prot_A-nodosum_M_contig1.122.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1.122.1
Unique Nameprot_A-nodosum_M_contig1.122.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length254
Homology
BLAST of mRNA_A-nodosum_M_contig1.122.1 vs. uniprot
Match: D7FMZ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMZ7_ECTSI)

HSP 1 Score: 352 bits (904), Expect = 2.750e-120
Identity = 169/253 (66.80%), Postives = 213/253 (84.19%), Query Frame = 0
Query:    1 MEIDTAKLDVFGAIITQVKMEGRVPASTHLVYDCSHGEWLLAQIAYDRNVRLFSSRSVQQLGSISSSLPDNSRFIFSGALIPKQVKRILKMKGLTAVVANDAEGAMVLDDAMNTERDRLAAKKLSKVSQSRQRFLLEKGGGVDGKRSKEPPTHNIASKLRVFVRMREGQSVEELTDIIGAIDRECTNLDAIGLWGGSMNADMCLNMLEAVRTTSKMSQLRVALDHNGPSSSEWYTALRGPRRGPIMWTFGYDL 253
            ME+DT KL+VFG IIT+VKMEGRVPAS+HLVYDCSHGEWLLAQ+AYDR +RLFSSRSV+QL SISSSLPDNSRFIFSGALIPKQ+KRILKMKGL+AVVA DAE  + ++++++ ER RLAAK LS++SQSR+R+LLEKGGG +G  ++  P  ++ S LR FVR++EGQSV+++ +I+  I++ C N+  +GLWGG M+ + CLNMLEAVRT S +S LRVA++H GP S+ W+T LRG RRGPIMWTF Y+L
Sbjct:   13 MEVDTEKLEVFGTIITEVKMEGRVPASSHLVYDCSHGEWLLAQMAYDRKIRLFSSRSVRQLLSISSSLPDNSRFIFSGALIPKQIKRILKMKGLSAVVARDAESVVAMEESIDAERKRLAAKGLSRISQSRERYLLEKGGGENGA-NQRGPVGSLVSGLRTFVRIQEGQSVDDVAEIVNTIEQTCRNISVVGLWGGDMDPETCLNMLEAVRTKSGISNLRVAMEHLGPKSAGWFTGLRGARRGPIMWTFNYEL 264          
BLAST of mRNA_A-nodosum_M_contig1.122.1 vs. uniprot
Match: A0A836CMK3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMK3_9STRA)

HSP 1 Score: 182 bits (463), Expect = 4.050e-53
Identity = 98/255 (38.43%), Postives = 152/255 (59.61%), Query Frame = 0
Query:    1 MEIDTAKLDVFGAIITQVKMEGRVPASTHLVYDCSHGEWLLAQIAYDRNVRLFSSRSVQQLGSISSSLPDNSRFIFSGALIPKQVKRILKMKGLTAVVANDAEGAMVLDDAMNTERDRLAAKKLSKVSQSRQRFLLEKGGGVDGKRSKEPPTHNIASKLRVFVRMREGQSVEE--LTDIIGAIDRECTNLDAIGLWGGSMNADMCLNMLEAVRTTSKMSQLRVALDHNGPSSS-EWYTALRGPRRGPIMWTFGYD 252
            ++ D  +LD     IT VK +G VPAS+++VYDC+HG+WLL Q+AYDR ++LF+SRS   +  +++ +PD+++ +F+GA +PK  KR+LK++ L +VV  DA  A  L DAM  ER RLAAK LSKVS++R+R+L   GG         PP   +  ++RVF+++ E  S     +   +  +   C  ++ +GLWG    A     +L+ V+      +L+V L + G   S +W   L G  RG I+WTF ++
Sbjct:   47 VDFDIDRLDAMNTYITDVKQKGYVPASSNIVYDCTHGQWLLMQVAYDRKIKLFASRSAAGVADLAAIVPDDAQVLFTGAFLPKHAKRLLKLRNLHSVVVPDAAAARALSDAMADERARLAAKGLSKVSRARERYLTAGGGA-----QLAPPDTAVLERIRVFLKLPEEGSTTAAAVAATLAEVREGCPGVEVMGLWGEGRGA---YALLQEVKAAVNAPKLKVTLPYRGVEESFKWNQGL-GEGRGSIIWTFEFE 292          
BLAST of mRNA_A-nodosum_M_contig1.122.1 vs. uniprot
Match: A0A6V1VHY5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VHY5_HETAK)

HSP 1 Score: 85.1 bits (209), Expect = 1.250e-15
Identity = 67/256 (26.17%), Postives = 121/256 (47.27%), Query Frame = 0
Query:    1 MEIDTAKLDVFGAIITQVKMEGRVPASTHLVYDCSHGEWLLAQIAYDRNVRLFSSRSVQQLGSISSSLPD--NSRFIFSGALIPKQVKRILKMKGLTAVVANDAEGAMVLDDAMNTERDRLAAKKLSKVSQSRQRFLLEKGGGVDGKRSKEPPTHNIASKLRVFVRMREGQSVEELTDIIGAIDRECTNLDAIGLWGGSMNADMCLNMLE--AVRTTSKMSQLRVALDHNGPSSSEWYTALRGPRRGPIMWTFGYD 252
            M+ID   +++F   IT +K   +   +  +  +C+  EW+ AQIA DR +  F SRS   L   + + PD  ++  + +G ++ KQVKR+ K   +  +  ++ E A +L   +  E  R   K+ SKVS SR ++L  K G    K   E   +     LR+    ++ ++ ++L D I AI+++C NL+  G+   S+ +      ++    R   K  Q ++A+  +    + +Y       R  +    G D
Sbjct:   84 MDIDGDAINLFNERITTLK---KALPTARICLECTGLEWIFAQIAQDRGIDAFYSRSATALRKYAETAPDVADATLLLTGKVLEKQVKRLAKFPEVNCIAVSNKEEADILSQGLAAEIARAMKKRRSKVSASRDKYLDAKTGDSRAKGYLESANYI----LRISSEQQD-KAGQQLLDDIEAIEKDCENLNFHGVILDSVESIETYRAIKDKLKRFCHKPDQFKIAIPFDESKDAAFYKDFPTDSRQTLWLVQGKD 331          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1.122.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FMZ7_ECTSI2.750e-12066.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CMK3_9STRA4.050e-5338.43Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6V1VHY5_HETAK1.250e-1526.17Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1contigA-nodosum_M_contig1:1810047..1812644 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1.122.1mRNA_A-nodosum_M_contig1.122.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1 1810047..1812668 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1.122.1 ID=prot_A-nodosum_M_contig1.122.1|Name=mRNA_A-nodosum_M_contig1.122.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=254bp
MEIDTAKLDVFGAIITQVKMEGRVPASTHLVYDCSHGEWLLAQIAYDRNV
RLFSSRSVQQLGSISSSLPDNSRFIFSGALIPKQVKRILKMKGLTAVVAN
DAEGAMVLDDAMNTERDRLAAKKLSKVSQSRQRFLLEKGGGVDGKRSKEP
PTHNIASKLRVFVRMREGQSVEELTDIIGAIDRECTNLDAIGLWGGSMNA
DMCLNMLEAVRTTSKMSQLRVALDHNGPSSSEWYTALRGPRRGPIMWTFG
YDL*
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