mRNA_A-nodosum_M_contig992.10.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig992.10.1
Unique NamemRNA_A-nodosum_M_contig992.10.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig992.10.1 vs. uniprot
Match: D8LTH8_ECTSI (Inositol-1-monophosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTH8_ECTSI)

HSP 1 Score: 461 bits (1186), Expect = 6.660e-159
Identity = 222/273 (81.32%), Postives = 248/273 (90.84%), Query Frame = 1
Query:  217 NKCEKALLERLRLATDVALLAGAAMKLVINVKNKNVLHKGVTDLVTETDKANEKLIFDAVRKMFPEDKLIGEESSADVGTIPALTDAPTWIVDPVDGTTNFVHGFPMTCVSIGFGRGGKMEIGVVYDPCSDELFQAVRGFGSFVNGERTSTSGCSDLGSAIVITEYGYQRDPAAVKIMMEVTEKVLRQCRGIRQVGSGCLDLCWVGCGRVDAVYAGVAGEGWHPWDYAAGWLFIEEAGGVVIQVDGTPFHVQSASVLGAASKDLADTLVATIR 1035
            +KCE ALLERL+LAT+VAL AGAAMKLVIN K + ++HKG TDLVT TDKANEKLIFDAVRK FP D LIGEESSAD G+I ALTD PTWIVDPVDGTTNFVHGFPMTCVSIGFGRG KME+GVVYDPC+DEL+QAVRGFG+FVNG + S+S C++LG+A+VITEYGYQRDP AV+ MMEVTEKVLR+CRG+RQVGSGCLDLCWVGCGRVDA+Y+GVAGEGW PWDYAAGWLFIEEAGGVV QVDG+PFHV S SVL AAS++LAD LV+TIR
Sbjct:   54 SKCESALLERLKLATEVALQAGAAMKLVINTKKEGIVHKGATDLVTATDKANEKLIFDAVRKSFPGDVLIGEESSADAGSIAALTDEPTWIVDPVDGTTNFVHGFPMTCVSIGFGRGSKMEVGVVYDPCADELYQAVRGFGAFVNGRKASSSDCTELGNAVVITEYGYQRDPVAVRKMMEVTEKVLRKCRGLRQVGSGCLDLCWVGCGRVDALYSGVAGEGWQPWDYAAGWLFIEEAGGVVKQVDGSPFHVFSKSVLSAASRELADELVSTIR 326          
BLAST of mRNA_A-nodosum_M_contig992.10.1 vs. uniprot
Match: A0A835YVI1_9STRA (Inositol-1-monophosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVI1_9STRA)

HSP 1 Score: 329 bits (843), Expect = 2.830e-107
Identity = 164/285 (57.54%), Postives = 211/285 (74.04%), Query Frame = 1
Query:  181 HPRTPPALKYCRNKCEKALLERLRLATDVALLAGAAMKLVINVKNKNVLHKGVTDLVTETDKANEKLIFDAVRKMFPEDKLIGEESSADVGTIPALTDAPTWIVDPVDGTTNFVHGFPMTCVSIGFGRGGKMEIGVVYDPCSDELFQAVRGFGSFVNGERTSTSGCSDLGSAIVITEYGYQRDPAAVKIMMEVTEKVLRQCRGIRQVGSGCLDLCWVGCGRVDAVYAGVAGEGWHPWDYAAGWLFIEEAGGVVIQVDGTPFHVQSASVLGAASKDLADTLVATIR 1035
            H + P AL       E  L ER+  AT++AL AG A+KLVI+ + K++ +KG  DLVT TDKANE+LIF  +R+ FP D+ IGEESSA  G I ALT APTWIVDPVDGTTNFVHGFPMTCVSIGF RGG++++GV+Y+PCS E++QA+RG G+++NG+R   SG + L  ++VITEYG QR+ AA+  MM+ T  VLR+CR +RQVGSG LDL +V CGR DAVY+GVAGEGW PWDYAAG +  EEAG  ++ V+G PF +   SVL  A+++LA  +   +R
Sbjct:   18 HRKVPEALTQRLGGVEAGLAERMETATELALAAGEAIKLVID-QAKDIENKGANDLVTATDKANEELIFQGLRRAFPGDEFIGEESSAAAGEIAALTAAPTWIVDPVDGTTNFVHGFPMTCVSIGFARGGRVDLGVIYNPCSGEMYQAIRGHGAWLNGKRIRASGSTTLAGSLVITEYGCQREEAAMTRMMDCTRAVLRKCRNLRQVGSGALDLAFVACGRFDAVYSGVAGEGWKPWDYAAGLVMAEEAGATMLSVEGQPFDLFGDSVLCCATRELAMEIAEIVR 301          
BLAST of mRNA_A-nodosum_M_contig992.10.1 vs. uniprot
Match: W7TWA1_9STRA (Inositol-1-monophosphatase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWA1_9STRA)

HSP 1 Score: 246 bits (628), Expect = 1.170e-74
Identity = 130/267 (48.69%), Postives = 177/267 (66.29%), Query Frame = 1
Query:  247 LRLATDVALLAGAAMKLVI--NVKNKNVLHKGVTDLVTETDKANEKLIFDAVRKMFPEDKLIGEESSADVGTIPALTDAPTWIVDPVDGTTNFVHGFPMTCVSIGFGRGGKMEIGVVYDPCSDELFQAVRGFGSFVNGERTSTSGCS-DLGSAIVITEYGYQRDPAAVKIMMEVTEKVLR-QCRGIRQVGSGCLDLCWVGCGRVDAVYAGVAGEGWHPWDYAAGWLFIEEAGGVVIQVDGTPFHVQSASVLGAASKDLADTLVATIR 1035
            + +AT  AL AG  +K     +  +K V HKG  DLVTETDK NE+ I   +RK FP   +IGEE ++D G IP LT APTWI+DP+DGTTNFVHG P++CVSI       + +GV+YDP  DELF A RG GS++NG+   T+G + +L  A++I E+GY+R  A ++ +++V+E++LR   + +RQ GSG LDL +V  GRVD VY GVAG+GW PWDYAAG L   EAG  +  + G  F V  +S++ AA++ +A  LV   R
Sbjct:   60 IHIATQAALSAGVNLKACSEKDPTSKCVSHKGEIDLVTETDKENEREIVALLRKHFPSYLVIGEEEASDAGAIPPLTRAPTWIIDPIDGTTNFVHGCPLSCVSIALAVDKAVVVGVIYDPFKDELFLAARGRGSYLNGKPLQTAGGTHELHQAVIIQEFGYERSEAGIRKLLQVSERLLRGNVQALRQFGSGVLDLAYVAAGRVDGVYCGVAGDGWKPWDYAAGSLVATEAGATMSTLQGQEFDVFGSSMVCAANESIARKLVGAAR 326          
BLAST of mRNA_A-nodosum_M_contig992.10.1 vs. uniprot
Match: A0A7R9U8Z7_9STRA (Inositol-1-monophosphatase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8Z7_9STRA)

HSP 1 Score: 245 bits (625), Expect = 2.410e-74
Identity = 127/250 (50.80%), Postives = 165/250 (66.00%), Query Frame = 1
Query:  232 ALLERLRLATDVALLAGAAMKLVINVKNKNVLHKGVTDLVTETDKANEKLIFDAVRKMFPEDKLIGEESSADVGTIPALTDAPTWIVDPVDGTTNFVHGFPMTCVSIGFGRGGKMEIGVVYDPCSDELFQAVRGFGSFVNGERTSTSGCSDLGSAIVITEYGYQRDPAAVKIMMEVTEKVLRQCRGIRQVGSGCLDLCWVGCGRVDAVYAGVAGEG----WHPWDYAAGWLFIEEAGGVVIQVDGTPFHV 969
            AL E L  A ++A LAGA +   I+ + K +  KGV D+VTETDKANE+LIF+ +R+ FP D  IGEESS+   +   L    TWIVDP+DGTTNFV G P+TCVSIG   GG+  +GVV++PC DE++  VRG G+++NG+R   S  + L  A+VI EYGY+R+   + +M      +  + R +RQ GSGCLD+CWV  GR DAVYAGVA EG    W PWDY AG +  EEAG V  + DGT F +
Sbjct:   43 ALQEELEAAVELAELAGARLNAAIS-ETKRIASKGVADIVTETDKANEELIFEGLRRRFPADAFIGEESSSGGVSAANLGPNKTWIVDPIDGTTNFVAGLPLTCVSIGLCVGGRPVLGVVFNPCMDEMYIGVRGHGAYLNGQRLKVSDTTRLDEAVVIQEYGYEREDGILALMSTSAALLGNKVRALRQFGSGCLDICWVAAGRCDAVYAGVAHEGLCKGWMPWDYCAGVVIGEEAGAVFKKFDGTDFDI 291          
BLAST of mRNA_A-nodosum_M_contig992.10.1 vs. uniprot
Match: A0A7S1TRK1_9STRA (Inositol-1-monophosphatase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRK1_9STRA)

HSP 1 Score: 231 bits (590), Expect = 4.990e-70
Identity = 118/222 (53.15%), Postives = 145/222 (65.32%), Query Frame = 1
Query:  316 KNVLHKGVTDLVTETDKANEKLIFDAVRKMFPEDKLIGEESSADVGTIPALTDAPTWIVDPVDGTTNFVHGFPMTCVSIGFGRGGKMEIGVVYDPCSDELFQAVRGFGSFVNGERTSTSGCSDLGSAIVITEYGYQRDPAAVKIMMEVTEKVLRQCRGIRQVGSGCLDLCWVGCGRVDAVYAGVAGEG----WHPWDYAAGWLFIEEAGGVVIQVDGTPFHV 969
            K +  KGV DLVT TDKANE LIF  +R+ FP+   IGEESSA+ G + ALTD PTWIVDP+DGTTNFV G P+TCVSIG   GGK  +GVVY+PCSDEL+  ++G GS++NG R        L  A+VI EYGY+R+   + +M      +  + R +RQ GSG LD+C+V  GR DAVYAGVA  G    W PWDY AG +  EEAG V     G  F +
Sbjct:    3 KKITSKGVADLVTATDKANEDLIFKGLREAFPDHSFIGEESSAESGAVAALTDTPTWIVDPIDGTTNFVSGIPLTCVSIGLCVGGKPVLGVVYNPCSDELYVGLKGHGSYLNGVRLQVGDTDTLADAVVIQEYGYEREDGILALMSTSAALLGNKVRALRQFGSGALDICFVAAGRCDAVYAGVAHSGLCSAWWPWDYCAGIVIGEEAGCVFKNFAGEDFDL 224          
BLAST of mRNA_A-nodosum_M_contig992.10.1 vs. uniprot
Match: K8Z378_NANGC (Myo-inositol-1(Or 4)-monophosphatase n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z378_NANGC)

HSP 1 Score: 237 bits (605), Expect = 1.840e-69
Identity = 124/250 (49.60%), Postives = 167/250 (66.80%), Query Frame = 1
Query:  247 LRLATDVALLAGAAMKLVI--NVKNKNVLHKGVTDLVTETDKANEKLIFDAVRKMFPEDKLIGEESSADVGTIPALTDAPTWIVDPVDGTTNFVHGFPMTCVSIGFGRGGKMEIGVVYDPCSDELFQAVRGFGSFVNGERTSTSGCS-DLGSAIVITEYGYQRDPAAVKIMMEVTEKVLR-QCRGIRQVGSGCLDLCWVGCGRVDAVYAGVAGEGWHPWDYAAGWLFIEEAGGVVIQVDGTPFHVQSASV 984
            + +AT  AL AG  +K     +  +K V HKG  DLVTETDK NE+ I   +RK FP   +IGEE ++D G IP LT APTWI+DP+DGTTNFVHG P++CVSI       + +GV+YDP  DELF A RG GS++NG+   T+G + +L  A++I E+GY+R  A ++ +++V+E++LR   + +RQ GSG LDL +V  GRVD VY GVAG+GW PWDYAAG L   EAG  +  + G  F V  +S+
Sbjct:   60 IHIATQAALSAGVNLKACSEKDPTSKCVSHKGEIDLVTETDKENEREIVALLRKHFPSYLVIGEEEASDAGAIPPLTRAPTWIIDPIDGTTNFVHGCPLSCVSIALAVDKAVVVGVIYDPFKDELFLAARGRGSYLNGKPLQTAGGTHELHQAVIIQEFGYERSEAGIRKLLQVSERLLRGNVQALRQFGSGVLDLAYVAAGRVDGVYCGVAGDGWKPWDYAAGSLVATEAGATMSTLQGQEFDVFGSSM 309          
BLAST of mRNA_A-nodosum_M_contig992.10.1 vs. uniprot
Match: A0A6H5KD97_9PHAE (Inositol-1-monophosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KD97_9PHAE)

HSP 1 Score: 220 bits (560), Expect = 1.240e-64
Identity = 121/269 (44.98%), Postives = 172/269 (63.94%), Query Frame = 1
Query:  244 RLRLATDVALLAGAAM-----KLVINVKNKN---VLHKGVTDLVTETDKANEKLIFDAVRKMFPEDKLIGEESSADVGTIPA--LTDAPTWIVDPVDGTTNFVHGFPMTCVSIGFGRGGKMEIGVVYDPCSDELFQAVRGFGSFVNGERTSTSGCSDLGSAIVITEYGYQRDPAAVKIMMEVTEKVLRQCRGIRQVGSGCLDLCWVGCGRVDAVYAGVAGEGWHPWDYAAGWLFIEEAGGVVIQVDGTPFHVQSASVLGAASKDLADTL 1020
            R+ +AT +A  AG AM           K K+   V +KG  DLVTETD++NE LI   + + FPED  +GEE+SAD G  P+    +  TW+VDP+DGTTNFVHGFP+TCVSIG  +G ++ +GVV++P + EL+QA++G GSF+NG+R   S  S +  A+V+ EY   R+  +++ M++ T  +    R +RQ G G +DLC++  G VDAV+ GVAG  W PWD+AAG L   EAG  +   DG  F +   ++LGAA+ +LA +L
Sbjct:   45 RMLVATALAQEAGQAMLDAKAHCAQEGKGKDGGGVSYKGRHDLVTETDRSNEALIQRGLHEKFPEDHFLGEETSADRGGAPSELSNNVLTWVVDPIDGTTNFVHGFPVTCVSIGLAKGDEVVVGVVFNPFTQELYQAIKGGGSFLNGKRLEVSKTSAMEQAMVMAEYSSVREEESLRKMLDTTGAIAGAARAVRQTGCGAMDLCFLARGSVDAVFGGVAGV-WKPWDWAAGVLIATEAGAAISAGDGGDFGLMGDTMLGAATAELASSL 312          
BLAST of mRNA_A-nodosum_M_contig992.10.1 vs. uniprot
Match: A0A8J9RK04_9CHLO (Inositol monophosphatase 2 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RK04_9CHLO)

HSP 1 Score: 216 bits (550), Expect = 1.010e-63
Identity = 124/265 (46.79%), Postives = 158/265 (59.62%), Query Frame = 1
Query:  241 ERLRLATDVALLAGAAMKLVINVKNKNVLHKGVTDLVTETDKANEKLIFDAVRKMFPEDKLIGEESSADVGTIPALTDAPTWIVDPVDGTTNFVHGFPMTCVSIGFGRGGKMEIGVVYDPCSDELFQAVRGFGSFVNGERTSTSGCSDLGSAIVITEYGYQRDPAAVKIMMEVTEKVLRQCRGIRQVGSGCLDLCWVGCGRVDAVY-AGVAGEGWHPWDYAAGWLFIEEAGGVVIQVDGTPFHVQSASVLGAASKDLADTLVATI 1032
            E LR+A   A  AGA +K   + K K V HKG  DLVTETDK  E+++F +++  FPE K IGEE SA  G    LTDAPTW+VDPVDGTTNFVH FP  CV IG     ++ +GVVY+P  DEL+ AVRG G+++NGE    S C DLGSA++ITE G  RD   +  +      +++  R  R +GS  LD+C+V  GR +  Y  G  G    PWD AA  L +EEAGG V    G PF +    VL  ++  LA  + A I
Sbjct:    3 EYLRVALLAAKKAGAVIKENFH-KEKLVEHKGTVDLVTETDKNCEEIVFSSIQDAFPEHKFIGEEGSAAQGFTAELTDAPTWMVDPVDGTTNFVHRFPFVCVCIGLAIKKQVVVGVVYNPILDELYTAVRGKGAYLNGEPIHVSDCKDLGSALIITEIGVTRDDVTLGALFGRISALVKGARSARCMGSCALDMCFVASGRAEVSYEVGFGG----PWDVAAASLIVEEAGGHVADPAGGPFDIMGRRVLATSNAGLAQQVGAII 262          
BLAST of mRNA_A-nodosum_M_contig992.10.1 vs. uniprot
Match: I0Z0E2_COCSC (Inositol-1-monophosphatase n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z0E2_COCSC)

HSP 1 Score: 216 bits (549), Expect = 1.610e-63
Identity = 113/234 (48.29%), Postives = 147/234 (62.82%), Query Frame = 1
Query:  334 GVTDLVTETDKANEKLIFDAVRKMFPEDKLIGEESSADVGTIPALTDAPTWIVDPVDGTTNFVHGFPMTCVSIGFGRGGKMEIGVVYDPCSDELFQAVRGFGSFVNGERTSTSGCSDLGSAIVITEYGYQRDPAAVKIMMEVTEKVLRQCRGIRQVGSGCLDLCWVGCGRVDAVY-AGVAGEGWHPWDYAAGWLFIEEAGGVVIQVDGTPFHVQSASVLGAASKDLADTLVATI 1032
            G+ DLVTETDK  E++IF ++R  FP+ K IGEE SA  G    LTD PTW+VDPVDGTTNFVH FP  CV IG     K+ +GVVY+P  DEL+ A+RG G+F+NG+  + SGC+DLGSA++ITE G  RD A +  +      +++  R +R +GS  LD+C V CGR +  Y  G  G    PWD AA  L +EEAGG V    G PF +    VL A++  L + + A I
Sbjct:   34 GIVDLVTETDKKCEEIIFSSIRDAFPDHKFIGEEDSAAQGFTADLTDNPTWMVDPVDGTTNFVHRFPFVCVCIGLAIDKKVAVGVVYNPILDELYTAMRGKGAFLNGQPINVSGCTDLGSALIITEIGVTRDDATLDALFGRISAIVKGARSVRCMGSCALDMCSVACGRAEVSYEVGFGG----PWDVAAASLIVEEAGGHVADPAGGPFDIMGRRVLAASNAGLVEQVAALI 263          
BLAST of mRNA_A-nodosum_M_contig992.10.1 vs. uniprot
Match: A0A2R6XTS7_MARPO (Inositol-1-monophosphatase n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XTS7_MARPO)

HSP 1 Score: 212 bits (540), Expect = 2.830e-62
Identity = 119/250 (47.60%), Postives = 154/250 (61.60%), Query Frame = 1
Query:  253 LATDVALLAGAAMKLVINVKNKNVLHKGVTDLVTETDKANEKLIFDAVRKMFPEDKLIGEESSADVGTIPALTDAPTWIVDPVDGTTNFVHGFPMTCVSIGFGRGGKMEIGVVYDPCSDELFQAVRGFGSFVNGERTSTSGCSDLGSAIVITEYGYQRDPAAVKIMMEVTEKVLRQCRGIRQVGSGCLDLCWVGCGRVDAVYA-GVAGEGWHPWDYAAGWLFIEEAGGVVIQVDGTPFHVQSASVLGAAS 999
            +A + A++AG  ++ V   K+K V HKG  DLVTETDKA EK+IFD + K FP  KL+GEE S+  G I A+TD PTWIVDP+DGTTNFVH FP  CVSIG   G    +GVVY+P  DEL+ A +G G+F+NG+    S  +D+G+A++ TE G  RD   V          L + R +R  GS  ++LC V CGR+D  Y  G  G    PWD AAG L ++EAGG+V    G+PF + S  V    S
Sbjct:   14 VAEEAAVMAGKLIQ-VSFYKHKTVEHKGKVDLVTETDKACEKIIFDHLSKAFPTHKLLGEEESSLSGKINAITDEPTWIVDPLDGTTNFVHSFPFVCVSIGLTIGKVPVVGVVYNPILDELYTATKGGGAFLNGQLIMASDQTDIGNALLATEVGTARDVQTVDESTNRINAALFKVRSLRMSGSCAMNLCGVACGRLDIFYEIGFGG----PWDVAAGVLIVQEAGGLVFDPSGSPFDIMSHRVCSTNS 258          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig992.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTH8_ECTSI6.660e-15981.32Inositol-1-monophosphatase n=2 Tax=Ectocarpus TaxI... [more]
A0A835YVI1_9STRA2.830e-10757.54Inositol-1-monophosphatase n=1 Tax=Tribonema minus... [more]
W7TWA1_9STRA1.170e-7448.69Inositol-1-monophosphatase n=2 Tax=Monodopsidaceae... [more]
A0A7R9U8Z7_9STRA2.410e-7450.80Inositol-1-monophosphatase n=1 Tax=Pinguiococcus p... [more]
A0A7S1TRK1_9STRA4.990e-7053.15Inositol-1-monophosphatase n=1 Tax=Phaeomonas parv... [more]
K8Z378_NANGC1.840e-6949.60Myo-inositol-1(Or 4)-monophosphatase n=1 Tax=Nanno... [more]
A0A6H5KD97_9PHAE1.240e-6444.98Inositol-1-monophosphatase n=2 Tax=Ectocarpus TaxI... [more]
A0A8J9RK04_9CHLO1.010e-6346.79Inositol monophosphatase 2 n=1 Tax=Coccomyxa sp. O... [more]
I0Z0E2_COCSC1.610e-6348.29Inositol-1-monophosphatase n=1 Tax=Coccomyxa subel... [more]
A0A2R6XTS7_MARPO2.830e-6247.60Inositol-1-monophosphatase n=2 Tax=Marchantia poly... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig992contigA-nodosum_M_contig992:212932..217903 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LTH8
PFAMsInositol_P
Model size1368
Max annot lvl2759|Eukaryota
KEGG rclassRC00078
KEGG koko:K01092
KEGG ReactionR01185,R01186,R01187
KEGG Pathwayko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070
KEGG ModuleM00131
Hectar predicted targeting categoryother localisation
Exons7
Evalue2.99e-162
EggNOG OGsCOG0483@1|root,KOG2951@2759|Eukaryota
Ec32 ortholog descriptionInositol monophosphatase
Ec32 orthologEc-02_005670.1
EC3.1.3.25
DescriptionInositol-1-monophosphatase
Cds size873
COG categoryG
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig992.10.1prot_A-nodosum_M_contig992.10.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig992 213262..217738 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870533.6269314-UTR-A-nodosum_M_contig992:212931..2132611680870533.6269314-UTR-A-nodosum_M_contig992:212931..213261Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig992 212932..213261 -
1680870533.8063114-UTR-A-nodosum_M_contig992:217738..2179031680870533.8063114-UTR-A-nodosum_M_contig992:217738..217903Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig992 217739..217903 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870533.6394658-CDS-A-nodosum_M_contig992:213261..2133541680870533.6394658-CDS-A-nodosum_M_contig992:213261..213354Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig992 213262..213354 -
1680870533.6495116-CDS-A-nodosum_M_contig992:213880..2140271680870533.6495116-CDS-A-nodosum_M_contig992:213880..214027Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig992 213881..214027 -
1680870533.6594296-CDS-A-nodosum_M_contig992:214995..2150911680870533.6594296-CDS-A-nodosum_M_contig992:214995..215091Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig992 214996..215091 -
1680870533.6698558-CDS-A-nodosum_M_contig992:215694..2158231680870533.6698558-CDS-A-nodosum_M_contig992:215694..215823Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig992 215695..215823 -
1680870533.685201-CDS-A-nodosum_M_contig992:216255..2163961680870533.685201-CDS-A-nodosum_M_contig992:216255..216396Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig992 216256..216396 -
1680870533.7737176-CDS-A-nodosum_M_contig992:216983..2170681680870533.7737176-CDS-A-nodosum_M_contig992:216983..217068Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig992 216984..217068 -
1680870533.795662-CDS-A-nodosum_M_contig992:217556..2177381680870533.795662-CDS-A-nodosum_M_contig992:217556..217738Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig992 217557..217738 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig992.10.1

>prot_A-nodosum_M_contig992.10.1 ID=prot_A-nodosum_M_contig992.10.1|Name=mRNA_A-nodosum_M_contig992.10.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=291bp
MYWCTHPRTPPALKYCRNKCEKALLERLRLATDVALLAGAAMKLVINVKN
KNVLHKGVTDLVTETDKANEKLIFDAVRKMFPEDKLIGEESSADVGTIPA
LTDAPTWIVDPVDGTTNFVHGFPMTCVSIGFGRGGKMEIGVVYDPCSDEL
FQAVRGFGSFVNGERTSTSGCSDLGSAIVITEYGYQRDPAAVKIMMEVTE
KVLRQCRGIRQVGSGCLDLCWVGCGRVDAVYAGVAGEGWHPWDYAAGWLF
IEEAGGVVIQVDGTPFHVQSASVLGAASKDLADTLVATIR*
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mRNA from alignment at A-nodosum_M_contig992:212932..217903-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig992.10.1 ID=mRNA_A-nodosum_M_contig992.10.1|Name=mRNA_A-nodosum_M_contig992.10.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=4972bp|location=Sequence derived from alignment at A-nodosum_M_contig992:212932..217903- (Ascophyllum nodosum dioecious)
AAGGCACGCACCGCAGAAAGAAGGTGGATGAGAAATCCTGTGTGACCTTC CTCATGTGTGACCCCGGCTGGTACGTCCAATGAACTTGATGTCCAGAATG AATGGGAACAAAACACACACACACACACACTGCTGTATGAATTTCTACCC GGGTGTACCTGTATCATGTACTGGTGCACACATCCGCGGACGCCTCCTGC CCTAAAATATTGCAGAAATAAGTGTGAGAAAGCCTTGCTGGAGCGATTAC GATTAGCGACAGATGTTGCACTGCTAGCAGGAGCGGCGATGAAGCTAGTG ATCAACGTCAAGAACAAGAACGTTCTCCACAAGGGCGTCACCGACCTGTG AGCTCCCTAATCTCGTTCATGTTGTCTTGAGCGCCCAAAAATACACTCTT TATTTATTTATTTATTTGGGGGGGGGGGGGGGAGACTGATGGGTCGAAAA ACCGATGGTGCTTCGCTCGAGAGATGGATGCTTCGTGTGAATCGCTCGTG TCCAATTCTCGTCAGAAGTGCGTGACGTTGGAACATCAGTGAAACTTGTT TTCGAGATGACAGGCAGCGTTACCACTCTGCCTGTGGTGGACCAGACTCG GTCGACGCACTGATTGCAGCAGGAAGATCAGATCGGGCGCTCCAAACATA AGCGTCGATGTTGGTGTGTGTTCAAGCGAATTATTTGCACAAACGACCGA TCAAGTACCCCCAACCATGAAGTATGCCAGGTATGGTATGGAATTGTGAC TTGAACTTTTTATGTATCCATGCTTTCCTTCCTCTGTCCTGTGCATCCGA ATCGCGCACGCCTCGTGGGGTCGAACCAAACCCAGCGTAACGGAAACGGA CAAGGCGAACGAAAAGCTGATCTTCGATGCCGTGAGAAAGATGTTCCCGG AAGATAAACTCATAGGAGAGGTACGCACGCTGCGCTCGTGCTTACCGTAA AGCTCTCTCTCTGATCGGAAGTACCCTACCCTATTTGGGAGGGGCGGTCT CATGGCGTCATTACAAACGCAGGTGGTGGGAGTTCGATTTTCCGTCCCAG AGGGTAAGTAGGCATCCTAGCAGGAACCCACGGAACAATATCCTCGATTT CCCCGCGCGCCGCACCCACCTTCGCCCTGATTCTGATCGGGAAAAGTGCC GGAAATATTCCGCACCATTTCTCCCCAACCACCCCGTACTATTATAGTAC TATTACTATTTAATAGGCGATATCTCCCTCTTGCTCCCCTTCTACAGTGA ATACCATCCGCGTGCGGGGTCGAACAAACACAAGATACTGTTCTGTACCA CCCAGTCGTGGCTAGTCGTGGCTTTCATGCAGTATGTAGTACCACGATGC GGCGCCGGACACTCCTTTTACTTGCCTTGCCTTTTACTTGCCTTGCCTTG TCTTGCCCCCCCCCCCAAAAAAAAACACTCAACTCTTGAAAAATGATTTA CGCCGCTGCTCTGTCGCTTCGGGCTTGACGGTCGGCTCCGCTGACCCACT TCTACAGGAATCTAGCGCGGACGTCGGAACCATCCCCGCTCTGACGGATG CCCCCACCTGGATCGTGGACCCGGTGGACGGCACCACGAATTTCGTGCAC GGGTTTCCCATGACCTGCGTGTCCATCGGGTTCGGGCGCGGCGGGAAGGT GAGCGAGAGAGAGAGTGAAGGTCTTGGTTCGTGACGCACAAGGAAGGACG GCTGTCGTTTATTGAAAGCCGTCGTGTCGATCGCGTCGAGTGATGCGGTC CTTTCTGGACCCGACCAACGGCTGTGGATTCTACGCGGAGGACGTGCGTC TTCTCTCGTCGAGGGAATCATGAAAAGCCTCCGTTTTTCCGCAAGAAGAT TGGTTGTACGCACGCGCTACTTATTCACACCCAGGAAAGGGCTTGTCCTG TACGGACGACCGACCAGCTAGCTGCCCAGTGTGTCGCCCTTTAAAAGGCG TCTGCCTGGACACAGGTGACGAGTGTTTTTTTTTCTAGTCCTACGAAGAA GCAAACAAGGAACCGTTTTTGCTTGTCCGCTCATGATTTATTCCCGTGTG TGACACCCGCGACGGCGTGACCTGCCCCAGATGGAGATCGGCGTCGTGTA CGACCCGTGCTCGGACGAGCTATTCCAGGCGGTGCGCGGGTTCGGGTCCT TTGTGAACGGCGAGCGGACATCGACCTCGGGCTGCAGCGACCTGGGCAGC GCGATCGTGGTGGGTATGGCAATGAGGCGGTGGCGACGATGACGAAAAAT ATCAACCCTTGGCGGTGACTCCTCAATAACTCACGTACGCCCGTCAATCA ACCCGGTCGTCTTAGAAAGCAAGGTTGGATACCAGAAGCAGGATCAACTC CATAACAGCCCTCTCCCTACGGTGGAAATGTTGAGACTGAATGTTTACTA ATGATAGGTTCCTCCTATTAATAGTAGCGTGTACAGTATCTATCGTGTGT CTCATCACGGTTTTTGCGTCGACGTTTTACGTTCTTCGAGAAGGGTCATT TCAATTCGTGCGCTCATCATTACCAGCACACGCAAGCACCGTAGAGGCAG ACGCGCGCTCGAGCTTTCGCCTTGCTGTGCGGCATGCCTCGCCTGTGCTA CCCTTGATGACCGAAGAAGAGAACGAGAGAAGGAAAATCGATCAGCATCA AGAAAAACTACACACTACAACCAGCAGTCGGCGGTACGAAAAAACTTGTA AAATAAACACGTTTTTTATTTTTACTTTTTTGGTGGACAAAAAGAAAAAA AGCGGAGGCGTTTCTGCTCGGTGCCCCCCCCTTTTTGTACAAACAAAAAC GAAAAAAAACAGATCACCGAGTACGGTTACCAGAGAGATCCCGCCGCCGT CAAAATCATGATGGAGGTAACGGAGAAGGTCCTTCGACAGTGCAGGGGCA TTCGCCAGGTGGGTTTCATCTGTCGCAGCACGAGAGGATAGGATAATGAT GGATGATAGGATAATTTGGACGGAAGTTAGGGGGGAGGGGTGGCGACTTT GATTGTTGAGTACGGTTCCATGGAGCAGACGTTGCCATGGCTCGCGGGAA AGGGCTTGAAGGAAGACATCAGGCGCTGGAAGCCGCGCCGCTGTGTGTTG CTCCGTAGGAGAGCATGTATCCACACAGGCGAGTCCACCTTGTCGTCGAT AGGTCTTAGGGGTTTAGGGAGAGGGAAAATGGTCTCTTAACGAAGAGCGC GGAGAAGAAGAGAACCAAGTATTATTAGTTTAATAGTACACGTGGAAGCA AAGAAGCGCGCGTAACCTTGTAACGACGAAAAAAAAAGGCCCGAAAAATC TTGCGAGAAATTTCCCCTGGGTAAGAACGGCCGGGATAACGAGGGACGGT CTCCTAAACGGGGCGCATCCACGAGTGTTCTCGATGTGTGGCCGAAACCT CTTGGTGCCCCGTTTGCGAAGCACGCGCTCCTTGTTATAATCCTGTATCC GTAAGAACGCTTTTCGCTGTGTACCAGCCGGATGTTGGCGGGACAATCCT TGAGTGTAGGCATAGATAATTGTTGAAGCAGGAGCGAGTGACGGCGTGTT GATTATGTGACTTTGGTGTCTGCTGGCCCTTGGGTTTTGACTAGATTGAA CCTCGGAAGATCGCTCCCGTGGGCGGTTTTCAACGCTCTTTAGGCGTTTC TTGTGCTTGAAAAATAACAGCCCGCCCGGCTCCCACGAAACAGTCAAACA AAAAAACGGCAGTTATTACCTCATCCGGTATAACATCAGGAACACGTTCG CCGCCCTCGCCCTCGACAGGATAGGAGTTCCCGTATAATATGGCGCTACT CGAGGCCTTTTTTTTTCTTCTATTTCACGTCACGAAGCTCGCCGTCGTTT CACGTGTTGATTCCCTGTCAATGCAGGTTGGGAGCGGTTGCCTCGACTTG TGCTGGGTGGGCTGCGGAAGGGTAGACGCGGTGTACGCGGGCGTTGCGGG CGAAGGGTGGCACCCTTGGGACTACGCGGCGGGATGGCTGTTCATCGAAG AGGCTGGCGGAGTTGTCATTCAAGTGAGCGCTTGTGCTGAAGTGAGGAAA TCGGCTTGAGGCCAAGGGAAGAACCGATGAGACGGATCCATTTGTAAGGC ACGGCCGCGAGATTTTTGCTCCACCGGAGCAAAGTTATTTTTACCCGGAA CAAGCCTGAGAGCCATTCGTGTAGTAGTTGCGTAGCTCGTCCGCTCAAAG CTGAAAAACGCTGGCCATACCCCATGAAAAAAACTCTATGCATGTGCGGC GGTTATCGAACGGCCGTCCCTTGTTTTACACCCGGGGACTCCGCGCCCCG ATTCCTGTGTCGTATTTCCGGCGACGTTGGCGAGGCCAAAAGCGTCTCCT ACGCCCGCAAGTAGAAACGTTTCCCTCCGTCCCCCGAAACCGTGGGCAAC CGTTAGAGAATCATCCCAGTATATCATAGGAAAACTGTACATTTGAGCTT AACCTTCCCTCGCCCCCCCACAATAAATAATTAAGCAATGAAGCCCGTCT CAACACCTGGACTTCCCCCGCGTGCGCAATTATTTTGTTATTTTGGAAGG TGGACGGAACCCCCTTTCACGTCCAAAGCGCAAGCGTCCTGGGCGCGGCA AGCAAAGATCTCGCCGACACGCTTGTAGCCACCATCCGGTAGCCTCGCGT CGACCTCTTCAGCATCCTAAACGAATGCTGCTGCTTTTTTGCTTGGCGGG CGGCCACCATCGTCAAAAGAGTGCGTCAAGACTTTCGTCGAACCGAGGAG AGAGTCCCAAACCACGAGAGGCAGCGCAGGCGACTAAATTGTACTAAGAA GTTTACTAAGGCGAGCGGGAGGTTGGTAGAAGCGTTGTATAACATTTAGT GTTTTTTCCGTGACGCCAGGTCGTCTTTACCAGAGCCTTCAGATGCCGTG AATTGGCGACGCGCGTGAGGGGTCCCTGGGCACGAGGTTTTCTGTTTTCC TTGAAGTCAGCACCTACGAAGA
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Coding sequence (CDS) from alignment at A-nodosum_M_contig992:212932..217903-

>mRNA_A-nodosum_M_contig992.10.1 ID=mRNA_A-nodosum_M_contig992.10.1|Name=mRNA_A-nodosum_M_contig992.10.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=873bp|location=Sequence derived from alignment at A-nodosum_M_contig992:212932..217903- (Ascophyllum nodosum dioecious)
ATGTACTGGTGCACACATCCGCGGACGCCTCCTGCCCTAAAATATTGCAG
AAATAAGTGTGAGAAAGCCTTGCTGGAGCGATTACGATTAGCGACAGATG
TTGCACTGCTAGCAGGAGCGGCGATGAAGCTAGTGATCAACGTCAAGAAC
AAGAACGTTCTCCACAAGGGCGTCACCGACCTCGTAACGGAAACGGACAA
GGCGAACGAAAAGCTGATCTTCGATGCCGTGAGAAAGATGTTCCCGGAAG
ATAAACTCATAGGAGAGGAATCTAGCGCGGACGTCGGAACCATCCCCGCT
CTGACGGATGCCCCCACCTGGATCGTGGACCCGGTGGACGGCACCACGAA
TTTCGTGCACGGGTTTCCCATGACCTGCGTGTCCATCGGGTTCGGGCGCG
GCGGGAAGATGGAGATCGGCGTCGTGTACGACCCGTGCTCGGACGAGCTA
TTCCAGGCGGTGCGCGGGTTCGGGTCCTTTGTGAACGGCGAGCGGACATC
GACCTCGGGCTGCAGCGACCTGGGCAGCGCGATCGTGATCACCGAGTACG
GTTACCAGAGAGATCCCGCCGCCGTCAAAATCATGATGGAGGTAACGGAG
AAGGTCCTTCGACAGTGCAGGGGCATTCGCCAGGTTGGGAGCGGTTGCCT
CGACTTGTGCTGGGTGGGCTGCGGAAGGGTAGACGCGGTGTACGCGGGCG
TTGCGGGCGAAGGGTGGCACCCTTGGGACTACGCGGCGGGATGGCTGTTC
ATCGAAGAGGCTGGCGGAGTTGTCATTCAAGTGGACGGAACCCCCTTTCA
CGTCCAAAGCGCAAGCGTCCTGGGCGCGGCAAGCAAAGATCTCGCCGACA
CGCTTGTAGCCACCATCCGGTAG
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