mRNA_A-nodosum_M_contig996.37.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig996.37.1 vs. uniprot
Match: D7G1P8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1P8_ECTSI) HSP 1 Score: 280 bits (716), Expect = 7.390e-92 Identity = 162/262 (61.83%), Postives = 189/262 (72.14%), Query Frame = 1
Query: 1 MFISLTRSAVRPSNGLIRRAA---------NVAASAV--VPKNVRHASKLSQVLRAELEEERLVSYDEDVASMVKDLKKKGITIKDEPGHSTVRLFGPGVGDEKVTVEFDCD-EGDDGDGWEDDLXXXXXX--HEGTQEVGHLGEDVEDDVDGPDLDGPGESTIRIATITKGAKKMEMMGTATSKISLHGVRVVPANVEADSSLYKGPAFNELDPHVQDGMLDYLKERSVDDDLAAFICMYADQKEQTEYVNWLEEVEKFVK 744
M +L R+A RPS GL+RRAA +V A+AV PKN+R AS LS+VL+AE+EEERLV++DEDVASMVK+L KKGIT+KDEPG S VRLFGPGVGDEKV+VEFDCD EGD DGWEDDL G Q+ G D+ GPG ATITKGAKKM + G+AT I++HG+R+ PANVE D SLY+GP FNELDP +QD + DYLKER++DDDLAAFICMYADQKEQ EY NWL EV KFVK
Sbjct: 1 MLANLARAAARPSAGLVRRAAAATTKCSSPSVPAAAVSSAPKNLRCASSLSEVLKAEIEEERLVAFDEDVASMVKELGKKGITVKDEPGLSLVRLFGPGVGDEKVSVEFDCDVEGDGDDGWEDDLEDDSDLSLESGEQQQGKXXXXXXXXXXEDDMIGPGYRFT--ATITKGAKKMVLSGSATDTIAVHGIRINPANVEWDFSLYRGPDFNELDPDLQDALYDYLKERNIDDDLAAFICMYADQKEQNEYTNWLGEVAKFVK 260
BLAST of mRNA_A-nodosum_M_contig996.37.1 vs. uniprot
Match: A0A7S3XN20_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XN20_HETAK) HSP 1 Score: 79.0 bits (193), Expect = 1.080e-13 Identity = 42/106 (39.62%), Postives = 62/106 (58.49%), Query Frame = 1
Query: 427 DGPGESTIRIATITKGAKKMEMMGTATSKISLHGVRVVPANVEADS-SLYKGPAFNELDPHVQDGMLDYLKERSVDDDLAAFICMYADQKEQTEYVNWLEEVEKFV 741
D P E + T+ KG +++ A +++ V+ + + D+ Y+GP F++LDP +Q LDYL R V DDL A++ MYAD +EQ EYV WLE V+ FV
Sbjct: 176 DLPSEKEFAV-TVAKGEERLRFYCRALDSVAVDAVQHIRPGQDPDAPESYEGPNFDDLDPDLQGAFLDYLAARGVGDDLGAWVVMYADYREQREYVGWLESVKGFV 280
BLAST of mRNA_A-nodosum_M_contig996.37.1 vs. uniprot
Match: A0A7S2XZ29_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZ29_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 1.010e-11 Identity = 69/218 (31.65%), Postives = 102/218 (46.79%), Query Frame = 1
Query: 115 LSQVLRAEL--EEERLVSYDEDVASMVKD----LKKKGITIKDEPGHSTVRLF--GPGVGDEKVTVEFDCDEGDDGDGWEDDLXXXXXXHEGTQEVGHLGEDVEDDVDGPDLDGPGESTIRIATITKGAKKMEMMGTATSKISLHGVRVVPANVEADSSLYKGPAFNELDPHVQDGMLDYLKERSVDDDLAAFICMYADQKEQTEYVNWLEEVEKFVK 744
L +LR EL E+E +D + K LK K + D G STV +F P G EKV+V+F+C ++ E +EV GE ++ G + P + + KG +K+ A I + V + + ++D + Y GP F+ L+ +QD DYL R +D DLA +I M++D KEQ EY+ WLE FVK
Sbjct: 57 LGALLRRELNHEKEEATQIGQDFKDLQKSMEDRLKMKANVLGD--GMSTVEVFIKNPPPG-EKVSVQFNCVS---------EMPGGEDSGEMDEEVAEGGEQGTEE--GEMEEEPPAFKPFMVKVEKGQQKLVFNLLAFDSIVIDSVYIEGGD-DSDMNQYLGPEFDSLETDLQDAFADYLAARGIDADLATWIVMFSDYKEQYEYMKWLETTAAFVK 259
BLAST of mRNA_A-nodosum_M_contig996.37.1 vs. uniprot
Match: A0A8J9RKZ5_9CHLO (Probable mitochondrial acidic protein MAM33 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RKZ5_9CHLO) HSP 1 Score: 73.2 bits (178), Expect = 1.110e-11 Identity = 41/106 (38.68%), Postives = 60/106 (56.60%), Query Frame = 1
Query: 445 TIRIATITKGAKKMEMMGTATS-------KISLHGVRVVPANVEADSSLYKGPAFNELDPHVQDGMLDYLKERSVDDDLAAFICMYADQKEQTEYVNWLEEVEKFV 741
TI +A + + A K + T +SL V+ A+ E + ++Y GP F ELD +Q +DYL+ER V+ +L +I YA+ KEQ EY+ WLE V+KFV
Sbjct: 162 TIEVAVMKEKADKALIFEAETDGEFVRILDVSLESVKDEEADDEDEETIYGGPVFTELDDKLQQAFVDYLEERGVNAELGRYILDYAEDKEQREYMKWLEGVKKFV 267
BLAST of mRNA_A-nodosum_M_contig996.37.1 vs. uniprot
Match: A0A286U6H7_9AGAM (Mitochondrial glyco n=1 Tax=Pyrrhoderma noxium TaxID=2282107 RepID=A0A286U6H7_9AGAM) HSP 1 Score: 73.2 bits (178), Expect = 1.200e-11 Identity = 76/228 (33.33%), Postives = 105/228 (46.05%), Query Frame = 1
Query: 115 LSQVLRAELEEERLVSYDEDVASMVKDLKKKGI-TIKDEPGHSTVRLFGPGVGDEKVTVEFDCDEGDDGDGWEDDLXXXXXXHEGTQEVGHLGEDVEDDVDGPDLDGPG----ESTIRIA-TITK----GAKKMEMM----GTATSKISLHGVRVVPANVEADSS-----LYKGPAFNELDPHVQDGMLDYLKERSVDDDLAAFICMYADQKEQTEYVNWLEEVEKFV 741
L+Q L EL ER S E V +K+ +G+ +I D G V L G E V + F + D TQE E+ E D +GPD +G + +R+A +ITK GA ++ + +S + V + A++ LY GP F LDP VQD +L ER V++ LA FI YA+ KEQTEY+ WLE V+KFV
Sbjct: 71 LAQKLSEELTYEREAS-SEGVPDFIKEFTSQGVWSINDSAGADEVSLVRQ-FGTETVRLMFSIADLD-----------------ATQE-----EEFEVDGEGPDGEGVSGGVTSTPLRVAISITKQSVPGALNVDAVCQDGSFLVENVSFYSDTEVGTQLTAEADWKRRGLYLGPTFENLDPAVQDEFEKFLDERGVNESLALFIPDYAEHKEQTEYIRWLEGVKKFV 274
BLAST of mRNA_A-nodosum_M_contig996.37.1 vs. uniprot
Match: UPI001036140D (mitochondrial acidic protein mam33 isoform X2 n=1 Tax=Camellia sinensis TaxID=4442 RepID=UPI001036140D) HSP 1 Score: 71.2 bits (173), Expect = 2.200e-11 Identity = 30/82 (36.59%), Postives = 53/82 (64.63%), Query Frame = 1
Query: 496 GTATSKISLHGVRVVPANVEADSSLYKGPAFNELDPHVQDGMLDYLKERSVDDDLAAFICMYADQKEQTEYVNWLEEVEKFV 741
G S+ ++H +P++ DSS+YKGP+F+ LDPH+QD + +YL + ++D F+ ++ +KE +YV WL ++E+ V
Sbjct: 118 GDGGSEFAIHNAYYIPSSTCLDSSIYKGPSFSSLDPHLQDELKNYLVAKGIEDMFTNFVLLHLHRKEIGQYVKWLHKLEEIV 199
BLAST of mRNA_A-nodosum_M_contig996.37.1 vs. uniprot
Match: A0A4D6MN05_VIGUN (Mitochondrial glycoprotein n=2 Tax=Vigna unguiculata TaxID=3917 RepID=A0A4D6MN05_VIGUN) HSP 1 Score: 70.9 bits (172), Expect = 2.500e-11 Identity = 31/68 (45.59%), Postives = 46/68 (67.65%), Query Frame = 1
Query: 538 VPANVEADSSLYKGPAFNELDPHVQDGMLDYLKERSVDDDLAAFICMYADQKEQTEYVNWLEEVEKFV 741
+ AN + Y GP F ELD +Q+ + DYL+ER ++D+LAAF+ Y QK++TEYV W+E V+ F+
Sbjct: 124 IRANENIIAEPYSGPQFTELDDELQESLYDYLEERGINDELAAFLHQYMKQKDKTEYVRWMERVKAFI 191
BLAST of mRNA_A-nodosum_M_contig996.37.1 vs. uniprot
Match: I0YK69_COCSC (Mitochondrial glyco protein (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YK69_COCSC) HSP 1 Score: 69.7 bits (169), Expect = 2.000e-10 Identity = 57/198 (28.79%), Postives = 88/198 (44.44%), Query Frame = 1
Query: 205 KGITIKDEPGHSTVRLFGPGVGDEKVTVEFDCDEGDDGDGWEDDLXXXXXXHEGTQEVGHLGEDVEDDVDGPDLD-------GPGESTIRIATITKGAKKMEMMGTATSKISLHGVRVVPANVEA-----------DSSLYKGPAFNELDPHVQDGMLDYLKERSVDDDLAAFICMYADQKEQTEYVNWLEEVEKFVK 744
+G T+ + G+S V L VGDE + V+F +E G+L D ++D DG T+ +A + + A K + T VR++ ++E + ++Y GP F ELD +Q +DYL+ER V+ +L +I YA+ KEQ EY+ WLE V+ FVK
Sbjct: 102 EGWTLTEREGNSKVSLTRE-VGDEAIQVDFVA-----------------------REYGNLSFDEDEDADGXXXXXXXXXDYSDNSMTLEVAVMKEKADKALIFEVETDG---EYVRILDVSLEKVTEDDEPEDEDEETVYGGPVFTELDDKLQTAFIDYLEERGVNAELGRYIVDYAEDKEQREYMKWLEGVKNFVK 272
BLAST of mRNA_A-nodosum_M_contig996.37.1 vs. uniprot
Match: A0A4S4LJE4_9AGAM (Uncharacterized protein n=1 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4LJE4_9AGAM) HSP 1 Score: 68.6 bits (166), Expect = 5.400e-10 Identity = 31/58 (53.45%), Postives = 44/58 (75.86%), Query Frame = 1
Query: 568 LYKGPAFNELDPHVQDGMLDYLKERSVDDDLAAFICMYADQKEQTEYVNWLEEVEKFV 741
LY GP+F+ LDP VQ+ +L ER +++ LA F+ YA+ KEQTEYV+W+E+V+KFV
Sbjct: 219 LYSGPSFDHLDPEVQEEFEKFLDERGINEALAIFLHDYAEYKEQTEYVSWIEKVQKFV 276
BLAST of mRNA_A-nodosum_M_contig996.37.1 vs. uniprot
Match: G0S2I4_CHATD (Uncharacterized protein n=1 Tax=Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) TaxID=759272 RepID=G0S2I4_CHATD) HSP 1 Score: 68.6 bits (166), Expect = 6.060e-10 Identity = 72/226 (31.86%), Postives = 98/226 (43.36%), Query Frame = 1
Query: 115 LSQVLRAELEEERLVSYDEDVASMVKDLKKKGI-TIKDEPGHSTVRLFGPGVGDEKVTVEFDC-------DEGDDGDGWEDDLXXXXXXHEGTQEVGHLGEDVEDDVDGPDLDGPGESTIRIATITKGAKKMEMMGTATSKI--SLHGVR-------VVPANVEADSSLYKGPAFNELDPHVQDGMLDYLKERSVDDDLAAFICMYADQKEQTEYVNWLEEVEKFV 741
LS L +E++ E V D+ + V + + G + DEPG V L G+EK+TV F E D EDDL E +E D+D + P I I KGA +E + + + +L+ + P V A Y GP F LD +Q M YL+ER + DLA F+ Y D KEQ EYV+WL V+KFV
Sbjct: 68 LSAKLASEIQFEDQVKDDQPEPASVSEFLQNGPWELVDEPGQEWVHLKRT-YGNEKITVSFSIADLHNYEPELFDDSAMEDDLDLDQG-RSSQDNANEANESLEADLDQASI--PCRLNIVIEKAGKGALNIEALAQDGAIVVENLYYYKDAKLAHSASPEAVHAAQDAYPGPPFGNLDEDLQILMERYLEERGISQDLAMFVPDYMDIKEQREYVDWLNNVKKFV 289 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig996.37.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig996.37.1 >prot_A-nodosum_M_contig996.37.1 ID=prot_A-nodosum_M_contig996.37.1|Name=mRNA_A-nodosum_M_contig996.37.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=249bp MFISLTRSAVRPSNGLIRRAANVAASAVVPKNVRHASKLSQVLRAELEEEback to top mRNA from alignment at A-nodosum_M_contig996:235269..238209+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig996.37.1 ID=mRNA_A-nodosum_M_contig996.37.1|Name=mRNA_A-nodosum_M_contig996.37.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=2941bp|location=Sequence derived from alignment at A-nodosum_M_contig996:235269..238209+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig996:235269..238209+ >mRNA_A-nodosum_M_contig996.37.1 ID=mRNA_A-nodosum_M_contig996.37.1|Name=mRNA_A-nodosum_M_contig996.37.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=747bp|location=Sequence derived from alignment at A-nodosum_M_contig996:235269..238209+ (Ascophyllum nodosum dioecious)back to top |