|
|
Homology
BLAST of mRNA_A-nodosum_M_contig995.18.1 vs. uniprot
Match: D8LC75_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC75_ECTSI) HSP 1 Score: 190 bits (482), Expect = 9.530e-54 Identity = 129/198 (65.15%), Postives = 139/198 (70.20%), Query Frame = 2
Query: 518 MGRYTTVQAYSDNNPKLVHVSYDQAKGKDDGDGKAGGKLVVEKTDQVMGSCAGAGSGEFHTYRAHRRTEIHRVAAMEESAKKEEAAAKLHEAMEKSRKECEXXXXXXXXXXXXXXXXXXEGPAK---QARTEGAPKDSSSGSAGSGGSASDSGAT-----EEFVYIPLKDQAALGGDGGAPAAFKNDGSFLERMKKEL 1087
MGRYTTVQAYSDNNPKLVHVSYDQAKGKD+ +GKAGGKLVVEKTDQVMGSCAGAGSGEFHTYRAHRR E+HRVAAM+E A+ EA AKLHEA+EK + ECE XXXXXXXXXXXX QA+T S +EFVYIP D A GGDGG+ FKNDGSFLE MKKEL
Sbjct: 1 MGRYTTVQAYSDNNPKLVHVSYDQAKGKDNDEGKAGGKLVVEKTDQVMGSCAGAGSGEFHTYRAHRRREMHRVAAMDEEAQVAEATAKLHEAIEKGKNECEERTRKKXXXXXXXXXXXXXXXXXXXXQAKTGAXXXXXPSXXXXXXXXXXXXXXXXXXXEDEFVYIPEADLATAGGDGGS--GFKNDGSFLEMMKKEL 196
BLAST of mRNA_A-nodosum_M_contig995.18.1 vs. uniprot
Match: A0A835YZ44_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ44_9STRA) HSP 1 Score: 100 bits (250), Expect = 6.150e-21 Identity = 55/94 (58.51%), Postives = 66/94 (70.21%), Query Frame = 2
Query: 518 MGRYTTVQAYSDNNPKLVHVSYDQAKGKDDGDGKAGGKLVVEKTDQVMGSCAGAGSGEFHTYRAHRRTEIHRVAAMEESAKKEEAAAKLHEAME 799
MGRYTTVQAYSD+NPK+ VSY+QA + A G+L +K D VMGS AGAGSGEFH YRA RR EIHR+AA+E +AK +E L +E
Sbjct: 1 MGRYTTVQAYSDSNPKVAKVSYEQATQGGEKHTTASGRLQTDKVDNVMGSTAGAGSGEFHMYRAARRREIHRMAAIEAAAKADEERRALEATIE 94
BLAST of mRNA_A-nodosum_M_contig995.18.1 vs. uniprot
Match: A0A6S9D7T2_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9D7T2_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 2.600e-20 Identity = 82/199 (41.21%), Postives = 93/199 (46.73%), Query Frame = 2
Query: 518 MGRYTTVQAYSDNNPKLVHVSYDQAKGKDDGDGKAGGKLVV--EKTDQVMGSCAGAGSGEFHTYRAHRRTEIHRVAAMEESAKKEEAAAKLHEAMEKSRKECEXXXXXXXXXXXXXXXXXXEGPAKQARTE----GAPKDSSSGSAGSGGSASDSGATEEFVYIPLKDQAALGGDG--GAPAAFKNDGSFLERMKKELA 1090
MGRYTTVQAY+DNNP + VSYDQA GK + G V EK D GS AGAGSGEFH YR R E+ R+A +E EE LHE EK + E E X + G +D + G GG EEF Y P Q GD FKNDGSFLE MKK+LA
Sbjct: 1 MGRYTTVQAYADNNPNMRSVSYDQATGKTEPSSSTAGAGAVKPEKVDNPYGSTAGAGSGEFHVYRHARSREMARMAQLEY----EEKQQLLHEDFEKRKHEMETEEERKTAKRRKXRMRGKXXXXXXXNMKLGGVGLQEDGTGGENLEGGE-------EEFEYTPTHRQIENKGDNDDAEKIEFKNDGSFLEMMKKKLA 188
BLAST of mRNA_A-nodosum_M_contig995.18.1 vs. uniprot
Match: A0A7S2V2K9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2K9_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 8.340e-19 Identity = 55/110 (50.00%), Postives = 72/110 (65.45%), Query Frame = 2
Query: 518 MGRYTTVQAYSDNNPKLVHVSYDQAKGKDDG----DGKA-----GGKLVVEKTDQVMGSCAGAGSGEFHTYRAHRRTEIHRVAAMEESAKKEEAAAKLHEAMEKSRKECE 820
MGRYTTVQ Y+DNNPK+V VSY QA G+D DG A GK+ V K D VMGS AGAGSG+FH+YRA R EI R+ A+E A++++ + +++ R+ CE
Sbjct: 1 MGRYTTVQTYTDNNPKVVQVSYAQAVGQDKATRAQDGGAMVEQKSGKVKVPKVDNVMGSTAGAGSGDFHSYRATRMREIKRMEAIEAGARQDDLVEEFQHRLQQKRQSCE 110
BLAST of mRNA_A-nodosum_M_contig995.18.1 vs. uniprot
Match: A0A4D9D064_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D064_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 8.240e-15 Identity = 46/80 (57.50%), Postives = 55/80 (68.75%), Query Frame = 2
Query: 518 MGRYTTVQAYSDNNPKLVHVSYDQAKGKDDGDGKAGGKLVVEKTDQVMGSCAGAGSGEFHTYRAHRRTEIHRVAAMEESA 757
MGRYT+VQAY DNNPK+ V+YD G +D DG + +EK + V GS AGA S FH YRAHRRTE+ R+A MEE A
Sbjct: 1 MGRYTSVQAYGDNNPKIASVAYD---GGEDRDGNPQ-RSKIEKLENVTGSTAGASSSSFHIYRAHRRTEMARLAEMEEKA 76
BLAST of mRNA_A-nodosum_M_contig995.18.1 vs. uniprot
Match: A0A0P1A6J8_PLAHL (Uncharacterized conserved protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A6J8_PLAHL) HSP 1 Score: 79.3 bits (194), Expect = 1.310e-13 Identity = 68/190 (35.79%), Postives = 88/190 (46.32%), Query Frame = 2
Query: 518 MGRYTTVQAYSDNNPKLVHVSYD-QAKGKDDGDGKA---GGKLVVEKTDQVMGSCAGAGSGEFHTYRAHRRTEIHRVAAMEESAKKEEAAAKLHEAMEKSRKECEXXXXXXXXXXXXXXXXXXEGPAKQARTEGAPKDSSSGSAGSGGSASDSGATEEFVYIPLKDQAALGGDGGAPAAFKNDGSFLERM 1075
MG YTT+Q +SD + + V+YD + KD D + GGKLVV + D V GS AGAGSGEFHTYRA RR E+ R+A+ME+ K +A + + K +++ E XXX AK + E V L + L GG P NDGSFLE M
Sbjct: 1 MGCYTTLQTFSDQDAQGAAVAYDADSNAKDSSDAASNVKGGKLVVNRVDNVSGSSAGAGSGEFHTYRAARRREMDRIASMEQQYKDNKAQQEFED---KRKRKAEIFEAKMQKRTEKRRXXXERAKAKTSEIE------------------------SVVNTVLSKEKMLETPGGVPE-IPNDGSFLETM 162
BLAST of mRNA_A-nodosum_M_contig995.18.1 vs. uniprot
Match: A0A7S2HD40_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HD40_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 8.660e-13 Identity = 49/111 (44.14%), Postives = 62/111 (55.86%), Query Frame = 2
Query: 518 MGRYTTVQAYSDNNPKLVHVSYDQAKGKDDGD----------GKAGGKLVVEKTDQVMGSCAGAGSGEFHTYRAHRRTEIHRVAAMEESAKKEEAAAKLHEAMEKSRKECE 820
MGRYTTVQAY+DNNP + VSYDQA G+ G G + EK D GS AGAGSGEFH YR R E+ R+A +E + K + L E +K +++ E
Sbjct: 1 MGRYTTVQAYADNNPSMRSVSYDQATGRSSSGVAAAASSSATGPGSGSVKPEKVDNPYGSTAGAGSGEFHVYRHARSREMARMAQLEHAEKNQ----LLEEEFQKKKRDLE 107
BLAST of mRNA_A-nodosum_M_contig995.18.1 vs. uniprot
Match: A0A225X3R8_9STRA (RNA-binding protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X3R8_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 3.470e-12 Identity = 46/91 (50.55%), Postives = 57/91 (62.64%), Query Frame = 2
Query: 518 MGRYTTVQAYSDNNPKLVHVSYDQAKGKDDGDGKAGG------KLVVEKTDQVMGSCAGAGSGEFHTYRAHRRTEIHRVAAMEESAKKEEA 772
MGRYT+VQ +SD + + V+YD A KD+ A G K V + D V GS AGAGSG+FHTYRA RR E+ RVAAME+ K +A
Sbjct: 1 MGRYTSVQTFSDQDAQGAAVTYDAAS-KDESSAAASGADAKDGKFHVNRVDNVSGSSAGAGSGDFHTYRASRRREMERVAAMEQRYKDNKA 90
BLAST of mRNA_A-nodosum_M_contig995.18.1 vs. uniprot
Match: A0A484DQI6_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DQI6_BRELC) HSP 1 Score: 74.7 bits (182), Expect = 5.050e-12 Identity = 42/81 (51.85%), Postives = 52/81 (64.20%), Query Frame = 2
Query: 518 MGRYTTVQAYSDNNPKLVHVSYDQAKGKDDGDGKAG----GKLVVEKTDQVMGSCAGAGSGEFHTYRAHRRTEIHRVAAME 748
MGRYTTVQ +SD + ++ V+YD + + G GKL V + D V GS AGAGSGEFH+YRA RR E+ RVA ME
Sbjct: 1 MGRYTTVQTFSDQDAQVATVAYDATVKEKEPSGTTSEIKDGKLHVNRVDNVSGSSAGAGSGEFHSYRAARRREMERVAVME 81
BLAST of mRNA_A-nodosum_M_contig995.18.1 vs. uniprot
Match: G4YMD8_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YMD8_PHYSP) HSP 1 Score: 73.2 bits (178), Expect = 2.690e-11 Identity = 45/91 (49.45%), Postives = 57/91 (62.64%), Query Frame = 2
Query: 518 MGRYTTVQAYSDNNPKLVHVSYDQAK----GKDDG--DGKAGGKLVVEKTDQVMGSCAGAGSGEFHTYRAHRRTEIHRVAAMEESAKKEEA 772
MGRYTTVQ +SD + K V+Y+ A DG + K KL + + D V GS AGAGSG+FHTYRA RR E+ RV AME+ K+ +A
Sbjct: 1 MGRYTTVQTFSDQDAKGAAVAYNAASEPAAAPADGANESKDSSKLHINRVDNVSGSSAGAGSGDFHTYRAARRREMERVEAMEQRYKENKA 91
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 2880.D8LC75 |
| Preferred name | PRKRIP1 |
| PFAMs | DUF1168 |
| Model size | 1562 |
| Max annot lvl | 2759|Eukaryota |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0001932,GO:0001933,GO:0003008,GO:0003014,GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0004857,GO:0004860,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006469,GO:0008150,GO:0009892,GO:0010563,GO:0010605,GO:0019207,GO:0019210,GO:0019220,GO:0019222,GO:0019887,GO:0019899,GO:0019900,GO:0019901,GO:0030234,GO:0031323,GO:0031324,GO:0031399,GO:0031400,GO:0031974,GO:0031981,GO:0032268,GO:0032269,GO:0032501,GO:0033673,GO:0042325,GO:0042326,GO:0043086,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043549,GO:0044092,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045859,GO:0045936,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051172,GO:0051174,GO:0051246,GO:0051248,GO:0051338,GO:0051348,GO:0060255,GO:0065007,GO:0065009,GO:0070013,GO:0080090,GO:0097159,GO:0098772,GO:1901363 |
| Exons | 5 |
| Evalue | 2.11e-58 |
| EggNOG OGs | KOG4055@1|root,KOG4055@2759|Eukaryota |
| Ec32 ortholog description | Protein of unknown function DUF1168 |
| Ec32 ortholog | Ec-20_004720.1 |
| Description | protein kinase inhibitor activity |
| Cds size | 624 |
| COG category | S |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680870537.0018668-UTR-A-nodosum_M_contig995:74200..74666 | 1680870537.0018668-UTR-A-nodosum_M_contig995:74200..74666 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig995 74201..74666 + |
| 1680870537.0177314-UTR-A-nodosum_M_contig995:78776..78827 | 1680870537.0177314-UTR-A-nodosum_M_contig995:78776..78827 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig995 78777..78827 + |
| 1680870537.073835-UTR-A-nodosum_M_contig995:84215..84636 | 1680870537.073835-UTR-A-nodosum_M_contig995:84215..84636 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig995 84216..84636 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680870537.028837-CDS-A-nodosum_M_contig995:78827..78855 | 1680870537.028837-CDS-A-nodosum_M_contig995:78827..78855 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig995 78828..78855 + |
| 1680870537.0389564-CDS-A-nodosum_M_contig995:83010..83146 | 1680870537.0389564-CDS-A-nodosum_M_contig995:83010..83146 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig995 83011..83146 + |
| 1680870537.050004-CDS-A-nodosum_M_contig995:83541..83662 | 1680870537.050004-CDS-A-nodosum_M_contig995:83541..83662 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig995 83542..83662 + |
| 1680870537.0603347-CDS-A-nodosum_M_contig995:83876..84215 | 1680870537.0603347-CDS-A-nodosum_M_contig995:83876..84215 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig995 83877..84215 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig995.18.1 >prot_A-nodosum_M_contig995.18.1 ID=prot_A-nodosum_M_contig995.18.1|Name=mRNA_A-nodosum_M_contig995.18.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=208bp
MGRYTTVQAYSDNNPKLVHVSYDQAKGKDDGDGKAGGKLVVEKTDQVMGS CAGAGSGEFHTYRAHRRTEIHRVAAMEESAKKEEAAAKLHEAMEKSRKEC EERTRKKAEKRKRKKQAKREGPAKQARTEGAPKDSSSGSAGSGGSASDSG ATEEFVYIPLKDQAALGGDGGAPAAFKNDGSFLERMKKELAGRDLDSSGG SKAVAAS* back to topmRNA from alignment at A-nodosum_M_contig995:74201..84636+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig995.18.1 ID=mRNA_A-nodosum_M_contig995.18.1|Name=mRNA_A-nodosum_M_contig995.18.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=10436bp|location=Sequence derived from alignment at A-nodosum_M_contig995:74201..84636+ (Ascophyllum nodosum dioecious) ACTGGGCCAGGGGGTACTCTCGTCAAACACAACTAAGGATCTACCAAAAC
ACGCATCGTAGATCGACTACTGAAACTGCCATGAATCCTATTGGTCAGGC
TTTCCCGGTAATCAATATGCATTTAGTAGTTACTTCGATTACTTCGATCA
ATAGTACGTAACACCTCAAGAGATATATTACTTTATCCGGAGAAATTTGC
CACGAGATACTTTTTGATTGCCCCCGTGGTCTCAAAAAATAATACCAGGA
ACAGTGTATCATGAATAAGATTTCAGCGATTGAAGTCGACCTCGGATCCC
CAACCGGCACAAGCACGATTACCTATTTGCCAACCTCTTGGGGGTGAGGG
CAAGGGCAAGGCATGTAAACTCTGTCATTACGATGTGTGTCAAAACCGAA
ACTGTTTGAATTCGATCCATCTCAAAATCGATCAAACCTGACTTATCGTT
TGGGAAAGGGACCAAGGTAAGGATCGCAAGACTATTAATAGGAAGGGCTG
GGCGAAAATTCACAATTCGGAAAAAAATAGCGATTTGCTCTCTGGTGTTC
TTTCATCCCTCGATGAACACCTTAAAAACACGTACGGGGTTTTCGTGGGA
GAGGCACTCACACTCCAGGCGTTCGACAAGCAAGCACATAGCAGACCACG
ACCTTAGTGAACGGATCAATCTGTACCTCAAGGGCCTGCTTAGCTTATAT
TAGCATACATTCAAGAACCGCAAGCAGTGTCAGAGCGTGGGGAGGCTTGT
GCCGGAAAAGGGATCGTGGGCGGGGACCTGGTCGAATGGAGGAGAGGTGA
TACGAAGGTTTCCAGCTTAAGCATATTGGTATTTCCGGCATGTTTGTACC
GCGAGCTGTACATGCTCCACCGGTTAAGCCTGGTCGTCGGATATTTTCTT
GGAGGTGATTCTGCCGTTTCATGCAATCTCGAGGTCAGGCACAAGTACTT
GTACGTAGTAGGTGGTATCGTATTGTTGTTTTCTTCAAATTACTCTATAC
CAGTACGGGGTAAAGAAGGTAAATTAGTATAAGTCTACCGTATAATGTAG
AGCCTTAAAAAATAGGGAGAAATAGACAAGTCTGTGCACTAATCGCCCCA
AGTATATCACAAAGTCTTAAAAACTTTAGATGCTGATATTACGTCGTCGG
CGAATCTTCAGAGGCAAAATGGTAATAATAAGATAGGTGAAGCTATTAAT
CCACGGATACAGTAATATCGATGACACTTATTATCGTATACTAATATTAC
TACGGTACTATATTGTATTGTATTGTACTATAGTCTACACTATTGAATTA
TGTACAACAATGAAACCCATGTACTGGTACTATTACAGAGTATATCAGAA
TACTCTAGTCATTTAGATACATCAAAGGATAGGGGCCCAAATCGTGGCTA
TACTTTATTTACGTAAGACAAGACAAGACAGTGATCCCACCTAAACGTAA
CGTTTTGATTTTTTTCCCCTCCTGACTGGGGGATACTCAGAAGGTCGAGG
CGCGTTCTGATTTTTCTTTAAAAAATATAATATTCTAGATTATTACATCT
CGGTGACGTGAGAGGTTTGTAAACGATATATATATATAGAGCTCTAGAGG
TATAAATATTTGCAGTCATTGGGGGGGCAACCGCCGGTACTTTCAGCATG
CCCACTTCATACCATTAGTGGATGAGGGAAAGAGAGGCACATATTAATTG
GTCCATGGTGACCTGCCAAGGCAGCACCCGTTTGGAACTATCTTGAGGTT
TACTGGCCCTGTGGCAGCAGACTCTCGGCAGTGAACACCATCCGTACGCA
ACCTCGACCCGATAAACTCGGGACTGACCCGATGGTGTATGGCGGTTTAG
ATAAATAAATGGGCGCCGCCGCGGAATTCGGGAGGAATCCGTAAGTAAGC
ACCAGATTCAGCCTGAGCATGGGATGAGCAAGCTGATGCGGGACGGGACT
GCCGAACTCATCACGGACACCAAATTATCAGGCGCGAACGGGGACAGGAT
TTTTTTTCCCCTGTTCAGCTGACCACGAGCAGGATTGGCAACCTTACCTG
GTTGATCTCCCTCTTGCTATGATATGTGATGATCCATACATACATAGTTT
GACAAATAATAGTAAGTTTAGAGAAAGTAAACAAGTGCGGGCACGTGATT
GTTAACGTTATAGACATCCGGGGGAAATATGAGAAATTGTTTCATTTAAT
AAAGTTATGTCTCAAGAGAACGGTAGCTCTAGGCTCTAAGTAAGAAGAGC
GCTCGGAGAATTTTGGCAAACCAGCAATGGCGCGGGACGGGACGGCCGAA
CCCGTCTCGCGAGACTTAATTCTCAGGCGCGAACTGAGGACAGGAAAAAT
AATTTTCCTCTTGAGTTGGCCACGGGCAGGATTGGCAACCACACTCGGTT
GATCCATACACACTCGGCTGAATGTGCTGGCCATACATAACACGTTCATT
CTCCAAACTCGAACTGAACCTGGCGCTTCCCAAAGGCTCCTTTACTTTCT
CCCGCTTGCCGCGACGATGACCATATTTATACCGTCAACCGTCATCAGGT
CAGTCCCGAGTTTATTGGGCCATTCAACTTCAAACAGGGTACCGATGACG
TTTACCACCCCGAGTCCACCGGCACAAGGCCAGTAGACCTCAAGGTAGCT
CAAGTAACGGGTGCTACCTATTGTTCAGGTAACCTCATGGATACCGCTTG
TGCTTTCAACATGCCCACTTCATACCAATTGTGGGTGTTGGAAAATAGAG
GCGTATATTAATTGGTCCATGGTGACCTGCCTAGGCAGCACCCGTTTGGA
ACCACCTTGAGGTTTACTGGCCCTGTGCCGGCAGACTCTCGGCATTGAAC
GCCATCGGTACGCAATTGCGTGACTCGATAAACTCGGGACTGACCCGATG
GCGTATGGTGGTTTTAATTTTAAATAGACGCCGCCGCGGAACTCGGGAGG
AATCCCGTAAGTAAATAAAGCACCATATTCATCCTGAGTATTATGGAGAT
GAGCAGGCTGACGCGGGACGGGACTGCCTAACGCGTCTCGCGAGACCAAA
TTCTCAGGCGCGAACGGGGACAGGGAAATATTCATTTTCCTTATTCAGCT
GACCATGAGGAGGATTGACAACCTTACCCGGAGTTGATCCATACTCTTGC
TATATGTGATGATGAGCATACATGGACATAATTTTGTGCGCCGCTCTTTT
CCTAAAGAGTACCAGTATTATATTAATAACTGGGCACGTGGTGAAAGAAT
GTTTCGGTTTCGGATACATTATCGGGATGCTTGAGTCCTGCCCAAAACAC
AATACAGAGTCAAGTGGTGGAAAACGGGGTGAACTAATGAAGCTGGTCAT
AACTCCGCCATTTTGGAAAGTTGGATCGTGTGCAGCGGCTTGATCGAGAG
GTCTTGCTCATGGCGCCCCGCCGATATCTTGTGGGGAGCTCCATCGGTTC
GTTCTATAGCGAGCAACAGCAGTGAAAGATGATATGGGCCTGAAGGAGCC
GATTGCTGCAAATTACGACCCGAGAGCTGTTCAGATTGTAGTTGAAAATC
CGAGAAAAATCTAAATCTTCACAATTTTGGATTGACGAATTGGAGAAAAT
TAACAAAAACATGCAGTATTTGTGACGCTATTGGTAAGGACCCCATTGGT
AAGAGCTTTCGTTTGAATACCACCGTCGTGTAGGAGAGTCCGCCTTAGCA
AGGGGCACAACCATTCGCATACTGTGTAGATTTTGATGAAAATACAGACA
GACGCGTACTCTCGAAGAAGAGTTTGAAATTCTCCTTTGCCACCTCTGAG
TTGGGTAGTGAACCTACACGGTAGCGTTGTCGAGCAGCAAACGAACATCA
CGGCAAATGCATTAGACTGTTGTGTGTAGTCACTTGAGCTGGCGTTGGCA
AATCTGTGAGGATAATTATTTGTAGAGCCGGCACCACAAAATCCGCGCTC
CCAAAATTCTAACACAGAAATCATGAATTTCTGGGACCACGCTTCACTGC
TCCCACCACAAAAAGTTTGCCAGCAATCTGGATTACCGCGACAGCAAGAC
ATACGGAGTACTCCAGAGCAGCTCACTATTAATTGATACTTCAAAACTTT
AAAATGTGGCGCAAGTACTTGTATAATCAAGAAGCCTTTGACGAAGTGAG
AATTTTACGTCGGCTGTACGGTACTATTAATACTGTAAACAGAAGTGAAG
TACTCGTGATACGATGTACGAGTATCTTGTAACATGATATGTAAACTCCG
TGATTGAGGAATGGAAAATGCCAGGACAGCGCAGCACAGCAGTACAAGTA
AGACTCGTAATACTCCGTATGAAGGTATGCTTGATGACCCCAGGGTGCTC
TATCTCCAATAGATAGTTTTGCAAGCACAGTTCTTCTAGATCAGCGGGGA
CAAAATCGTAATAGCCCCGGTATTCTCCGTTCGTTCGTGGGGGGAAAACA
ATGAAAAAACAGAAGCGGAAAACATACATAACGTGCTGAAGGAGTTTGTA
GCGGTGACGCGTTTCGCATCACACCTCTAGCCTCCGTTATCCCCGCTACT
ACCCTCACTTGTTCGCGTAACTCGAGGCCTTGAACTGGCGAAGGCATTTG
GTGAACTAAAGGCGCTTGGATCGAAAGATGGGGCGCTACACGACCGTACA
AGCATGTGAGTAGTTTATAACGTCGTCAGGAATGGCCAGCTCGCGGTTTC
TGCCGCCGTCCATCATTTGCTGACACGCGCTTCATAGTAACGTCGTCTCC
GCCAAACTCAAACTTGGTTCTCGCAAACCCAGGCAACTCTTTCCTCCTTA
AGCACGGCATACTTTGCAGCACCCGATCAGCATCGTAAAGAGTGTGAAGT
GTCATCGAGTATCATCAGGCCGTGTCTCTGGTGTTTTCGGGCGAGTCATG
TCATTTTTACGCGGGACCTTTGACTAAAACAATAGTAGTATCTGTACCTT
CGACGCAGCACGTACAGGCAGACTTTGGCGCTACAACTTAGGCGCTACAA
CTTAGGCGCTACAAGCGTCGATTTAACTTCATCTACAGGTGCATCCAGCG
ACGACCTTAGCCACGTTACAGCCATGGAGACTCACCGCTCCATGATTTTA
AATCGTATTGTCGGCCAATTTTGCAAGCGCCGTTGAGGGTCGCCCTTATT
CGATCTTGAACATACTGAGCCAAACAGCACCACTTTCTCCCCTCAGCAGC
TTCGTATTTATTTTACCCACGTGCCGGTCATCACCCGATAGAAATACCCC
AAATGGTAGTAACTTTCACCCTTCAGTTCAACTTACATTTTCAGAAAGCA
AGCCTTGTGTCCACGTCAAGTTATCCACCACCATGGTATCAGTACTCGTA
GCGTAACATATTTACAGTAGTCTACTTAACATAATGGCGGTACTTCTGCC
GCAATTTTTTGGTGGGGCTCGTAATGTAGACGATAGAAGAGCCGAGGTGG
CGCCATCCGTGCGTTCAGCGTTTGGCGTTTGGCGTTTGGCGTCTACATTT
GATTGCATCTGTAGCATGCTGCAGCTCTGCATAAAAAATACCAACTTGCT
TTACCACGTACTACTGCTGTTTTTTTATTCCCATTTTATTACGAACGTCG
CACGCGCTGCCAATCTCTCGATAGTAATCGTACATTTGTTCTCTATGGTA
TACAGCAGTGGTACGTACAGACAGCACTCGTTTATTGTTTTTTTGCGCAC
GATCTAAATCCTAGCCCCGCAGCAGCAGATGGCATCGTGGAGCTGCGCCA
CTCGCCGCCGTAATTTTTCACATTAAAGCTGTATTCTAGTTTTTCGAACG
TCCAATGTGGTATCAGAAAAATCTTTCCCATCCCCCACCCAATTCTTCTC
CCAACCCCCACCCAATTCTTCTTAGGTACTGTATGTTGTTTAAAGAAAAA
TCTGAATGCACCTAGACCTTCTGGTTTGTACATTCAGCGTATTGGTTGCC
AACCCGAAAAACACTTTTTTACACGGTGGCCAATCCCGCTCGTGGTCTGC
TGAATAGGGAAAAGAGAACAAAATAAAAAGTCTGGCAGCAATGGACTAGT
CTAATTGATGATGGAACTACTGTACTACAGTATGCAAGTTGCGTTCAGTC
TTGTAAGGCCGACTACTTTAGTGGGACACGAAACGCGAAACGGATTTCGC
CGTTTTTTTTTTTTTTTTAAATGCCTATAGTCTATCTTATGGAAGCGGAT
TTTCCGGAAATCCGCGAGAAAAATTCCGCGAGAGTGTTTTGATGAGTGCA
ACTTGACAGAAATCGTTCAACGAAAACATTCGCGAATTTTACTGCGATGA
GAGACATCGAGGCGTACCTCCTTCTTTCTTCCGTGAGCTATACTGTATAG
CTATACAGTATAGTATAGCTATCATACGTGGGAGACGGCGCTCCTAAAGT
CAAGCGCACCCGCCGTGTGTTCCCCCGGCCAGACTACATGCTGTCGACGT
GGATGACCATGCTTCGCCAACCACGTCTGGTCCACCACAGATCGACAGTT
TGTCCATCCCGTAAAGTCAGCTCTCGAGAAAAGTGTTGCAACTGCAGCTG
GTTCGAATGTTCGAATTGCACGGAGCGGATTTGTCTGTAGGCACAGGAAT
TAAAAAATTGGTACTCTTTGTACGTGTACAGCAGCAGGACGGGGTCTTCT
TCCTGACTTTGCTATTTTGTTTTGCGTGTCGAGTATGTCCCTACAGGCCT
GCTCCCGCCGCTGTTTACTTGTGTATCCAGTATACAATATACAGTACAGT
ATACATCAATAGAGTTGCCGCCACCTGGTAGAGGGGATGTTATACAGCGC
GAGCGCACGAAGTGACCACAGCGTGGATCAAAGGGAAGTTATATGTTCCA
TGATTATCCCACAATAAATAGCAGCAAGCTCTTCACCAGTCGGAGAACGC
CTACGGAAAAAATCCGTTTGCCATGAGATTGGGTCGAGTAAGTGATTCTG
GGCCCTTTCACAACAAACGGATTCAGGAAAATCCCTTTCGCGTTTCGTGT
CCCGTAAGAGCCTTAAGGGCCGTTCTCATCTCCAGACCGAACCCGTCTCG
CGAAGTAAGAGGCCCCCTGAACCTTATAAAGGTAAAGGTGTTTTATACAA
AATGAAAGTATTAAACGTAAAGTAGGAAAATCAGGCAAATAATAAATTAT
GGGAACACGAGAAAAGAAAAAATTTAAAGGTAATAATCTTAAACCAAGAT
TTTATCTATTCATCGTTCAAATAAACATATTTATGCTCAAAAAATTACTA
AACTACTTTTAAAAATAACGTTTCACTATCTTTTCAAAAAATTTGAACCT
TCTAGAGGTGAACTTGATTGAGCAAATTTATTAGGTACCATTTGACCTGC
TAAATAAGCTTGTCTTCCTGCTTGAACAGCCAGATTCATAGTTGTTGCCA
TTTCTATAGAAACAGGGAAAACCCCATATTCCCCGTCAGCTCACCGATTC
ACACCATGATAAGATCATGATCACGATTAGACTGGGATTGGTACAAATAA
CCTTACAACCTTACTCGGTTGATCCATACTCTCTGCTATGTGTGATGCCC
GTATATATATGCATACCTGATACGGAATGAACGTGGGCAGTTTATTTTGT
TGCGGTCGGTGGAATTGGTCACCCATGTACCCATGTTGCTGGTACTCATA
CTGTACCCAACAATACCAGTTCTTCCTTGGGAAACCCTTGGCTGAACTGG
TAATATTAATATAAAGCTGTCGAACGCGAGACTCCAAGCCTTTTGACGCG
TCCTTTACTAGCGCAGTGCATTATGTATACACTACGTTCAGCCCTTGAAC
TAACTAACATTGCGGGACAGGCTACTCCCCGCTGTGCCTTGAACCGAGCA
CAGGCATAGGTCTAAGGCTACGCACTTTCAGAGCCTCCAGCCGACTTTGT
AAAGGTTGGAGATCTTCTCCCGAACAAGGTTTACTGTGTTTACTCGGCAA
GTAGCTTAGCGGTGTAATTATCCATTCGACAAAAAGCTATACCTGGGTTC
GATCCCGAATGGCTCCGTGGTTTAAACATACTTGACAAAGTTGCCCTAGA
ATATGTTCTCCGGAATAATTTCAGTTTTTGACTGAAATGCCTATGGCCTC
AAGCCAAGCGTGTTTGTGTTTACGTACTAATAGTTTATAATTTGAGTGCG
GCGTCAACCAACGGGACCACTATATTTTCACAGAGTTTTTAGGCGGGGTC
TCGAGAGAACAAGATCCCGCAGGGTTTTTATAATATTTTAGACCTTTCGC
GCTCTCACACTAGAGCTATATAAATACATTATTATAGAGCTATATAGTTA
GCCGTCAACCAACGGGACCACTATATTTTCACAGAGTTTTTAGGCGGGGT
CTCGAGAGAACAAGATCCCGCAGGGTTTTTATAATATTTTAGACCTTTCG
CGCTCTCACACTAGAGCTATATAAATACATTATTATAGAGCTATATAGTT
AGCTCCTGGCTACCCAAGCTCCTTTCTAGAACTACGGATAGAAATATAAA
AATGTCAAGAGTAGGATTTGACGTCCGTGTAGCTGGATGGGTTGCTCTGT
CGCTCATTCGTCCTTAGTTGAATATTTCCCACACAACCCCAATTTTTCGC
ACGAGGTCGTCGGGTTTTGGATAGTATATAGGGAAAAAACTTTTCAACCA
ACTTTGTTAAATTTGTGCTTTGGTTCGATTCATCAGACCTTCATGCGCAC
TTTCTCGAGTTGTGGTTGACGAAAACAGCTACGAAGGTCATATGCTTGGT
TTTTGCTCAAAATACTCGAGTCCAATCTCCCATCCGTTGGCCCTCCTCCC
AAAACTACAGATAGCGATAACAACCCGAAGCTGGTGCACGTGAGCTATGA
TCAAGCGAAGGGCAAAGATGACGGAGACGGAAAGGCGGGCGGCAAGCTCG
TCGTCGAAAAGACGGATCAGGTTATGGGCAGTTGCGCCGGAGCTGGGTGA
GTGCGGTAGTCCAGGGAACGCGTCAGAAGGACTTGGCGTCGTGTGTAGGC
ACGGTTCGATTGAGTGGCCTTGTTTTTGCCTGATAGGGTCGCCGTAATCG
TTGTTCAAGAGGAGCTATATCATCGTTTGAGATAGGTGATGGTGGACCTT
GGCAGTCCTCGAGTACAAGCAGCAATGTTACAGTGATGTAGGAGTAAAAG
ATACGCGAGAGGACCTTGTTTTACAAGAGAGGAGTTCAAGACCTGCATAG
TTAGTTCCAGCGTCTTCTCGGAGGTGCGCACCCCGTCGATTCCGGCTGCA
TCTGAAACAAAGCCTTCTCGCGGCGACTTATTTCGTCGTGAACGGTGCCG
CCATTGCACTGCACCGTTTCCTTTTTTTTTCACCGTACAAGATCCGGCGA
GTTTCACACGTACCGCGCGCACCGACGGACTGAGATTCATCGCGTGGCAG
CTATGGAGGAATCAGCGAAAAAAGAAGAGGCTGCCGCCAAACTGCACGAG
GCCATGGAAAAGGTATGGCCAACTACCCCCCCCCCGAGGCAGGTAGTTAC
CGCGGCGCGCCCTTATCAGGTTCGAAATGTTAAGTGTATCAGTTTTCGTA
ACGCGCTAATTCCTGTCAAGGCGGGAGCTTTTACACCTCCTAACTACCTC
CACAAGACTAGGCATTTATCCTCGACCTTTGACGCTCTGACTGCCTGACT
GCGTCGACTCGGTCGTGTGTTGACAGAGCCGGAAGGAGTGCGAGGAACGA
ACACGGAAGAAGGCGGAAAAGCGCAAGCGCAAAAAGCAGGCCAAGCGTGA
GGGCCCTGCAAAGCAAGCCAGAACGGAAGGCGCCCCTAAGGACTCGTCCT
CGGGTTCCGCGGGCAGCGGTGGAAGCGCCAGCGACAGCGGTGCTACAGAG
GAATTTGTGTATATCCCGTTGAAGGACCAGGCGGCGTTGGGAGGGGACGG
GGGTGCCCCCGCGGCGTTCAAAAACGACGGAAGTTTCCTAGAAAGAATGA
AGAAAGAGCTGGCGGGGAGGGATTTGGACTCGAGTGGCGGTAGCAAAGCG
GTGGCCGCTTCATGAGTTGGCGAGTTTGGAAGGCGCTATGCAAGTTTCGC
TGTTTCGCTACTTGCTCAAAGGTTGGTTTAAATGGAATTGTGTTTCTTGG
GTGGCTCGAGCAAGCACGTGCCAGAGTGTTACTGCCATCACAAATCAAGT
GCGTTGGACAGATGGAACGGCAGAGTGTGGAAACAAACGAGGCTAGATAC
TCTGTCTGGGCCTCGAGTTCTAAACACTCAAGATGCTTTCTTGAATTTCT
TTTCAGCTTGAATCCCGTATCAAGCACTACGGATGTTGCGTCTCACGCAA
TGGACTATTAATAGTGGATCGAGTTAAACGAGGGGGCGTTGCGTTGGAAA
GGCTCGATGCCTGTAAACAGTTCCCAAGAGGTCTTGAGTTGGATCAGTTG
AAAACGCTTTCTGGGAATCTTGACGTCTTAGCAACA back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig995:74201..84636+ >mRNA_A-nodosum_M_contig995.18.1 ID=mRNA_A-nodosum_M_contig995.18.1|Name=mRNA_A-nodosum_M_contig995.18.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=624bp|location=Sequence derived from alignment at A-nodosum_M_contig995:74201..84636+ (Ascophyllum nodosum dioecious) ATGGGGCGCTACACGACCGTACAAGCATATAGCGATAACAACCCGAAGCT GGTGCACGTGAGCTATGATCAAGCGAAGGGCAAAGATGACGGAGACGGAA AGGCGGGCGGCAAGCTCGTCGTCGAAAAGACGGATCAGGTTATGGGCAGT TGCGCCGGAGCTGGATCCGGCGAGTTTCACACGTACCGCGCGCACCGACG GACTGAGATTCATCGCGTGGCAGCTATGGAGGAATCAGCGAAAAAAGAAG AGGCTGCCGCCAAACTGCACGAGGCCATGGAAAAGAGCCGGAAGGAGTGC GAGGAACGAACACGGAAGAAGGCGGAAAAGCGCAAGCGCAAAAAGCAGGC CAAGCGTGAGGGCCCTGCAAAGCAAGCCAGAACGGAAGGCGCCCCTAAGG ACTCGTCCTCGGGTTCCGCGGGCAGCGGTGGAAGCGCCAGCGACAGCGGT GCTACAGAGGAATTTGTGTATATCCCGTTGAAGGACCAGGCGGCGTTGGG AGGGGACGGGGGTGCCCCCGCGGCGTTCAAAAACGACGGAAGTTTCCTAG AAAGAATGAAGAAAGAGCTGGCGGGGAGGGATTTGGACTCGAGTGGCGGT AGCAAAGCGGTGGCCGCTTCATGA back to top
|