ++D V PAI+  WP     SP+ +QQDNA  H    D + + A T +G++IRL  QPPNSPD N+LDL +F +IQSLQ
Sbjct:   58 MFNMVHIDEKWFYMTKESEKYYLHPEEEHPMRTCRSKKFIVKVMFLAAVARPRFDCSRNKHFDGKIGIFPFAFKEPAKRNSKNRVAGTLETKPILSVTKEVYRRCLIDNVLPAIRAKWPQSDVISPIFIQQDNAKPHIDPMDVEFIEAATREGFDIRLSFQPPNSPDMNVLDLGYFRAIQSLQ 240          
BLAST of mRNA_A-nodosum_M_contig1.138.1 vs. uniprot
Match: A0A6A4ZTP8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4ZTP8_9STRA)

HSP 1 Score: 185 bits (470), Expect = 1.930e-56
Identity = 96/189 (50.79%), Postives = 122/189 (64.55%), Query Frame = 0
Query:    1 MRNVVMVDEKWFYMFKQGQRYYLGAGEELPVHKVKHKSHIQKVMFLAVVGRPRWDTVANRSFDGKIGIFPFTRRVPAQRSSRNRAAGTMETKMVEVTKAVYKQKMLDEVFPAIKRTWPGGPS-PVSVQQDNAPAHKINDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLFFFNSIQSLQDRTTLRTV 188
            M + V +DEKWF++ +  +RYYL   EELPV K   K HI KVMFL  V RPRWD   +R +DGKIG +PF     AQR S+NR  G   TK + VTK VY+Q ++D+V PAIK  WPG     + +QQDNA  H    D  + +AG  DGW+I+L  QP  SPD N+LDL FFN+IQSLQ R+  +T+
Sbjct:    1 MLDRVHIDEKWFFLTQINRRYYLWPDEELPVRKCNSKRHIVKVMFLTAVARPRWDFKRHRMWDGKIGTWPFIEHTVAQRRSKNRDKGAPITKPMNVTKKVYRQYLIDKVIPAIKSQWPGQHHHTIYLQQDNAKPHVAVSDSAVCSAGHEDGWDIKLTAQPAMSPDFNVLDLGFFNAIQSLQHRSLTQTI 189          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1.138.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KWV2_9PHAE4.920e-6460.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI000B906F281.080e-5953.16uncharacterized protein LOC110892967 n=1 Tax=Helia... [more]
UPI000B8F27567.450e-5954.74uncharacterized protein LOC110913170 n=1 Tax=Helia... [more]
UPI001C264D253.130e-5753.16uncharacterized protein LOC121774216 n=2 Tax=Salvi... [more]
UPI000B909CC23.150e-5751.58uncharacterized protein LOC110944619 n=1 Tax=Helia... [more]
UPI000CD8BE7B6.890e-5752.11uncharacterized protein LOC111908693 n=1 Tax=Lactu... [more]
UPI000E6FC8C01.000e-5651.83uncharacterized protein LOC113311561 n=1 Tax=Papav... [more]
UPI001C27372B1.170e-5651.58uncharacterized protein LOC121774291 n=1 Tax=Salvi... [more]
A0A6P6X993_COFAR1.420e-5653.01uncharacterized protein LOC113741020 n=2 Tax=Coffe... [more]
A0A6A4ZTP8_9STRA1.930e-5650.79Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..188
e-value: 2.5E-30
score: 107.8
NoneNo IPR availablePANTHERPTHR47169OS01G0541250 PROTEINcoord: 1..187

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1contigA-nodosum_M_contig1:1960746..1961309 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1.138.1mRNA_A-nodosum_M_contig1.138.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1 1960734..1961309 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1.138.1 ID=prot_A-nodosum_M_contig1.138.1|Name=mRNA_A-nodosum_M_contig1.138.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=188bp
MRNVVMVDEKWFYMFKQGQRYYLGAGEELPVHKVKHKSHIQKVMFLAVVG
RPRWDTVANRSFDGKIGIFPFTRRVPAQRSSRNRAAGTMETKMVEVTKAV
YKQKMLDEVFPAIKRTWPGGPSPVSVQQDNAPAHKINDDPDIVAAGTADG
WNIRLINQPPNSPDTNILDLFFFNSIQSLQDRTTLRTV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf