mRNA_A-nodosum_M_contig997.28.2 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig997.28.2
Unique NamemRNA_A-nodosum_M_contig997.28.2
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig997.28.2 vs. uniprot
Match: A0A6H5KBQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBQ8_9PHAE)

HSP 1 Score: 468 bits (1204), Expect = 6.190e-156
Identity = 241/352 (68.47%), Postives = 275/352 (78.12%), Query Frame = 1 
Query:  511 RYLSKVRALSSECLKSLSWGETRGGDDNQKRYWRERSESEPRIPETSKPRE---------IDFVDISGPPLEQEHPSSLHYRPYSCEASNPPPQVLQGFKLDYVKLDERSWLEVRDKHHRYGKNLRLYHKEWVRQRRPGGSFFSWLSTPEVQLEGCPRHELESDVVHYCRPEERENYALRLEVTAEGRAMLHTAKGEPVNSGPNAWLFVLRDRTIFATDKKTDPPRFHHSSFFGGGYVEAAGMLVAENGALMTLYPHSGHYRPTNSHLKGLLRFLRGLGVDLSAIQVDAQRVHKVARPDKR-SERRVRKMDNPFMVSGMYLLDFFETKQKAWASSLFVDVRKKARERGDRLH 1536
            R +   RALSS+CL+ L WG+T         + RERS SEPR+ +   PR           D +  SG P ++EH S+L+++ YS EAS PPPQVLQG+K++ V LD+RSWLEVRDK HRYGKNLRLY KEW R+ +PGGSFF WLS  EVQLEGCPRHELESDVVHYCRPEER NYALRL+VT EGRA+LHTA+GEPVN GP+AWLFVLRD+T+FAT KKTDPPRFHHSSFFGGGYVEAAGMLVAE G L TLYPHSGHYRPTN HL+ LL+FL GLGVDL A++VDAQRVHKVARPDKR S  RVRKMDNPFMVS  YLLDFFE K  AW+S  F ++  K  ER +RLH
Sbjct:  205 RRIGYFRALSSQCLEGLDWGDTGA------HHRRERSGSEPRVSQDP-PRSSGFDLLDYSTDLLGCSGAPSDREHSSTLYHQ-YSNEASAPPPQVLQGWKMNCVALDKRSWLEVRDKQHRYGKNLRLYFKEWDRRGKPGGSFFKWLSAAEVQLEGCPRHELESDVVHYCRPEERHNYALRLDVTPEGRAILHTAQGEPVNCGPSAWLFVLRDQTLFATGKKTDPPRFHHSSFFGGGYVEAAGMLVAEEGVLKTLYPHSGHYRPTNQHLRVLLKFLNGLGVDLDALEVDAQRVHKVARPDKRASYPRVRKMDNPFMVSARYLLDFFEAKYLAWSSCHFDELYLKVNERHERLH 548
[Close]
BLAST of mRNA_A-nodosum_M_contig997.28.2 vs. uniprot
Match: A0A7S2SKQ1_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SKQ1_9STRA)

HSP 1 Score: 237 bits (605), Expect = 2.840e-67
Identity = 114/250 (45.60%), Postives = 160/250 (64.00%), Query Frame = 1 
Query:  751 NPPPQVLQGFKLDYVKLDERSWLEVRDKHHRYGKNLRLYHKEWVRQRRPGGSFFSWLSTPEVQLEGCPRHELESDVVHYCRPEERENYALRLEVTAEGRAMLHTAKGEPVNSGPNAWLFVLRDRTIFATDKKTDPPRFHHSSFFGGGYVEAAGMLVAENGALMTLYPHSGHYRPTNSHLKGLLRFLRGLGVDLSAIQVDAQRVHKVARPDKRSERRVRKMDNPFMVSGMYLLDFFETKQKAWASSLFVDV 1500
            +PP +V +G +  + +LD R+WLEV D  HRY K+LR Y++ W    RPG  F SWL T   +L+ CPR  LE+D VHYC  EERE YA+ +E    GR         PV++G   W+FV+RD  ++A +K+T+PPRFHHSSFF G  VE AG+ VA +G +  ++PHSGHYRP ++ +  LL+FL    +DLS+++VDAQ   KVAR  +R   +++K D P  + G  LL F E K  AW++ LF ++
Sbjct:  240 DPPDEVTRGLREGFSQLDRRAWLEVLDPKHRYAKHLRAYYQAWDLLDRPGSDFLSWLDTAGFELDSCPRSVLEADTVHYCSEEEREQYAIDIE---GGRVWFRGGDRRPVDTGSKGWIFVVRDGVVYAAEKRTEPPRFHHSSFFSGQCVEVAGLFVARDGWVCRVFPHSGHYRPGDTQIMHLLKFLDQRHLDLSSVEVDAQHTMKVARLLRREGNKMKKTDCPHFMRGDALLHFLERKFSAWSTPLFNEL 486
[Close]
BLAST of mRNA_A-nodosum_M_contig997.28.2 vs. uniprot
Match: A0A4D9DCJ4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DCJ4_9STRA)

HSP 1 Score: 228 bits (582), Expect = 3.420e-66
Identity = 119/240 (49.58%), Postives = 160/240 (66.67%), Query Frame = 1 
Query:  799 LDERSWLEVRDKHHRYGKNLRLYHKEWVRQRRPGGSFFSWLSTPEVQLEGCPRHELESDVVHYCR-PEERENYALRLEVTAEGRAMLHTAK---GEPVNSGPNAWLFVLRDRTIFATDKKTD-PPRFHHSSFFGGGYVEAAGMLVAENGALMTLYPHSGHYRPTNSHLKGLLRFLRGLGVDLSAIQVDAQRVHKVARP-DKRSERRVRKMDNPFMVSGMYLLDFFETKQKAWASSLFVDV 1500
            +D R+WLEV D+ HRY KNLRLY+KEW R+ +PG SF+SWL    V+LE C R +LE++ V+YC   ++RE +    EV  +   +LH  +   G+ V +GP+ W+FVLRD  ++A +KKTD PPRFHHSSFF G  V+AAG+ VA  G L  LYPHSGHYRP++SHL  LL FL    VD++ +QVD Q V KVAR  D     R RK+D+P+M +G++   F   K+ AW   LF ++
Sbjct:  148 IDRRAWLEVEDRKHRYAKNLRLYYKEWDRRGQPGSSFWSWLDEERVELEECSRAQLEAETVYYCSFTKDREAF----EVQFDEHGLLHQGQAGAGDLVETGPDGWIFVLRDGLVYAHEKKTDQPPRFHHSSFFAGECVQAAGLFVATGGVLERLYPHSGHYRPSDSHLLSLLLFLEAQHVDMAVMQVDVQLVMKVARSHDATKGGRRRKIDSPYMWTGLHAKYFLLAKRYAWDKKLFDEM 383
[Close]
BLAST of mRNA_A-nodosum_M_contig997.28.2 vs. uniprot
Match: W7U6C7_9STRA (Calmodulin binding protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U6C7_9STRA)

HSP 1 Score: 225 bits (574), Expect = 1.160e-63
Identity = 118/240 (49.17%), Postives = 159/240 (66.25%), Query Frame = 1 
Query:  799 LDERSWLEVRDKHHRYGKNLRLYHKEWVRQRRPGGSFFSWLSTPEVQLEGCPRHELESDVVHYCR-PEERENYALRLEVTAEGRAMLHTAKG---EPVNSGPNAWLFVLRDRTIFATDKKTD-PPRFHHSSFFGGGYVEAAGMLVAENGALMTLYPHSGHYRPTNSHLKGLLRFLRGLGVDLSAIQVDAQRVHKVARP-DKRSERRVRKMDNPFMVSGMYLLDFFETKQKAWASSLFVDV 1500
            +D R+WLEV D+ HRY KNLRLY+KEW R+ +PG SF+SWL    V+LE C R +LE++ V+YC   ++RE +    EV  +   +LH  +    + V +GP+ W+FVLRD  ++A +KKTD PPRFHHSSFF G  V+AAG+ VA  G L  LYPHSGHYRP++SHL  LL FL    VD++ +QVD Q V KVAR  D     R RK+D+P+M +G++   F   K+ AW   LF ++
Sbjct:  272 IDRRAWLEVEDRKHRYAKNLRLYYKEWDRRGQPGSSFWSWLDEERVELEECSRAQLEAETVYYCSFTKDREAF----EVQFDEHGLLHQRQAGAWDLVETGPDGWIFVLRDGLVYAHEKKTDQPPRFHHSSFFAGECVQAAGLFVATGGVLERLYPHSGHYRPSDSHLLSLLLFLEAQHVDMALMQVDVQLVMKVARSHDATKGGRRRKIDSPYMWTGLHAKYFLLAKRYAWDKKLFDEM 507
[Close]
BLAST of mRNA_A-nodosum_M_contig997.28.2 vs. uniprot
Match: A0A067CMQ2_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CMQ2_SAPPC)

HSP 1 Score: 215 bits (547), Expect = 1.160e-61
Identity = 111/250 (44.40%), Postives = 155/250 (62.00%), Query Frame = 1 
Query:  760 PQVLQGFKLDYVKL-DERSWLEVRDKHHRYGKNLRLYHKEWVRQRRPGGSFFSWLSTPEVQLEGCPRHELESDVVHYCRPEERENYALRLEVTAEGRAMLHT-AKGEPVNSGPNAWLFVLRDRTIFATDK-KTDPPRFHHSSFFGGGYVEAAGMLVAENGALMTLYPHSGHYRPTNSHLKGLLRFLRGLGVDLSAIQVDAQRVHKVARPDKRSERRVRKMDNPFMVSGMYLLDFFETKQKAWASSLFVDV 1500
            P +++GF    + + D+RSWLEV D+ HRYG NLR Y+KEW R   P   F+ WL    V+++G PR +LES+ V YC   ER+ +AL          ML+T A   PV +G + W+FVLRD  ++ ++K  T  PR HH+S  GG  V+ AGM+V  NG L  +YPHSGHYRP+ + +  LLRFL G G++L  + VD QR+ KV+R ++ +  +V+K+DN    +G   LDF E K   W S LFVD+
Sbjct:   29 PVLVKGFSTGNIAVVDKRSWLEVCDRKHRYGANLRAYYKEWKRYEGPKPGFWEWLDDESVEVDGVPRAKLESETVLYCDKAERQKFALTFR-----DGMLYTVADDAPVETGDDGWIFVLRDGVLYGSEKVTTQVPRIHHTSLSGGECVQTAGMMVVSNGTLNIIYPHSGHYRPSENEVLVLLRFLEGHGIELEDVLVDVQRIQKVSR-ERSNNVKVKKLDNAHFWNGRMALDFLELKDFVWHSDLFVDL 272
[Close]
BLAST of mRNA_A-nodosum_M_contig997.28.2 vs. uniprot
Match: A0A1V9YJX7_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YJX7_9STRA)

HSP 1 Score: 213 bits (542), Expect = 3.780e-61
Identity = 109/256 (42.58%), Postives = 158/256 (61.72%), Query Frame = 1 
Query:  760 PQVLQGFKLDYVKL-DERSWLEVRDKHHRYGKNLRLYHKEWVRQRRPGGSFFSWLSTPEVQLEGCPRHELESDVVHYCRPEERENYALRLEVTAEGRAMLHTAKGEPVNSGPNAWLFVLRDRTIFATDK-KTDPPRFHHSSFFGGGYVEAAGMLVAENGALMTLYPHSGHYRPTNSHLKGLLRFLRGLGVDLSAIQVDAQRVHKVARPDKRSERRVRKMDNPFMVSGMYLLDFFETKQKAWASSLFVDVRKKARER 1521
            P +++GF    V + D+RSWLEV D+ HRYG NLR Y+KEW R   P   F+ WL    +++EG PR +LES+ V YC   +R+ +AL       G  ++ TA   PV++G + W+FVLRD  ++ ++K  T  PR HH+S  GG  V+ AGM+V  NG L  +YPHSGHYRP+ + +  LLRFL+  G+ LS + VD QR+ KV+R ++ +  +V+K++N    +G   LDF E K   W S LF D+ +   +R
Sbjct:   23 PVLVKGFSSGNVAVVDKRSWLEVCDRKHRYGANLRAYYKEWKRYEGPKPGFWEWLDDETIEVEGVPRTKLESETVLYCDKTQRQKFALGF----HGGMLVTTADMAPVDTGDDGWIFVLRDGVLYGSEKVTTQVPRIHHTSLSGGECVQTAGMMVVSNGTLNIIYPHSGHYRPSENEVLVLLRFLQAHGIVLSDVLVDVQRIQKVSR-ERTNNAKVKKLENAHFWNGQQALDFLELKDFVWHSDLFADLERTVAQR 273
[Close]
BLAST of mRNA_A-nodosum_M_contig997.28.2 vs. uniprot
Match: A0A2D4BS79_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BS79_PYTIN)

HSP 1 Score: 203 bits (517), Expect = 2.290e-57
Identity = 111/250 (44.40%), Postives = 153/250 (61.20%), Query Frame = 1 
Query:  760 PQVLQGFKLDYVKL-DERSWLEVRDKHHRYGKNLRLYHKEWVRQRRPGGSFFSWLSTPEVQLEGCPRHELESDVVHYCRPE-ERENYALRLEVTAEGRAMLHTAKGEPVNSGPNAWLFVLRDRTIFATDKKTDP-PRFHHSSFFGGGYVEAAGMLVAENGALMTLYPHSGHYRPTNSHLKGLLRFLRGLGVDLSAIQVDAQRVHKVARPDKRSERRVRKMDNPFMVSGMYLLDFFETKQKAWASSLFVDV 1500
            P++++G+    + + D++SWLEV D+ HRYG NLR Y+KEW RQ     SF+ WL    +++EG PR +LE + V YC  + ER+ +AL +    +GR + H    E V SG   W+FVLRD  ++   K+T   PR HH+SF  G  V+ AGM+V +NG + T+YPHSGHYRP+   L  LLRFL   GVD+S ++VD QR+ KV R D  +  RVRK+DN        +L F E K  AW   LF D+
Sbjct:   28 PKLVKGYSAGNISVVDKKSWLEVCDRKHRYGANLRAYYKEWKRQAATP-SFWEWLDDESIEVEGVPRTKLERETVLYCDTDAERQKFALTIR---DGR-VFHVLSQEIVESGEEGWIFVLRDGVLYGGQKETKKIPRIHHTSFVAGECVQTAGMMVIKNGVIETIYPHSGHYRPSEHELLVLLRFLVAQGVDMSQVRVDVQRIQKVFR-DTVNGTRVRKIDNAHFWDAYRVLFFLEQKHLAWKIGLFDDI 271
[Close]
BLAST of mRNA_A-nodosum_M_contig997.28.2 vs. uniprot
Match: A0A067CYU2_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CYU2_SAPPC)

HSP 1 Score: 202 bits (513), Expect = 2.500e-57
Identity = 111/257 (43.19%), Postives = 154/257 (59.92%), Query Frame = 1 
Query:  760 PQVLQGFKLDYVKL-DERSWLEVRDKHHRYGKNLRLYHKEWVRQRRPGGSFFSWLSTPEVQLEGCPRHELESDVVHYCRPEERENYALRLEVTAEGRAMLHTAKGEP-VNSGPNAWLFVLRDRTIFATDKKT-DPPRFHHSSFFGGGYVEAAGMLVAENGALMTLYPHSGHYRPTNSHLKGLLRFLRGLGVDLSAIQVDAQRVHKVARPDKRSERRVRKMDNPFMVSGMYLLDFFETKQKAWASSLFVDVRKKARER 1521
            P + +GF    V + D+RSWLEV D+ HRYG NLR Y+KEW  +  P   F+ WLS   V++EG PR +LE + V Y    ER+ YAL +        +LH ++ +  +++G   W+FVLRD  ++ + K T   PR HH+SF GG  V+ AG+LV   G L T+YPHSGHYRP+ S +  LLRFL   GV L  ++VD QR  KV+R ++ S  +V KM N      + +L F   K+KAWA +LF D+   A+ R
Sbjct:   37 PVLARGFSTGNVAIVDKRSWLEVCDRKHRYGANLRAYYKEWKHRDGPKPDFWEWLSDESVEVEGVPRAKLEKETVLYYDKTERQKYALDIRY-----GLLHASRTQALIDTGEEGWIFVLRDGVLYGSAKVTKQTPRVHHTSFVGGECVQTAGILVIAQGVLTTIYPHSGHYRPSESEVLLLLRFLHEKGVRLDDVRVDVQRFQKVSR-ERASVAKVSKMANAHFWPALDVLQFLAAKEKAWAGTLFDDIEIAAKNR 287
[Close]
BLAST of mRNA_A-nodosum_M_contig997.28.2 vs. uniprot
Match: A0A1V9Y7I8_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y7I8_9STRA)

HSP 1 Score: 201 bits (511), Expect = 1.550e-56
Identity = 104/256 (40.62%), Postives = 153/256 (59.77%), Query Frame = 1 
Query:  760 PQVLQGFKLDYVKL-DERSWLEVRDKHHRYGKNLRLYHKEWVRQRRPGGSFFSWLSTPEVQLEGCPRHELESDVVHYCRPEERENYALRLEVTAEGRAMLHTAKGEPVNSGPNAWLFVLRDRTIFATDK-KTDPPRFHHSSFFGGGYVEAAGMLVAENGALMTLYPHSGHYRPTNSHLKGLLRFLRGLGVDLSAIQVDAQRVHKVARPDKRSERRVRKMDNPFMVSGMYLLDFFETKQKAWASSLFVDVRKKARER 1521
            P +++GF    + + D+RSWLEV D+ HRYG NLR Y+KEW R   P   F+ WL    V++EG PR +LES+ V YC   ER+ +AL       G  +  T + +PV++  + W+FVLRD  ++  +K  T  PR HH+S  GG  V+ AGM+V   G L  +YPHSGHYRP+ + +  LLRFL+  G+ L  + VD QR+ KV+R ++    +V+K++N    +    LDF E K   W S LF ++ ++  +R
Sbjct:   23 PVLVKGFSSGNIAVVDKRSWLEVCDRKHRYGANLRAYYKEWKRYEGPKPGFWEWLDDESVEVEGVPRTKLESETVLYCDKAERQKFALNF---LHGMLVTSTTQ-QPVDTADDGWIFVLRDGVLYGNEKVTTQVPRIHHTSLSGGECVQTAGMMVVTKGILNIIYPHSGHYRPSENEVLVLLRFLKSHGIVLENVLVDVQRIQKVSR-ERSDNVKVKKLENAHFWNAQQALDFLELKDFVWHSDLFTELERRVAQR 273
[Close]
BLAST of mRNA_A-nodosum_M_contig997.28.2 vs. uniprot
Match: A0A1W0A215_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A215_9STRA)

HSP 1 Score: 198 bits (504), Expect = 5.560e-56
Identity = 105/243 (43.21%), Postives = 150/243 (61.73%), Query Frame = 1 
Query:  799 LDERSWLEVRDKHHRYGKNLRLYHKEWVRQRRPGGSFFSWLSTPEVQLEGCPRHELESDVVHYCRPEERENYALRLEVTAEGRAMLHTAKG-EPVNSGPNAWLFVLRDRTIFATDKKTDP-PRFHHSSFFGGGYVEAAGMLVAENGALMTLYPHSGHYRPTNSHLKGLLRFLRGLGVDLSAIQVDAQRVHKVARPDKRSERRVRKMDNPFMVSGMYLLDFFETKQKAWASSLFVDVRKKARER 1521
            +D+RSWLEV D+ HRYG NLR Y+K W R   P   F+ WLS   V++EG PR +LE + V Y    ER+ +A+ +        +LH A   E +++G   W+FVLRD  ++ + K T   PR HH+SF GG  V+ AG++V E G L  +YPHSGHYRPT S +  LLRFL G GV L+ ++VD QR  KV+R ++ +  ++ K  N      +++L+F + K+KAWA +LF D+   A+ R
Sbjct:   53 VDKRSWLEVCDQKHRYGGNLRAYYKAWKRCDDPKPEFWEWLSDESVEVEGVPRTKLEKETVVYYNKTERKQFAMDIRY-----GLLHKASTPELIDTGEEGWIFVLRDGVLYGSAKVTKQVPRIHHTSFVGGECVQTAGIMVIEQGVLKVIYPHSGHYRPTESEVLVLLRFLLGRGVRLNDVEVDVQRFQKVSR-ERDNVSKISKKANAMFWPALHVLNFLQVKEKAWAGTLFDDLEMAAKNR 289
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig997.28.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KBQ8_9PHAE6.190e-15668.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2SKQ1_9STRA2.840e-6745.60Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A4D9DCJ4_9STRA3.420e-6649.58Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7U6C7_9STRA1.160e-6349.17Calmodulin binding protein n=1 Tax=Nannochloropsis... [more]
A0A067CMQ2_SAPPC1.160e-6144.40Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A1V9YJX7_9STRA3.780e-6142.58Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A2D4BS79_PYTIN2.290e-5744.40Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A067CYU2_SAPPC2.500e-5743.19Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A1V9Y7I8_9STRA1.550e-5640.63Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A1W0A215_9STRA5.560e-5643.21Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig997contigA-nodosum_M_contig997:233998..247920 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog112098.XP_008606824.1
Model size1572
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons8
Evalue1.45e-61
EggNOG OGs28J6G@1|root,2QS9S@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-23_003360.1
Cds size1569
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig997.28.2prot_A-nodosum_M_contig997.28.2Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig997 233998..247918 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870544.058473-CDS-A-nodosum_M_contig997:233997..2346401680870544.058473-CDS-A-nodosum_M_contig997:233997..234640Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig997 233998..234640 +
1680870544.073017-CDS-A-nodosum_M_contig997:242684..2428061680870544.073017-CDS-A-nodosum_M_contig997:242684..242806Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig997 242685..242806 +
1680870544.0837061-CDS-A-nodosum_M_contig997:244108..2442161680870544.0837061-CDS-A-nodosum_M_contig997:244108..244216Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig997 244109..244216 +
1680870544.0943885-CDS-A-nodosum_M_contig997:245830..2459981680870544.0943885-CDS-A-nodosum_M_contig997:245830..245998Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig997 245831..245998 +
1680870544.1055555-CDS-A-nodosum_M_contig997:246458..2465771680870544.1055555-CDS-A-nodosum_M_contig997:246458..246577Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig997 246459..246577 +
1680870544.1182494-CDS-A-nodosum_M_contig997:246888..2471141680870544.1182494-CDS-A-nodosum_M_contig997:246888..247114Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig997 246889..247114 +
1680870544.132352-CDS-A-nodosum_M_contig997:247493..2476161680870544.132352-CDS-A-nodosum_M_contig997:247493..247616Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig997 247494..247616 +
1680870544.1420681-CDS-A-nodosum_M_contig997:247858..2479181680870544.1420681-CDS-A-nodosum_M_contig997:247858..247918Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig997 247859..247918 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig997.28.2

>prot_A-nodosum_M_contig997.28.2 ID=prot_A-nodosum_M_contig997.28.2|Name=mRNA_A-nodosum_M_contig997.28.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=523bp
ATSPTKPQISAATPVAYCSPQAVIVSCRVITTAHLVKKAMLEDAAGQRQP
SSLIGGCSLQRLGSENEEPLTETEQCSDTTSDSETSSSESSVMGSNSMYA
FDAPDNSITPSGRIECDFSGAATTRSSATDKADAKDCARTSFPRVTENTG
QTGTMTDDVDGGESDRERSSRYLSKVRALSSECLKSLSWGETRGGDDNQK
RYWRERSESEPRIPETSKPREIDFVDISGPPLEQEHPSSLHYRPYSCEAS
NPPPQVLQGFKLDYVKLDERSWLEVRDKHHRYGKNLRLYHKEWVRQRRPG
GSFFSWLSTPEVQLEGCPRHELESDVVHYCRPEERENYALRLEVTAEGRA
MLHTAKGEPVNSGPNAWLFVLRDRTIFATDKKTDPPRFHHSSFFGGGYVE
AAGMLVAENGALMTLYPHSGHYRPTNSHLKGLLRFLRGLGVDLSAIQVDA
QRVHKVARPDKRSERRVRKMDNPFMVSGMYLLDFFETKQKAWASSLFVDV
RKKARERGDRLHRASTESSCEIG
back to top

mRNA from alignment at A-nodosum_M_contig997:233998..247920+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig997.28.2 ID=mRNA_A-nodosum_M_contig997.28.2|Name=mRNA_A-nodosum_M_contig997.28.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=13923bp|location=Sequence derived from alignment at A-nodosum_M_contig997:233998..247920+ (Ascophyllum nodosum dioecious)
GCCACATCTCCAACCAAACCACAAATCTCAGCAGCTACACCGGTCGCGTA
TTGCTCGCCACAGGCAGTCATCGTCAGCTGCAGGGTGATCACGACAGCAC
ATTTGGTAAAAAAAGCTATGTTGGAGGACGCGGCGGGCCAAAGACAGCCA
TCATCCCTGATCGGTGGCTGCTCGCTGCAACGTTTAGGATCAGAAAATGA
AGAACCGCTCACAGAGACGGAGCAGTGTTCAGACACAACCAGCGACAGCG
AAACATCTTCGTCCGAATCATCGGTAATGGGCTCCAATTCCATGTACGCT
TTCGACGCGCCCGATAATTCTATCACACCTTCCGGCCGGATCGAGTGCGA
CTTTTCCGGTGCGGCCACCACGAGATCTTCAGCAACGGACAAAGCGGACG
CGAAAGACTGCGCCCGCACATCATTCCCACGTGTAACAGAAAATACCGGT
CAAACAGGGACGATGACCGATGACGTCGACGGCGGTGAATCCGATCGAGA
GCGATCTTCTCGATACTTGAGCAAGGTTCGAGCTCTCTCCTCCGAGTGCC
TGAAGAGTCTGAGTTGGGGCGAGACACGAGGCGGTGATGACAATCAGAAG
CGCTACTGGAGAGAGAGGTCAGAGAGCGAGCCACGAATCCCAGGTGCGTA
GAACTGTTTGTACTAAAACTGTATGTGCCTAATAAGAGATGCACTTGTAC
TATAATTCTCGCAGTTGTAAAACGTCGGTTCAACCACCACGTACATATAG
CTATCGTTATCCCTCTCCTTATGATGCTCGTCAGTTTTCACACATGTTGG
TGAAAGAGAAATAAAGGGAAAATCTACCCATTGATCCGCCGACCGCGGAG
GATAAGCTTACTCGTATTTCCCTCTGGGAACGACATCTTTCGTCGATCGT
GGCTGGCTCATCACGCTGGCTCGTGTGGCTGCTCCTTCGACGTCCGCGAT
CGCTCGTCTACGCGCACGGTGGACCCCATTTTACTTTTTCGGGAAAGGAT
TTTTTTCTTTTTTTTCTTTTTTTTTTCTTGATTCTATCTACAATGGTTGT
CAATCGACGTAGGTTCGTACAGGCGCCTGGCGCCCCTTGGTGTTTGTCCC
TAACTACAATACAGTTCTAGACTACTGTCCTGTATTATTTGTATTATAAA
AGCGCTGATGGCGGTAGATCATCATCGACGTGGTGGTTGTTGTTGTTGTT
GTTGATTCACACATTCAGCGTATTGTCCTTGCAACTGCAGAAACTACGGT
GACACAACAAGTCAGGTGGTCCAAAATGTAGAAGTTTAGAATCCACTCAG
TAGTAGTATCAGTTTATTAGTACTACTACTGTACCTGGTACGAAATACTT
CGAAGACCTACTATAGACCGAAAAAACTCCGTTATTTTTTGTCGCAAGTA
GTTGCACTCCCAACAAGAGCGACATTTTTTCCCCCTGACTGGGGGATGCT
CAGAAGGTCTAGGTGTATTCAGATTTTTTTTTAAATAGCTAGTAGGATAG
GAGGACATACAGGTACAAGTACATTCCTGCAACTCGGTACAGTACCTCTG
AGGTGCCACATTCATGCATGGAGACCTGAACAAGCGTGGTTTGAAAATCG
AATCTTCCGAGTCCTCCAGTACGCAAATTCAATATTCGGTCCGATTCCAT
TGTATCGTACCTAACAGTACATCAGAACAAAAGTTCGAAGCGTCGTTTCC
CGTACGGACGCCGTAGCTCTTTCTTTCTTTGAAATTCTAAATTTATGCAC
TTTCAATTTTTTTTAACCAGTCAGCCGTTTCCCTTCTTTTAGGATCAATG
ATACCACCTGCCCGGATACTTGCGAGCTTGCCAGCGAAAGATTGCTGCCG
ACATAGCGCGCCTAAAAATTCTGCGGCCGGAAAATACTGCGGCCGGTGTC
ACAGGCAGGACTTGTTTCTGCGAAGAAGCTCTCTCCAGATCCCACAAAAA
GGAATATGTTCCACTACAGGAATACTTGTAGTTTGTAGTACTACTACTGT
TCTGTAGTATTCATAGGAGGACCGTTTGTACAACAAGTGTTAAAACAAGA
TACAGTACATAGACTTCCTGCTTCTGCAGCCGGGGCCACATTGAAGTTAC
CGTGGTGTCTGACGAAAACGGTGTGAGCCACTGCTGTTGTCTGTGACCCG
CTCTGAGGGGCTTGATTTTTTTTCTCTCCTCTCTCTCAACACTATGATAC
TGTTTGTTGTATCCTCCGAAAAATTGCTGTCGGTTTACCCAGCTGGAATT
GGAGAAAATACGTGTGCTGTGTTAAAGAGACTCTAGCAGTTTCGTGCTTA
TTACCAGGAAGTACTCGTCGTATCATATGCATTTTGCGGCACATGTAGGT
ACTGTACATACAAGGTGTCGCTGCAGTTTCAGATTCGATTTCTTTTGGGA
GTCTTACCCCGAACTATACTGTCGTGGGCTCATCTCCTTTAATTTGACGT
CAGCAGAGAGACTCTCTCTCGTACGGCAATCCACGTGGTCCTAACCACTA
CTATCAGGTACTTGTCAGCAAAAGATTTGTTTGCAACTATTTTTTGCAAG
CTCTGGATTATTATCCACACAAAACGATTGAATTGATCGATCGCTGGTGG
TTTGGATGGCGCACACGCACCTCCGGTCATGCCCACTGAAAAACTTAATA
TGGTAAACCACGCCAGGGGGGGCACCCACCCGTCTATGCTTTCGACCCGA
GCCGTATTACGACCGTATGATAATGGAAAGTGGACAATTACGACAACAAC
CTCGTTTGTTTATCGTAATACTAGTATTATATCCCTGGAGGTTATCTTCC
TTCGCATCTAGTATTAATATTTTGATTGCCTCATACGGTTTTTAATGGTA
AGACAACGACGGCGGGTTTCTCCCCGACATTATACTGCTGTTGACCCAAT
GTTATTACCATCGGGGAACCCGTTTAAATGCCATGAAGAGGTTTTGTATT
TTCAGCTATTGATCCCACCTAAACGTTTTGACATTTTCCCCCCCTGACTG
GGGGATGCTCAGAAGGTCTAGGTGCATTCAGATTTTTCTTTAAACAACAA
CAGCAAGTATTAGAAAGCAAAAATTTTGTCTCCTTGCCATGTTTATCTGT
AACTAGCTTGATGGCTAATATTATGGTAGTATTATTTTTTCCCTTCCCCT
CCGATCAGATCGGGGGAGGTTTTCTCGTCTGTTATTTTTTTCCTCTCTTT
CTCTTCtTTTTTTTTGTGTTTTTTGGATGTAGCGATGGTATGGAAAGGGA
AGCCTGCGTCTGTGACCACGGGTTCGAGAGATCGGACTTATGTGCGGAAA
TAATAATAATAATAATAATAATAGCGCTGACACCCATCATCATCCGATCC
TAGACCCAAAGTAACAATTTAAATGAGCTGTAATCCAGGCGCATCGTGTC
TTTCGTCTTTGTTTTGTTTGAGTGTCCCTGCATGGTGATTAATTGAAGTG
AACAGTATAACGGCGGGTTTCTTCTCGACATGATACTGTTGACCCAATGT
TACTGCCATAGGGGAACCCGATTAAATGCCATGAAGAGGTTTTGTCTTTG
CAGCCTATATGATCCCACCTAAACGTTTGGCATTTTCTCCCCTGACTGGG
GGGTGCTCAGAAGGTTTAGATGCGTTCACAAACACGCATTCCAAGAAAAA
CGCTGTAAGTAGCCTCACCATGTAAGTAAGTTGGTTGTTGTTGTTGTTGT
CTTCACATTAAAAACCGTTCTGACCTCTATCCAGTACCCTTCTCTTTCTT
ACTCTTCAAGGCAAAGAAACGAATTTCCGTCGTCACACGCTAACCCAAAA
TAAGGTACAGGAAAATAAAATAAAATAAAAAAGACCCAGAGAAAGTCCAA
CACTTGCGAAAAACATATGATACAGGTTGTAAATTGAAATCCCATGTAAG
TTGGTTGTAAATTGAAATCCCACATAATTATTTCAGTACCGTAGTCTATA
TCGTCTTCCGTTCGTCGTAGAGAAGCGGACCTAAATGGAAGAGCAAACTA
GAGGCCGACTGTGCCGTATTATAGAGTAGGTCCCATTCTCTCTCTACACA
CGACAAAAACTTAGAATTTTAAGAAGACCTGCGGATGGCTGTGAGAAGAT
GACCGAGTACGTACGAGTACAGACAACAGAATCCTACAAATAGATGCAAA
AAACAAACAAACAAAAACGTTGGTTGTTGTTTCTCACATTCAGCGTATTG
GTTGCCAACCCGAAAAAACTGCTTCGTACTTCAGTTCACACTGTGGCCAA
TCCTGCTCGTGGTCTGCTGAACAGGGAAGAAGAGGGCAAAAGGAAAAAGT
CTGGCAGCGCATCATCCCCGCCCCCACCCCCCACGCTGTTCGTTCGGAGA
AAAAAATAAAGTAGAATCACGCGACGCATCTACAGGCGCTGCGCAGGTTT
CGATCCGTCTCGCGTCCGCACAAGGATAGCATTAATAACTGCAATTAAAT
GGGATGATGCTACGACTATAGGAAGCACAACTTGTTGATGACTGACTGCA
TATAAATAATCCATTTCCAAACTCAGCTGTCTGTTGTTTGGTTCTCGCTA
CTGTATCCTACTTGTACTCTCCCACTCTCCGGTATATTTTTTGTCATGCT
GGATTGCTGTCTGTACTACTGTATCTGATGTTATCACGACCCCGAAGATT
CCCATGGGAAAACCATCCGTACTATACAGTATTCAAGAAAAATCTGAACG
CAGTACTGTAGTGCACGACAAGAGTACCTAAATGTGTGTATATATACTCT
ACTGCATTATGCTGTATTTATTTCAAGAAACATGTGAACCCATCTAGACC
TTACTGTTGCGGCGGTACAGCAGCCATAAATACAGAATGCGTGCTGCACT
TTCCACTCCAATTTTTAGCTTCACAACCATTTTACCTTCCTATACTACAG
CAGTAGTATTATTAATAGTTTATCAAACATTTGATAGTTGCCGTAATCCC
GAGTATGTCCCGAGTGATAGCAATTCGATAAAGCATGTGTTATCAACTTC
TGCTCATTGCCAACATACGGGAGACGATCCCGCTGAAATCGTGGGAAGAA
GCTGCTTTGGGCTCTAGCTCTCCCCTCCCCGCCCGCCCGCCCCACCTCTG
ACCTACTCCGCAGCCCCAGTTTATTTCCACTTCGCTCTGTACCAGGTGCT
TGTTTATTAATTAATACTGTACCGGTATTCCATCAACATCAGCAGCAAGT
GTGCGTTGTCTGATCTTGGTCTGCAACATTCCGCGAGCCATACGTATACG
CCTGTCACAACCCAAGCAGATCCTATGATGGTTGGACATTTCTCCTGAAG
AATAGTTTTTCTTTTTATCAACCATGGTCAATTTGGCAACCTCACAGACT
GGATTATTCACTTGAAATACGGATTATTCACTTGAAATACAAAAATGTAC
CATTAATTCTGTATTGTACTTCCGTCCGGTCTAAGCCTCCTGCATATTCT
TGGAGAACGTCCCAGCTGTCGGCCTGCCTACAATATGCGGTTTTTGACAG
GTTTGTAATCTAGCGTAGCACGCAGCAGATGGAAACGAACCATCGTAAAC
AAGAGGAGTAAGTCTAATATTTTCCCTGTTTCCCGGAGCCGCTCACCCGA
GGGGAGTGAAGACCAGATCGACGCCGCTGAAATGCCACAAGCGTTTCAGT
TGTCAAGTCTCTGGCTTCCTCCTCTGAAAGCAAAAGGATTGAAAAGGATC
GACCGCCCCTGGTCGCTTCGTTGCTGCACATGGCGCATTTTACGCGCCTC
AGAGGTTGCCCTTAAAATTGAAAATAGCAGTATGCCCGAGTTACTACTGT
AGTACTAATATGTCGAGTATTGTCTGCAGCAGCAGTAGGTGTGGTGTGCA
CTCCACTCACACCAGCTCTACGAATTAATCATGATTATGCCTGCCTGCCG
TAAATGGTAGTAACTCCAGCATTTTTTTTTTTTACGTGAGATTAAGAACT
TGGACGCGGCCAACAACTTTAGATTAAAATTTTATTAGGTGTCTCCTCCC
TGGGCACGTACTACGATTTATTGTTATTGACAACTGTAGTTTTGACAATA
CAATAATATAATAATACAATAGCTCTAATATAACAACAACTAACTGCAGG
CAGGACAGTAATGTCAGGTTCCCTTTCCGAGACGTTTTGCTTCCAAATAA
AAGGCCGTGGCCTGTGGAACACGAAAAGACATCGAAAAGAAGATGCGTAA
TCTGTACTGTTCAAGAAGTGCTGTAGTTTGGTTCAGTGTACCCGTAGCAG
CTAAAACTACACTATTAAGCAGTAAGAGTAAACCAAAACATAACCGCGAC
GACAGTAAGTGGTGACTCAGCCTGCTGCCCTGCACCGTCAAACACGCTAT
TTTATATCGTTGATATTTTTCTCGAATCTTCCGGCCGAAGAGGATCAACA
TGCCCCAGGGCACTCGGGTGCCTTTTGGTAACCTGTTATTCTGTTCAGCG
AGCAATATATGTAGTTCTTCAGCCCCAACCTCTCCCTCGCCCCCCCCTCA
AAAAAGACGGAAGAGTGTGTTTCCACGCCTCCTGTCTCGAGACATCGATG
GTCTTCCTTGCGATCTCGCCAGCTACTTCTTCAGCTGATGTCCTTCACTT
CATCACCACCACCAGTTATGGCGCATGGGTTCAACGGTAGCTAGATATTA
CTGCAGGCTGAGCGTGACTGGCTACTCGTGTGTACTCATACATAAATATT
TTGCAGCAAAAGGCCATCTGCAGTTCATTTCCACCGCTGCATATTAGGAA
TCGACGTGGTCGGAGTCCGTTGAAATGCCCATTCAGCCTGTCTCTAAGAT
ACAGTATACTGATTCAGAAAAACTATGAACGCATCTAAGCCTTCTAATCA
ATCAAAAGGTTTAGATGGGAACGTTGGCTGGAGAGACAAAAGCTCTACAT
GGTATTAAAAGGGTTCCCCAATGTAGTCACATAGGGTCAACAGTATAACA
TCGGGTACAGCATTATTCGCAAACGTCATCAATTATAGCCGCGCCGCAGG
TTGGTATCAATGGCAAACTTGTTTAAAGAAAAATCTGAACGCATCTAAAT
CTTCCAATCAGTCAAAAGGTTTAGGTGGGAACATTGTAACATGGTTTTTC
TTGTCCCTATTAGTGGGGCTAAAAACGAACAGAGAGATGATGCCGGAGCG
TCCTCGAGAGAAGTACGCGACGCCTCCACAGGAAAATGTCTGATAATTTG
GCCGTGCCGTACATCGCCACGACAGATCCGACTTCCGAGGTCTTCTTTTC
CCTCCGTTCCTCTTATATAGACTGTTGTTGTTTTCTTCACATTAACCGAT
CGGGCCTCAACCATACCCATAAACTCTAATATAATATGTTTGGCTTTATT
TCTCTGGATTATTGAAGACTATCCCCCGCTCCCACAGACTTTACGTGGCC
GTCGCTACTCTCCCATCTCGCAGCTGCTGTCCGTGACGACCTTAGGCCAC
TCACTCGTTTGCGCGTTCTTATGGGTAGCGCGCCCAAGCAACTATTGATA
GCGGAGGAGCTAAACAAGTTTTTGACCGAAATTTTTTATTATTTTAGCCC
ACCCAAGTTTCTGAAGAACATTTCCAGCCCACTAACTTTCTTGTTTCACC
GCAGAATCTTTACCGAGCCTCCTTCCACGGCGGCCATATTTTCCCTCCTT
CAACAAGCGATACGCATGGTATCACGTGCGACCATTGGACAATGGGAAGC
ACGGGTGTGTCCCCCTTTAAAGATTGACCTCCTGTTCCCTTTCCTCCGCC
GGTATAGACCTCCTCGACCTTCGTTTTATTTATTGTATGAAACCTTGAAC
TCAAATTTTTTGCTGTGTGTGGTATAAAACCTTGCATTTAAAAAACCCTG
CATTTTCTACCTCGGTGTATGTATGTATGAGCATCACATACATCAAGAGA
AGGATCAAGCCGGTAAGGGTGCCAATCCTGCTCGTCGTCAGCTGACCAGG
GAAAATTAATATTTCTCTGTCCCCGTTCGCGCCTGAGAATATGGCCTCGC
GAGACGGGTTCGGCAGCCCCGTCCCGCGTCAGCCTGCTCATCATCTCCAT
ACTCAGGCTGAATCTGGTGCTTACTTGCGGGATTCCTCCCGAGTTCCGCG
GCGGCGTCCGTTTATTTATTTTAAACCGCCGTACGCCATCGGTCAGTCCC
GAGTTTATCAGGTCACGGAATTGCGTACCGATGGCGTTCACTGCCGAGAG
TCCACCGGCACAGGGCCAGTAGTCCGCAAGGTAGTTCCAGTAACGGGCGC
CGCTTCGGCATCACCATGGACCAAACAATATACGCCGCTCTTTCCCCACC
CGACCCACTAATGGTATGAAGTGGGCATGTTGAAAGTACTGTATCGTCAG
GAACGAACAGGTTGTATGGCAGGGACCACCCCCCTCGGTTGAAATGCATA
CTGTATCCCTCACTACAACAAAGCGTAGTATTATTGAAGTAGACTACTAT
TGAATTGTACCCAGTGTGTTGCAGTACTCATTAATGTTAGTACAAAGTCT
CGGGCGCTACTACGGTGGTATTAATCATTGGTATTCCCCCATATAAATTA
TCCATGATACGAAACTGACTTGACTTGTTTGTATTATGTCTCCGAATCGT
CGTTTTCCCTTTTTCCCGCCTGTCCGAACCAAACCGCCGCACCGACCGAA
CGTAACGAACTTGGAACGTGGTGACGTGGAACGACAGAGACTAGTAAGCC
TCGAGAAATCGACTTCGTCGACATTTCCGGGCCCCCGTTGGAACAAGAGC
ACCCGAGCAGCCTCCATTACCGGCCGTACAGCTGCGAGGCATCCAATCCG
CCACCTCAGGTTGGTCATATTATATCTCGTGAACGGCTGCTTATGTAGTG
TGTAGAGCTATGGACATATTATATCTGCTCAAGTTTGGCCTCGTAAACAG
ACAGGTTGAGGTGCGCCATGCAATTTTCCTATCTGAACGCACAGTCTTTA
TTTGTTTGTTGTTGTTCCGCTAGAGTTGCTTTGTACAGCATGCATTAGAG
ATAATTAAGCAGTACCTACCGTAGAACTCGTACGTCCTTTACGTTTTACG
TGAGTATGTTTGTGCATGTGTATGTATGTACCGGTATGTGTTTTTTGTTT
TCGTTTTTTCACGGATTGACATCTCTACAACAAGTTTATCACAGTACCTG
TACTTGAAACTACGGTACGGTATCTATGCACATAAAGATACATACAGATA
TCTGTGTACCTGGCAGAAGGCTGGCAGATATGTGGGAGCCTGGCTGGAAA
TATATACTTTTTTTTTGTGTCGGAGGGGGGTGTGTCGTGTACACTATCCC
ACCCTTTGTTGAACCAACGACCAGGAGTTCGAACAAAGCGACTGAACCAG
GCGAACCTCGTTGACTTATGGGAGATTTGCAGGCGTATCCATAGATAAAA
AGCTTTTGAGGTTTTTATGCGAAAACACAGTAGGGGTGCATGACGGGCCG
GCGCTGACCACGAAAACAAGTCAGGGTTACATTCCTCTGCGGTCTGTGGA
GCCATAATTGCTGAGTAGAGACGGCCGCCGGATTCTATTGCGCGACATCC
GCATGTCACCATCCTTGCCTCGCGAGCAGAGTATGTATGTGGGGGCGTTT
GGGAAGAAAGGGTTCCCACGTCGAACCGGTGACGCCTGTTGGAAGACGTC
TCGGAGTGGCACCAATTGACAACCTGTTGCGTTTTCTACACAATTAAATA
GTACAGTACGAATTAATTATATCTGCGTCATCCTTGGCTTGGTTCGCGAC
GACGGGTCGATTTTTTTTTGTCTTGAGCCGGGCAGACAATACAGCCTACT
TTTAGGGTCCCTTGTCGATCACAACAACATCCGATCCGCTGCCTCGCTCT
AAAGCACAACTACAACCATGTGAACATCTCCATCCATTATGAACGTCTTT
TGCCATTGTCGTTACAGTAGTGGCTGAATATCCCCTCCCCTGTAAGTCGG
AACACGCTCGTCAAATTGACCGAGCCAGTGGCCCTTGCAAATCAAAGCAT
ATTTCCGTACAGGTATTACACTACATACACAGTGTTACAGTATATTGATA
CCAGTTGGTAACAAGACGATTTCTACACTTGACTAACGAGCCTTTTCCAA
CTACGGTGCAGGTCCTGCAAGGGTTCAAGTTGGACTACGTGAAGCTCGAC
GAGCGGTCATGGTTGGAGGTCCGCGACAAGCACCACCGCTACGGCAAAAA
TCTCCGTCTTTATCACAAGGTTGTTTTATCGCTTCCCTACCTTTTGCAGT
ATTAGTACTGTACACTCTGTACACTGTACACTCTGTACGCTGTACACTCT
GTACGCTGTACACTGCAGATTGTTCTGTACTGTATACGAAGTGTAGTGTT
TTGGGGTGTACTTGTGCTACAGTCCCTAATGAGGGATTACTGTACAGAAT
TATATATATATATGAAAACCGGTACAAGTATATATTTCGCCTTCGATACG
ATCTGTCTGTACACAGTACCCTCTGTACAGTACCGCACATGTCAACCGAC
TCCGATATATATACTTGTGTATTGCACATGCCCAATTTTACCAATAGTGG
GTATGGGAGAAGAGAGGTGCACAAAAACTGGTCCATCGTGATACTTGAAA
AGGCAGCACCTGTTACTGGAACTGCCTTGAGGACTACTGGCCTGGTGCCG
GCGACCTGTCAGCAGTGAACGCCATCGGTACGCAATGGCATGCATGACCT
GATAAACACGGGACCGACTCGAGGGCGTATGGCGGTTTAAATGAATAAAT
GGACTATGACGCCGTCGCGGAAAGCGGGAGGAACTCCGTGAGTAACCACC
AGATTCAGCCTTAGTGTGGAGAATGAGCCGGCTGGCGTGGGACGGGACGG
CTGCGCCCGTCTCGCGAGACCAAATTCTAAGGCGCGAATGGGGACAGGGA
AAAAATATAATTTTTCCCTGTTCAGCTGACCACGAGCAGCGTTTTGATCC
ATACTCTGCGATTGTATGTATGTATGGTCACACATATAGCAAGAGTGTGG
ATCAACCGGGTAAGGTTGCCAATCCTGGTCGTGGTCGGCTGAACAGGGAA
AATTAATATTCCCCTGTCCGCAGAGGTGCTGATCATAACATACTGTACAT
AGCCGGTCGCTCCGGTAGCTCACTTGGCAACCTCTTAACCTTCTAACACG
TTAGGACGTGAGTTCGAATCCCGGTAACTGGGATTTTTGCTCACTAAAAA
AAAAAAAAAAAAAAAATGCTCTAACAAGTGGAGAGCGGTTAATTCGCTGG
TACATAGTATTCGACTTCACGATCGACGAGGGAAAGGAACGGCTGAATCC
CTCTCGCGAGAAATATAAAACATGCACCGCAGAAATACGATGGATGATAA
ATCCTGTGTGACCTTCCTCCTGTGAGACCCCGGCTGGGTTGCAGCGGTCT
TTGCTGCCACAGTACCGGTTATATATTACAGATACTATGTTTTGCAGCAT
TAGGCCGATGTGTCTTCCGCCTCTGGGAGCCAGTTCTTCCCCATGAGAGG
ACCACAAACTACATGTCGGTGGCAAAGCTGGCGTGCCAAGCGGATCACGT
TTCGAACGTTGTACCGGACCCTCATGAAAGGGCTGCACCGTCGGAGTATC
TAGCCCTTTTTGATTCATTCGAAAACAAAGTACACGCGCGAGCGTTGTGT
GCGTTTCTCTCCTTAACTACCAAACCGCGATTGCGTACATCCGGCCGCTC
CCCGTATGTACAGCACACACTTTGTGCACGAATTGGGTAGACGATGTGCT
TGAAAGACAATTTCCCTAATATTATCTTCTCTGGATACTCAATTGTTTGA
TCGTTGCGCCTCTCACGTGCGCGCGTTCCTCAGGAATGGGTTCGGCAAAG
AAGGCCCGGAGGATCTTTCTTCAGTTGGCTGAGTACGCCAGAGGTTCAGC
TTGAAGGGTGCCCGAGGCACGAGCTCGAGAGCGACGTAGTCCACTACTGC
CGCCCGGAGGAGCGTGAGAATTACGCCCTGCGTCTCGAAGTCACGGCCGA
GGTGCGTTGCAATGCGTCAAGGAACGACGGGACGAGGGGGGTATAAAAAG
GGGAAGGGGCGAAAAGTGCTGACGGCCCTGCAGGTGGGAAGGTTGGTGTG
CAATGAACATGATAAATGTTTTCCGCCGAGGGTCGCGTTTTTCACTCAGT
AGACTAGCCGCGTGTTGAAAGGTAGGTGGCCAAGTGGCTGGTACGGCGCA
TAGTGTCACTCATGTCTTGCACTTTCGTGGTTCCCCCGCGGCTTAGCCCC
CAGTCTCATGCCCAAACGCCCGCGCGCATCTTTTGGAATCGCCTGTCTTA
CAGGGGAATGTGGGGTAGTGAAGTGAAGGCCACCTTACCTCTCCGCATGG
ACCACTGCCGCGAAATTCTCAAGAAATTTCCAGCCCCGAACCTCCCCCCC
CTCCCCCCCCCCTCCCCCCCCGCCGGGCCGTCTTTGTCTCTTCCCTCCGT
CGGGACTAAAGGGACGAGCGATGCTGCACACAGCTAAAGGAGAACCCGTG
AACTCCGGCCCGAACGCGTGGCTCTTCGTCCTACGAGATCGCACGATCTT
CGCCACCGATAAGAAGACCGACCCACCACGGTAAACGACCGCTTAGGCGG
AGGCGGGGTGGAGAGATAGCTAAATATTAATAGAACAGCCTCATTCATTT
CGGTCCGACCGTCTCTCCTCTGCCTGTGTCTACAGCATGGCAAGGGGTTG
GTTTGACGTGTCACTCCCCTCACTGTAGGGATTTCGAGGCTAGGTCACAA
GTACGTTTCTAACGCCGGATGCAACAGAGCAAAAGCCATTTTGCCCTAGA
TGATCGACGAAGATCATGCTCCAAGTGTTCATCCGTCATAAAACTCACCA
TCGTCTTTTCTCCCTCCCCCCACCACCCTCTCCACCCCCAGGTTTCACCA
CTCAAGCTTCTTTGGAGGAGGTTATGTCGAGGCCGCGGGGATGCTGGTGG
CCGAGAATGGCGCCCTCATGACCCTGTACCCTCACTCGGGTCACTACCGA
CCGACCAACTCACACTTGAAGGGGCTTCTGCGGTTCCTCAGAGGGCTCGG
GGTCGACCTGAGCGCGATCCAGGTCGACGCGCAGCGGGTGCACAAGGTAG
CGCGGCCAGACAAGAGGGTGAGGGGATTCTTGTTTGTTTGCCCGTGTCTC
CCCTTTCCACCCCTCCGATTATGAATCGGACGTTGGCGCTTACGACTTGA
GACCATTCGTCTACTGACAACGAACAGGGAAAATATGCACACTACTTGTC
GAATGACTTCACGCCCACGTCCGACCCAAATTGTCCTTGAAAGTGGCTGC
TGCGCCGTAGTTTCAGCACGTTTCTTGTGTAAGAGGACAAACCGTGGACG
CAACTATATCACAAAAATTTCACCCCACGTTTGTCGTTTGATGACGTCAT
TGTTTTAATAGTCATTCCTCAAGCCCTTCTTAGGAGCGCACGTGATGGAT
ATTACAATTCAAACAAAACTTGCTCGTCCGCTTATGCGTGAAGCAGTCGG
AGCGACGCGTCCGGAAGATGGACAACCCGTTCATGGTGTCCGGTATGTAC
CTGCTGGACTTCTTCGAGACGAAGCAGAAAGCGTGGGCCTCTTCCCTCTT
TGTAGACGTCCGCAAGAAGGTGCGTCCTTGGGCAGAGAAGGATCGGCAAC
GGTCGCGAGGCCCCTTTTTTGTTTCCTCTGTTAAGGACAAAACATTTTTT
GGGGGCTTTTCGTGTGGAAGGCTAGGATGGTGGCTTGGTGAAACGCCTTG
AAGGCCGCGATAGACCCGCCGACGCTGCAGGGTCTTGACTGATGATCCGC
TCCCCGTCTCCCCTCCCCTGTTCGTTTCGTTTCGTTTTGTCCCAAATATT
TCGTCCCATAGGCAAGAGAACGGGGCGATCGGCTTCATCGCGCGAGCACG
GAAAGCTCTTGCGAAATCGGCGG
back to top

Coding sequence (CDS) from alignment at A-nodosum_M_contig997:233998..247920+

>mRNA_A-nodosum_M_contig997.28.2 ID=mRNA_A-nodosum_M_contig997.28.2|Name=mRNA_A-nodosum_M_contig997.28.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=1569bp|location=Sequence derived from alignment at A-nodosum_M_contig997:233998..247920+ (Ascophyllum nodosum dioecious)
GCCACATCTCCAACCAAACCACAAATCTCAGCAGCTACACCGGTCGCGTA
TTGCTCGCCACAGGCAGTCATCGTCAGCTGCAGGGTGATCACGACAGCAC
ATTTGGTAAAAAAAGCTATGTTGGAGGACGCGGCGGGCCAAAGACAGCCA
TCATCCCTGATCGGTGGCTGCTCGCTGCAACGTTTAGGATCAGAAAATGA
AGAACCGCTCACAGAGACGGAGCAGTGTTCAGACACAACCAGCGACAGCG
AAACATCTTCGTCCGAATCATCGGTAATGGGCTCCAATTCCATGTACGCT
TTCGACGCGCCCGATAATTCTATCACACCTTCCGGCCGGATCGAGTGCGA
CTTTTCCGGTGCGGCCACCACGAGATCTTCAGCAACGGACAAAGCGGACG
CGAAAGACTGCGCCCGCACATCATTCCCACGTGTAACAGAAAATACCGGT
CAAACAGGGACGATGACCGATGACGTCGACGGCGGTGAATCCGATCGAGA
GCGATCTTCTCGATACTTGAGCAAGGTTCGAGCTCTCTCCTCCGAGTGCC
TGAAGAGTCTGAGTTGGGGCGAGACACGAGGCGGTGATGACAATCAGAAG
CGCTACTGGAGAGAGAGGTCAGAGAGCGAGCCACGAATCCCAGAGACTAG
TAAGCCTCGAGAAATCGACTTCGTCGACATTTCCGGGCCCCCGTTGGAAC
AAGAGCACCCGAGCAGCCTCCATTACCGGCCGTACAGCTGCGAGGCATCC
AATCCGCCACCTCAGGTCCTGCAAGGGTTCAAGTTGGACTACGTGAAGCT
CGACGAGCGGTCATGGTTGGAGGTCCGCGACAAGCACCACCGCTACGGCA
AAAATCTCCGTCTTTATCACAAGGAATGGGTTCGGCAAAGAAGGCCCGGA
GGATCTTTCTTCAGTTGGCTGAGTACGCCAGAGGTTCAGCTTGAAGGGTG
CCCGAGGCACGAGCTCGAGAGCGACGTAGTCCACTACTGCCGCCCGGAGG
AGCGTGAGAATTACGCCCTGCGTCTCGAAGTCACGGCCGAGGGACGAGCG
ATGCTGCACACAGCTAAAGGAGAACCCGTGAACTCCGGCCCGAACGCGTG
GCTCTTCGTCCTACGAGATCGCACGATCTTCGCCACCGATAAGAAGACCG
ACCCACCACGGTTTCACCACTCAAGCTTCTTTGGAGGAGGTTATGTCGAG
GCCGCGGGGATGCTGGTGGCCGAGAATGGCGCCCTCATGACCCTGTACCC
TCACTCGGGTCACTACCGACCGACCAACTCACACTTGAAGGGGCTTCTGC
GGTTCCTCAGAGGGCTCGGGGTCGACCTGAGCGCGATCCAGGTCGACGCG
CAGCGGGTGCACAAGGTAGCGCGGCCAGACAAGAGGTCGGAGCGACGCGT
CCGGAAGATGGACAACCCGTTCATGGTGTCCGGTATGTACCTGCTGGACT
TCTTCGAGACGAAGCAGAAAGCGTGGGCCTCTTCCCTCTTTGTAGACGTC
CGCAAGAAGGCAAGAGAACGGGGCGATCGGCTTCATCGCGCGAGCACGGA
AAGCTCTTGCGAAATCGGC
back to top